##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933752.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1874881 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.390945345331254 33.0 31.0 34.0 31.0 34.0 2 32.57746384970566 34.0 31.0 34.0 31.0 34.0 3 32.660949148239276 34.0 31.0 34.0 31.0 34.0 4 36.15651500015201 37.0 35.0 37.0 35.0 37.0 5 36.15415751719709 37.0 35.0 37.0 35.0 37.0 6 36.11551613142381 37.0 35.0 37.0 35.0 37.0 7 36.17532099370573 37.0 36.0 37.0 35.0 37.0 8 36.04796677762482 37.0 36.0 37.0 35.0 37.0 9 37.87537182359841 39.0 38.0 39.0 35.0 39.0 10 37.40223726199156 39.0 37.0 39.0 34.0 39.0 11 37.320573945759755 39.0 37.0 39.0 34.0 39.0 12 37.30141699659872 39.0 37.0 39.0 34.0 39.0 13 37.30184209024466 39.0 37.0 39.0 34.0 39.0 14 38.51874598974548 40.0 38.0 41.0 34.0 41.0 15 38.56228048606818 40.0 38.0 41.0 34.0 41.0 16 38.59935377231942 40.0 38.0 41.0 34.0 41.0 17 38.52306679730607 40.0 38.0 41.0 34.0 41.0 18 38.19339414074813 39.0 38.0 41.0 34.0 41.0 19 37.85642715457674 39.0 37.0 41.0 34.0 41.0 20 37.46736032846885 39.0 35.0 41.0 34.0 41.0 21 37.34482508489872 39.0 35.0 41.0 33.0 41.0 22 37.367646799983575 39.0 35.0 41.0 33.0 41.0 23 37.29416053605536 39.0 35.0 40.0 33.0 41.0 24 37.243919480756375 39.0 35.0 41.0 33.0 41.0 25 37.16083367424386 39.0 35.0 40.0 33.0 41.0 26 37.107622830462304 38.0 35.0 40.0 33.0 41.0 27 37.01676639744069 38.0 35.0 40.0 33.0 41.0 28 36.84557046553888 38.0 35.0 40.0 33.0 41.0 29 36.67000785649863 38.0 35.0 40.0 32.0 41.0 30 36.44955226491708 38.0 35.0 40.0 31.0 41.0 31 36.09532658339383 38.0 35.0 40.0 30.0 41.0 32 35.50656975029349 38.0 35.0 40.0 27.0 41.0 33 34.92226173287798 38.0 34.0 40.0 23.0 41.0 34 34.32295276340205 38.0 34.0 40.0 19.0 41.0 35 33.951330777793366 38.0 33.0 40.0 16.0 41.0 36 33.781245316369414 38.0 33.0 40.0 15.0 41.0 37 33.70691579892271 38.0 33.0 40.0 15.0 41.0 38 33.67680348779469 38.0 33.0 40.0 15.0 41.0 39 33.7007324731543 38.0 33.0 40.0 15.0 41.0 40 33.60496266163026 38.0 33.0 40.0 13.0 41.0 41 33.4644065410018 38.0 33.0 40.0 12.0 41.0 42 33.31446155782687 38.0 33.0 40.0 10.0 41.0 43 33.16755570086848 38.0 33.0 40.0 10.0 41.0 44 32.937082406830086 37.0 33.0 40.0 10.0 41.0 45 32.9423440741039 37.0 33.0 40.0 10.0 41.0 46 32.81967015506584 37.0 32.0 40.0 10.0 41.0 47 32.75202266170493 37.0 32.0 40.0 10.0 41.0 48 32.694406204980474 37.0 31.0 40.0 10.0 41.0 49 32.70788012679205 37.0 32.0 40.0 10.0 41.0 50 32.628267607384146 36.0 31.0 40.0 10.0 41.0 51 31.652236061915396 35.0 29.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 7.0 11 11.0 12 9.0 13 20.0 14 35.0 15 61.0 16 136.0 17 231.0 18 462.0 19 890.0 20 1718.0 21 2902.0 22 4760.0 23 7866.0 24 14824.0 25 30155.0 26 51543.0 27 62360.0 28 58994.0 29 51293.0 30 47171.0 31 49345.0 32 55121.0 33 70726.0 34 105181.0 35 131080.0 36 171840.0 37 227746.0 38 362470.0 39 365814.0 40 102.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.41421242201505 3.574573532933557 42.85728000870455 32.15393403634684 2 36.21781862422201 4.048683623120614 43.57833910525522 16.155158647402153 3 18.441170399614695 4.557622590447074 60.23438287549984 16.766824134438398 4 15.226939736441938 4.344489063572568 60.15565787908672 20.272913320898766 5 15.130346939352417 5.081282492062162 59.36051408062698 20.427856487958433 6 17.93415155415197 6.033076232571561 60.52896157142773 15.503810641848737 7 67.66136090770561 1.9422566018856664 26.028585280879156 4.367797209529565 8 68.80484681427781 2.4905047307002417 24.442297937842454 4.26235051717949 9 62.7204606585698 4.877642901069454 26.978885593272317 5.423010847088428 10 28.822682612923167 24.971238174582812 32.107157734277536 14.098921478216484 11 22.504148263276445 18.92893468972164 41.309288429505656 17.257628617496255 12 19.23972774805441 18.455784660466453 43.76272414089214 18.541763450587 13 19.115026500348556 17.397584166675113 46.29792504164264 17.18946429133369 14 17.153195322796485 18.995018883865164 45.923181257903835 17.928604535434516 15 15.48988975833666 18.870050952567123 47.11984387275779 18.520215416338424 16 17.895055739537604 19.994708997531045 44.652113920830175 17.45812134210118 17 17.514444916770717 20.331637047897974 44.025834172942176 18.128083862389133 18 18.575418919920782 18.93928201309843 44.25390198097906 18.231397086001724 19 18.037464777764562 21.739939761510197 42.301618076027225 17.920977384698013 20 19.528066047925176 22.757337665697182 40.31759882360534 17.396997462772305 21 18.840022380087056 24.42224333171012 40.202871542247216 16.53486274595561 22 18.301694880901774 21.207052607605494 40.89246197492001 19.59879053657272 23 16.534382715489677 23.30718589606487 40.52310519974334 19.63532618870211 24 16.553370587253273 21.945286127492892 41.729955127818776 19.77138815743506 25 17.597703534250975 23.490397523896185 39.50602731586698 19.405871625985863 26 17.283656936093543 22.684053014564658 40.24682099823936 19.785469051102446 27 17.33480684907469 21.720365185843796 40.953852537841065 19.99097542724045 28 16.39432049287395 22.228397428956825 40.83843187914326 20.538850199025966 29 17.851426303856087 21.66308155024239 39.86349000283218 20.622002143069345 30 19.22591353797921 21.29820505941444 40.44550027441742 19.030381128188935 31 19.14345497127551 22.526976378767504 38.19522412355771 20.134344526399275 32 18.202541921327274 22.539937201347712 38.0845504328008 21.17297044452421 33 17.831585044597496 22.22413049148186 38.11137880217464 21.832905661746 34 16.82949477860195 22.831262357450953 38.28418976991073 22.055053094036367 35 16.295380880173195 24.195295594760413 37.25831132749225 22.251012197574138 36 16.60590725491378 24.806801071641345 35.599432710662704 22.98785896278217 37 16.726608248736856 23.549174587613827 35.0045149532157 24.71970221043362 38 16.615881221261507 23.94109279468937 35.59777927239116 23.845246711657968 39 17.502870848869875 22.561485235596283 34.49242911950145 25.443214796032386 40 19.138441319742427 22.73557628457486 34.27316187000669 23.85282052567603 41 17.668428022898517 23.582083342889497 32.88875400625426 25.860734627957722 42 18.815220806013823 24.241218509334725 33.3388092364262 23.604751448225247 43 18.611314531428928 23.34244146695177 34.96051216050512 23.085731841114182 44 19.70125037269032 24.100409572660876 34.01874572306189 22.17959433158691 45 20.0503391948609 22.850516912806732 34.23646620772198 22.862677684610382 46 19.797789833061405 23.629393012143172 33.93964736961973 22.6331697851757 47 18.36916582972466 24.39808179825813 34.75041882658152 22.482333545435683 48 18.519788722590928 23.543787579051685 35.19066010056105 22.74576359779634 49 19.889849009083775 22.125990929557663 34.862852629046856 23.121307432311706 50 18.329483311207483 22.216076646997863 35.497719588603225 23.95672045319143 51 18.006316134197316 21.458428561599376 34.93363045441284 25.601624849790465 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1060.0 1 2369.5 2 3679.0 3 59123.0 4 114567.0 5 73771.0 6 32975.0 7 31703.5 8 30432.0 9 30464.5 10 30497.0 11 29784.5 12 29072.0 13 27696.5 14 26321.0 15 24878.5 16 23436.0 17 22068.0 18 20700.0 19 19071.0 20 17442.0 21 16713.0 22 15984.0 23 15801.5 24 15619.0 25 16006.0 26 17671.5 27 18950.0 28 20927.0 29 22904.0 30 24939.5 31 26975.0 32 30493.5 33 34012.0 34 37496.0 35 40980.0 36 43895.5 37 46811.0 38 51028.0 39 55245.0 40 60072.0 41 64899.0 42 72477.0 43 80055.0 44 92037.5 45 104020.0 46 124195.5 47 144371.0 48 157675.5 49 170980.0 50 169460.5 51 167941.0 52 149253.5 53 130566.0 54 112947.5 55 95329.0 56 83855.0 57 72381.0 58 65390.5 59 58400.0 60 52257.0 61 46114.0 62 40639.5 63 35165.0 64 30931.0 65 26697.0 66 22392.5 67 18088.0 68 15022.0 69 11956.0 70 10051.0 71 8146.0 72 6820.5 73 5495.0 74 4994.0 75 3730.0 76 2967.0 77 2270.0 78 1573.0 79 1117.5 80 662.0 81 477.0 82 292.0 83 224.0 84 156.0 85 103.5 86 51.0 87 36.0 88 21.0 89 14.5 90 8.0 91 4.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1874881.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.25072637524322 #Duplication Level Percentage of deduplicated Percentage of total 1 73.22901235013741 27.27833901784275 2 8.566547116536825 6.38220205237484 3 4.048572548431353 4.524368046358123 4 2.571716054466494 3.831931642390058 5 1.868724727704549 3.480567675118652 6 1.524131567614557 3.4065004791048223 7 1.2383913040965073 3.229168293006573 8 1.0399133403119165 3.0990021835139503 9 0.9117113409575821 3.056571872569527 >10 4.816109228472432 27.405488108790166 >50 0.10413491681738812 2.678272478591603 >100 0.07400798048299277 5.194896454113356 >500 0.004302565695872627 1.0648050212817466 >1k 0.0025815394175235764 1.631105418932969 >5k 0.0 0.0 >10k+ 1.434188565290876E-4 3.736781256010826 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 69945 3.730636771080405 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCC 4097 0.21852053543664907 No Hit CTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGCT 2371 0.1264613594142775 TruSeq Adapter, Index 16 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTGC 2154 0.11488729151343471 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGC 2118 0.11296716964970044 No Hit CGCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCTTCTG 1987 0.10598005953444511 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCATCTTCCCTCGTATGCCGTCT 1887 0.10064638769073878 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.13926217183917272 0.0 2 0.0 0.0 0.0 0.40658580464573485 0.0 3 0.0 0.0 0.0 0.684843464731895 0.0 4 0.0 0.0 0.0 1.0900958514167032 0.0 5 0.0 0.0 0.0 2.042849652857968 0.0 6 0.0 0.0 0.0 3.6747932268767993 0.0 7 0.0 0.0 0.0 5.191422815634699 0.0 8 0.0 0.0 0.0 7.273474956543908 0.0 9 0.0 0.0 0.0 8.839280999700781 0.0 10 1.0667343687412695E-4 0.0 0.0 10.781910958615507 0.0 11 1.0667343687412695E-4 0.0 0.0 12.89932534384849 0.0 12 1.0667343687412695E-4 0.0 0.0 14.572978231685104 0.0 13 1.0667343687412695E-4 0.0 0.0 15.35153431071092 0.0 14 1.0667343687412695E-4 0.0 0.0 15.788895401894841 0.0 15 1.6001015531119043E-4 0.0 0.0 16.16363918563365 0.0 16 1.6001015531119043E-4 0.0 0.0 16.705913601983273 0.0 17 1.6001015531119043E-4 0.0 0.0 17.33566023656968 0.0 18 1.6001015531119043E-4 0.0 0.0 17.99591547410209 0.0 19 1.6001015531119043E-4 0.0 0.0 18.423195925501407 0.0 20 1.6001015531119043E-4 0.0 0.0 18.866210708839656 0.0 21 1.6001015531119043E-4 0.0 0.0 19.31850608118595 1.6001015531119043E-4 22 1.6001015531119043E-4 0.0 0.0 19.789255958111475 1.6001015531119043E-4 23 1.6001015531119043E-4 0.0 0.0 20.20133544475623 1.6001015531119043E-4 24 1.6001015531119043E-4 0.0 0.0 20.528289528775428 1.6001015531119043E-4 25 1.6001015531119043E-4 0.0 0.0 20.818707960665236 1.6001015531119043E-4 26 1.6001015531119043E-4 0.0 0.0 21.093392060616114 1.6001015531119043E-4 27 2.6668359218531737E-4 0.0 0.0 21.378743504254402 1.6001015531119043E-4 28 2.6668359218531737E-4 0.0 0.0 21.66777518146485 1.6001015531119043E-4 29 2.6668359218531737E-4 0.0 0.0 21.961020459431825 1.6001015531119043E-4 30 2.6668359218531737E-4 0.0 0.0 22.330857265074425 1.6001015531119043E-4 31 2.6668359218531737E-4 0.0 0.0 22.586980187009203 1.6001015531119043E-4 32 2.6668359218531737E-4 0.0 0.0 22.917294484289936 1.6001015531119043E-4 33 2.6668359218531737E-4 0.0 0.0 23.207552906024436 1.6001015531119043E-4 34 2.6668359218531737E-4 0.0 0.0 23.49098422779899 1.6001015531119043E-4 35 2.6668359218531737E-4 0.0 0.0 23.8214051985166 1.6001015531119043E-4 36 2.6668359218531737E-4 0.0 0.0 24.100302899224005 1.6001015531119043E-4 37 3.2002031062238086E-4 0.0 0.0 24.380694028047646 1.6001015531119043E-4 38 3.2002031062238086E-4 0.0 0.0 24.724502515092958 1.6001015531119043E-4 39 3.2002031062238086E-4 0.0 0.0 25.178077968681745 1.6001015531119043E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 34360 0.0 44.11598 1 GTTTTTT 39195 0.0 39.270954 2 AGGCACG 665 0.0 38.909775 10 TCGTTTG 470 0.0 37.81915 1 TGTTACG 30 1.1401969E-4 37.499996 1 TTGGGAC 3565 0.0 36.92146 5 CGATAAC 55 2.752131E-9 36.81818 16 TTTGGGC 4605 0.0 36.59609 4 TTGGGCG 2300 0.0 36.586956 5 TGGGCGA 3080 0.0 36.525974 6 ACGGGAC 75 1.8189894E-12 36.0 5 CTTGGGA 4520 0.0 35.990044 4 ACACGAC 620 0.0 35.927418 26 TCTGGGA 4660 0.0 35.53648 4 CACGACC 630 0.0 35.35714 27 TACACGC 1790 0.0 35.321228 35 TTTGGGA 9320 0.0 35.198498 4 ACACGCG 1640 0.0 35.121952 36 ACGACCA 615 0.0 35.121952 28 GTTTGCG 340 0.0 35.07353 1 >>END_MODULE