##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933753.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 672418 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.288787629123554 33.0 31.0 34.0 30.0 34.0 2 32.51857178124322 34.0 31.0 34.0 31.0 34.0 3 32.56077320952146 34.0 31.0 34.0 31.0 34.0 4 36.0571311297437 37.0 35.0 37.0 35.0 37.0 5 36.13291583509067 37.0 35.0 37.0 35.0 37.0 6 36.13984009946194 37.0 36.0 37.0 35.0 37.0 7 36.144625813110295 37.0 37.0 37.0 35.0 37.0 8 36.073665487836436 37.0 37.0 37.0 35.0 37.0 9 37.9045444946447 39.0 38.0 39.0 35.0 39.0 10 37.43594460588503 39.0 37.0 39.0 34.0 39.0 11 37.3910216561722 39.0 37.0 39.0 34.0 39.0 12 37.37585846898804 39.0 37.0 39.0 34.0 39.0 13 37.38311437231008 39.0 37.0 39.0 34.0 39.0 14 38.62588003295569 40.0 38.0 41.0 34.0 41.0 15 38.65327370772347 40.0 38.0 41.0 34.0 41.0 16 38.74750229767793 40.0 38.0 41.0 34.0 41.0 17 38.724121008063435 40.0 38.0 41.0 34.0 41.0 18 38.30534132042866 39.0 38.0 41.0 35.0 41.0 19 37.870153684166695 38.0 37.0 41.0 35.0 41.0 20 37.25222406300843 38.0 35.0 40.0 34.0 41.0 21 37.16010725471359 38.0 35.0 40.0 33.0 41.0 22 37.15623763789785 38.0 35.0 40.0 33.0 41.0 23 37.01613728365392 38.0 35.0 40.0 33.0 41.0 24 36.91754682355321 38.0 35.0 40.0 33.0 41.0 25 36.846519575621116 38.0 35.0 40.0 33.0 41.0 26 36.835557644203455 38.0 35.0 40.0 33.0 41.0 27 36.74977171937694 38.0 35.0 40.0 33.0 41.0 28 36.645689139791024 38.0 35.0 40.0 33.0 41.0 29 36.437602800638885 38.0 35.0 40.0 33.0 41.0 30 36.1195729442103 38.0 35.0 40.0 31.0 41.0 31 35.6810614825897 38.0 35.0 40.0 30.0 41.0 32 35.08736083805014 38.0 35.0 40.0 25.0 41.0 33 34.22135487152337 38.0 34.0 40.0 18.0 41.0 34 33.53857719454268 38.0 33.0 40.0 15.0 41.0 35 33.09029353765069 38.0 33.0 40.0 10.0 41.0 36 32.76355035112088 37.0 33.0 40.0 10.0 41.0 37 32.59932958368158 37.0 32.0 40.0 10.0 41.0 38 32.451000716816026 37.0 32.0 40.0 9.0 41.0 39 32.40629489394989 37.0 31.0 40.0 9.0 41.0 40 32.25315651871306 37.0 31.0 40.0 8.0 41.0 41 32.095688991074006 37.0 31.0 40.0 8.0 41.0 42 31.857506788931886 37.0 30.0 40.0 8.0 41.0 43 31.702316118842745 36.0 30.0 40.0 8.0 41.0 44 31.55248372292235 36.0 29.0 40.0 7.0 41.0 45 31.49628802322365 36.0 29.0 40.0 7.0 41.0 46 31.297126192338695 35.0 28.0 40.0 7.0 41.0 47 31.24755881014488 35.0 28.0 40.0 7.0 41.0 48 31.131901585025982 35.0 27.0 40.0 7.0 41.0 49 31.109491417540873 35.0 27.0 40.0 7.0 41.0 50 30.9399926831227 35.0 27.0 40.0 7.0 41.0 51 30.220093751208324 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 0.0 8 2.0 9 3.0 10 5.0 11 14.0 12 12.0 13 10.0 14 21.0 15 29.0 16 49.0 17 113.0 18 244.0 19 532.0 20 975.0 21 1582.0 22 2495.0 23 4345.0 24 8336.0 25 16673.0 26 26428.0 27 28656.0 28 25072.0 29 20750.0 30 18446.0 31 18058.0 32 19588.0 33 23055.0 34 33952.0 35 46397.0 36 61039.0 37 66171.0 38 113899.0 39 135422.0 40 44.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.116085530131556 3.875119345407172 37.595513504992425 39.41328161946884 2 43.59594775868582 3.8458220928053684 38.79670086166641 13.76152928684241 3 16.484389174590806 4.291973147655178 64.5936010041373 14.630036673616708 4 13.175732951824608 4.174486703211396 64.87423001763784 17.775550327326155 5 12.792489195708622 4.882825861294612 65.08198769217957 17.242697250817198 6 15.37272946292336 5.4008072359752415 66.47531743647552 12.751145864625874 7 61.1107971529614 1.718722580299754 33.95031066985119 3.2201695968876503 8 62.34172791329203 1.9435827119440585 32.434586819508105 3.280102555255808 9 57.53266569306592 4.633873572688417 33.985854037220896 3.847606697024767 10 23.86357890478839 25.69398796581888 39.18202665603835 11.260406473354372 11 19.539780315220593 18.7352212463081 46.37993034094864 15.34506809752267 12 16.227108732960748 18.238952556296827 49.576900082984096 15.95703862775833 13 17.23942547641497 18.03402050510248 50.90895841574735 13.817595602735203 14 15.85799309358167 19.260192320848045 50.82969224500237 14.052122340567921 15 13.55466391441038 18.674098551793676 51.86848061771101 15.902756916084934 16 15.282904383880263 19.904583161069453 49.325865756121935 15.486646698928345 17 15.020418846610292 19.64581554925656 48.97132438453462 16.362441219598523 18 16.32317992677174 17.80306297570856 49.86674955161819 16.00700754590151 19 15.977859010317989 19.90844980354482 48.89875047961239 15.21494070652481 20 16.889196898357866 22.064400417597387 47.35863703827084 13.687765645773908 21 15.545241204131955 23.341730887632394 47.878254300152584 13.234773608083067 22 15.283499251953398 20.279944915216426 48.094637561754745 16.341918271075432 23 13.45085943564866 22.844569895511423 46.94550116147991 16.759069507360007 24 13.371444547885392 22.17043565163336 47.78798307005464 16.67013673042661 25 14.173624144505354 23.753825745295337 45.34545476177021 16.727095348429103 26 14.579919038455246 22.798318902825326 45.92485626500183 16.696905793717598 27 14.579026736345547 22.094441255290608 47.41738026049273 15.909151747871118 28 12.81881210794476 22.311270667947618 47.44176985149118 17.428147372616436 29 15.141623216511157 21.11543712393184 46.67885154769801 17.064088111858993 30 17.376542567272143 20.776511039264268 46.95026010606498 14.89668628739861 31 17.618951307073875 23.13322962799925 43.829136043353984 15.41868302157289 32 16.793423138583442 23.419509888194547 43.23679615953172 16.550270813690293 33 17.20997950679488 23.41326377342665 41.29142884336826 18.085327876410208 34 17.177559196809128 23.746389894381174 41.52952478963978 17.546526119169922 35 18.096332935763172 25.41930763304968 38.74881398177919 17.735545449407958 36 18.96751722886657 26.18564642826337 38.58998420625266 16.256852136617404 37 18.17634269159957 26.20795398100586 38.85142872439465 16.764274602999922 38 17.649587012840225 28.132054763554816 37.24677209711816 16.971586126486798 39 19.303915124223327 26.111436636140017 36.72537023101702 17.85927800861964 40 21.810540467387845 24.808229404923722 36.40741324592739 16.973816881761046 41 20.337647118310336 25.15087341504838 34.434533281381526 20.076946185259764 42 21.329292196223182 24.980294995077468 35.6775101201931 18.01290268850626 43 19.980577557412204 25.087371248241418 37.20765952130966 17.724391673036713 44 19.08217804996297 25.824858941908158 36.56445841723452 18.528504590894354 45 20.422861969786652 24.564630928975724 35.69044850078374 19.322058600453886 46 19.970167366132376 24.878721271589992 36.54586878994911 18.605242572328525 47 17.611218022123143 27.28511134443159 37.670913033262046 17.43275760018322 48 17.7147250668483 26.61067966651696 37.93443958966 17.74015567697474 49 20.170340472741657 24.199828083126864 37.773527775877504 17.85630366825397 50 18.14570698583322 24.37650390084739 36.75377518150912 20.724013931810273 51 17.4000398561609 23.591872912384858 35.61846946393464 23.389617767519606 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 744.0 1 1710.5 2 2677.0 3 33114.5 4 63552.0 5 39922.5 6 16293.0 7 15559.0 8 14825.0 9 15339.0 10 15853.0 11 15542.0 12 15231.0 13 14683.0 14 14135.0 15 13386.5 16 12638.0 17 11749.5 18 10861.0 19 10150.0 20 9439.0 21 9041.0 22 8643.0 23 8448.5 24 8254.0 25 8162.0 26 8193.0 27 8316.0 28 9015.5 29 9715.0 30 10260.0 31 10805.0 32 12103.5 33 13402.0 34 14539.0 35 15676.0 36 16687.0 37 17698.0 38 18620.0 39 19542.0 40 22074.0 41 24606.0 42 27652.5 43 30699.0 44 33154.0 45 35609.0 46 40704.5 47 45800.0 48 49487.5 49 53175.0 50 51930.0 51 50685.0 52 44618.5 53 38552.0 54 33129.5 55 27707.0 56 23987.5 57 20268.0 58 17735.5 59 15203.0 60 13160.0 61 11117.0 62 9532.0 63 7947.0 64 6667.5 65 5388.0 66 4308.5 67 3229.0 68 2514.5 69 1800.0 70 1596.0 71 1392.0 72 1153.5 73 915.0 74 919.5 75 764.0 76 604.0 77 441.0 78 278.0 79 179.0 80 80.0 81 57.0 82 34.0 83 30.0 84 26.0 85 14.5 86 3.0 87 2.5 88 2.0 89 3.0 90 4.0 91 2.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 672418.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.92602290524307 #Duplication Level Percentage of deduplicated Percentage of total 1 75.70376274228497 33.25365216230696 2 9.217624270413852 8.097871496682467 3 4.248258377958888 5.5982728445283865 4 2.668706282570634 4.68902613182255 5 1.7798562247233702 3.909100264761912 6 1.259147210912209 3.3185597536561575 7 0.9344437997299918 2.8732479825421393 8 0.7153890375025231 2.51393561979965 9 0.5887019994089492 2.3273403759359907 >10 2.7482067060043147 19.48177922510365 >50 0.08992101505511015 2.762516880810905 >100 0.042576234662277716 3.324176569082632 >500 0.0023842691410874725 0.7425460578070383 >1k 6.812197545964207E-4 0.7744143451962986 >5k 0.0 0.0 >10k+ 3.4060987729821033E-4 6.333560289963238 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 42332 6.295488817967396 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCC 3315 0.4929969156090408 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGC 1861 0.2767623710251659 No Hit CCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCGTCTTCTGC 984 0.1463375459907379 No Hit CTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCGTCTTCTGCT 750 0.11153776371245266 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGTTATGCGTCGTATGCCG 729 0.10841470632850399 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 678 0.10083013839605721 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 677 0.10068142137777394 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12016335077288234 0.0 2 0.0 0.0 0.0 0.43901263797221374 0.0 3 0.0 0.0 0.0 0.7044725156078511 0.0 4 0.0 0.0 0.0 1.097382877912251 0.0 5 0.0 0.0 0.0 1.9357007099750452 0.0 6 0.0 0.0 0.0 2.894925477902138 0.0 7 0.0 0.0 0.0 3.836899071708372 0.0 8 0.0 0.0 0.0 5.181895785062268 0.0 9 0.0 0.0 0.0 5.939460276197246 0.0 10 0.0 0.0 0.0 7.219913803616203 0.0 11 1.4871701828327022E-4 0.0 0.0 9.742451867737033 0.0 12 1.4871701828327022E-4 0.0 0.0 11.856166848597152 0.0 13 1.4871701828327022E-4 0.0 0.0 12.60733650794595 0.0 14 1.4871701828327022E-4 0.0 0.0 12.912355112444937 0.0 15 2.9743403656654044E-4 0.0 0.0 13.253809386423326 0.0 16 2.9743403656654044E-4 0.0 0.0 13.98430738023075 0.0 17 2.9743403656654044E-4 0.0 0.0 14.94115267586531 0.0 18 2.9743403656654044E-4 0.0 0.0 15.853680300051456 0.0 19 2.9743403656654044E-4 0.0 0.0 16.41999470567415 0.0 20 2.9743403656654044E-4 0.0 0.0 16.98853986657109 0.0 21 2.9743403656654044E-4 0.0 0.0 17.590248922545204 0.0 22 2.9743403656654044E-4 0.0 0.0 18.146896721979484 0.0 23 2.9743403656654044E-4 0.0 0.0 18.568063317757705 0.0 24 2.9743403656654044E-4 0.0 0.0 18.839620593142957 0.0 25 2.9743403656654044E-4 0.0 0.0 19.04261932309962 0.0 26 2.9743403656654044E-4 0.0 0.0 19.228069444898857 0.0 27 2.9743403656654044E-4 0.0 0.0 19.402514507345135 0.0 28 2.9743403656654044E-4 0.0 0.0 19.590344101436905 0.0 29 2.9743403656654044E-4 0.0 0.0 19.774158336035025 0.0 30 2.9743403656654044E-4 0.0 0.0 19.9966389953868 0.0 31 2.9743403656654044E-4 0.0 0.0 20.15442775178535 0.0 32 2.9743403656654044E-4 0.0 0.0 20.375867392009138 0.0 33 2.9743403656654044E-4 0.0 0.0 20.528004901712922 0.0 34 2.9743403656654044E-4 0.0 0.0 20.69337822604392 0.0 35 2.9743403656654044E-4 0.0 0.0 20.861428456704015 0.0 36 2.9743403656654044E-4 0.0 0.0 21.0108890600787 0.0 37 2.9743403656654044E-4 0.0 0.0 21.172544458952615 0.0 38 2.9743403656654044E-4 0.0 0.0 21.387143116335373 0.0 39 2.9743403656654044E-4 0.0 0.0 21.737669128429044 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACCCG 25 3.8890714E-5 45.000004 23 TTCGTAA 20 7.031197E-4 45.0 20 TCTCGTC 20 7.031197E-4 45.0 42 GCGATCC 20 7.031197E-4 45.0 9 TCGTACG 20 7.031197E-4 45.0 30 GCTACGA 45 3.8380676E-10 45.0 10 CTACGGC 30 2.1641536E-6 44.999996 12 CGTCGAG 30 2.1641536E-6 44.999996 20 CGTTTTT 18110 0.0 44.3788 1 TACGAAT 50 1.0804797E-9 40.500004 12 TACGGGA 95 0.0 40.263157 4 CGAATAT 45 1.9263098E-8 40.0 14 GTTTTTT 20625 0.0 39.883633 2 GGCGCGA 40 3.4553705E-7 39.375 8 CGCTTTG 80 0.0 39.375 1 GTTGGGC 345 0.0 39.130432 4 GCGGGCA 110 0.0 38.86364 5 GCCATAC 35 6.2444233E-6 38.571426 17 ATATCGT 35 6.2444233E-6 38.571426 16 ACGCGCC 35 6.2444233E-6 38.571426 32 >>END_MODULE