##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933750.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1587714 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.61264119356509 34.0 31.0 34.0 31.0 34.0 2 32.80917533006574 34.0 31.0 34.0 31.0 34.0 3 32.83813268636543 34.0 31.0 34.0 31.0 34.0 4 36.29646964125781 37.0 37.0 37.0 35.0 37.0 5 36.2976127942438 37.0 37.0 37.0 35.0 37.0 6 36.273216082997315 37.0 37.0 37.0 35.0 37.0 7 36.35854001413353 37.0 37.0 37.0 35.0 37.0 8 36.29175405646105 37.0 37.0 37.0 35.0 37.0 9 38.135293887942034 39.0 39.0 39.0 37.0 39.0 10 37.57008252115935 39.0 38.0 39.0 35.0 39.0 11 37.454814280153734 39.0 37.0 39.0 34.0 39.0 12 37.52557513506841 39.0 37.0 39.0 35.0 39.0 13 37.58247581113475 39.0 37.0 39.0 35.0 39.0 14 38.97733722824136 40.0 38.0 41.0 35.0 41.0 15 39.025370438252736 40.0 38.0 41.0 35.0 41.0 16 39.02456865657165 40.0 38.0 41.0 35.0 41.0 17 38.95061138215069 40.0 38.0 41.0 35.0 41.0 18 38.42887698918067 39.0 38.0 41.0 35.0 41.0 19 37.91192494366114 38.0 37.0 41.0 35.0 41.0 20 37.32825244345014 38.0 35.0 41.0 34.0 41.0 21 37.24820213212203 38.0 35.0 41.0 34.0 41.0 22 37.23813545764539 38.0 35.0 41.0 34.0 41.0 23 37.14287081930373 38.0 35.0 40.0 34.0 41.0 24 37.04205354364829 38.0 35.0 40.0 33.0 41.0 25 36.99514459153223 38.0 35.0 40.0 33.0 41.0 26 36.950870874729326 38.0 35.0 40.0 33.0 41.0 27 36.879479553622375 38.0 35.0 40.0 33.0 41.0 28 36.72751767635733 38.0 35.0 40.0 33.0 41.0 29 36.57690049971217 38.0 35.0 40.0 33.0 41.0 30 36.339489353876075 38.0 35.0 40.0 33.0 41.0 31 35.89319738945427 38.0 35.0 40.0 31.0 41.0 32 35.12606363614606 38.0 35.0 40.0 24.0 41.0 33 34.112156849407384 38.0 34.0 40.0 17.0 41.0 34 33.19835058455112 38.0 33.0 40.0 12.0 41.0 35 32.58985245453526 38.0 32.0 40.0 9.0 41.0 36 32.247477820312724 38.0 31.0 40.0 8.0 41.0 37 32.04419183807663 38.0 30.0 40.0 7.0 41.0 38 31.899649433084296 38.0 30.0 40.0 7.0 41.0 39 31.790101365863123 38.0 29.0 40.0 7.0 41.0 40 31.648255290310473 37.0 28.0 40.0 7.0 41.0 41 31.48672934798081 37.0 27.0 40.0 7.0 41.0 42 31.33045939004128 37.0 26.0 40.0 7.0 41.0 43 31.17689709859584 37.0 24.0 40.0 7.0 41.0 44 31.01544169793804 37.0 24.0 40.0 7.0 41.0 45 30.978845056477425 37.0 23.0 40.0 7.0 41.0 46 30.84685340054947 36.0 23.0 40.0 7.0 41.0 47 30.758632222176033 36.0 23.0 40.0 7.0 41.0 48 30.660807299047562 36.0 23.0 40.0 7.0 41.0 49 30.60952413343965 36.0 23.0 40.0 7.0 41.0 50 30.509514937828854 36.0 23.0 40.0 7.0 41.0 51 29.723467828588777 35.0 22.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 5.0 11 7.0 12 6.0 13 17.0 14 33.0 15 44.0 16 94.0 17 253.0 18 557.0 19 1123.0 20 2142.0 21 3392.0 22 5595.0 23 9775.0 24 20160.0 25 43563.0 26 74675.0 27 82098.0 28 68218.0 29 52918.0 30 43676.0 31 40478.0 32 40527.0 33 46680.0 34 67207.0 35 87180.0 36 109533.0 37 140385.0 38 272073.0 39 375173.0 40 125.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 17.89113152620686 3.161904473979571 40.35103299460734 38.59593100520623 2 43.46928980912179 3.1656205084794866 39.9196580744391 13.445431607959621 3 15.275862025528527 3.404769372821553 67.66602801260177 13.653340589048154 4 12.717970616874325 3.578793157961698 67.87582650275806 15.827409722405925 5 12.792921143228567 4.488213872271706 66.7601973655205 15.958667618979236 6 15.462923423236175 5.180404027425594 67.74091555532041 11.615756994017815 7 62.28590287671457 1.2958253186657043 33.88066112662608 2.537610677993644 8 64.92649179890081 1.4557407694332858 31.82178906276571 1.7959783689001925 9 60.48797201511103 3.965323729588578 32.93855190544393 2.6081523498564603 10 25.8065369455708 23.52533264807138 39.547613738998336 11.120516667359487 11 18.489853966142515 20.381567461142247 47.77151300549091 13.357065567224325 12 15.201100450081059 19.461628479688407 50.77482468505033 14.562446385180202 13 15.85102858575285 18.59182447216564 52.25242077603397 13.304726166047537 14 15.489880419269467 19.5123932899754 51.32454585649556 13.67318043425957 15 15.263643200223717 19.755321172452973 51.55443612640563 13.426599500917671 16 16.94007862877067 19.29856384714124 50.364864200983305 13.39649332310479 17 16.780667047087825 19.346746328368962 50.017824368872475 13.854762255670733 18 17.26488523751759 18.62640248810554 50.00314918177959 14.105563092597281 19 17.115110152080288 20.431198565988584 48.505776229220125 13.947915052711005 20 18.258137170800282 20.591365951298535 47.92626379813997 13.224233079761216 21 18.451622899338293 20.804187655963226 47.9621644704273 12.782024974271186 22 17.77536760398913 19.142868299958305 48.43460472100139 14.647159375051174 23 15.779479175720565 21.185364618564805 48.34296353121532 14.69219267449931 24 14.95760571488316 21.09806929963457 49.138635799646536 14.805689185835735 25 15.443272528931534 22.218800111355065 47.86422491708204 14.473702442631357 26 15.881008796294546 21.956662220021993 47.70500228630597 14.457326697377487 27 15.52080538434504 21.298357260816495 48.392027783341334 14.788809571497133 28 15.15600416699733 21.396359797797338 48.39221673424811 15.055419300957226 29 16.26413825159947 20.503251845105606 47.93401078531776 15.298599117977169 30 16.820787622959802 20.38975533376918 47.845014908226545 14.944442135044472 31 16.989898684523787 21.363671290925193 46.596616267161465 15.049813757389554 32 16.897501691110616 21.734833855467674 45.73348852501143 15.63417592841028 33 17.51499325445263 22.843093907340993 43.15178930210352 16.49012353610285 34 17.514174467189935 24.5352752447859 41.11074160711564 16.839808680908526 35 17.734113322676503 25.670933178141652 39.241387302751 17.353566196430844 36 18.16744073554809 27.096756720668836 37.42689174498682 17.308910798796255 37 18.078696792999242 27.13127175297314 37.358932402183264 17.431099051844352 38 18.102378639981758 27.707005165917792 36.77702659295062 17.41358960114983 39 18.396575201831062 27.059848310212043 36.24512979037786 18.298446697579035 40 18.962987036708125 27.101984362422954 36.19575062007389 17.73927798079503 41 18.277410163291375 27.306618194460714 36.117210026490916 18.298761615756995 42 18.726924370510055 27.62827562142804 35.68495333542439 17.959846672637518 43 18.470266055473466 27.11092803867699 36.17849310392174 18.240312801927804 44 18.652981582325282 27.387489182560586 35.70397439337311 18.25555484174102 45 18.878022112294783 26.984330931137475 35.52491191738562 18.61273503918212 46 18.61160133374147 27.273866703952983 35.477359272513816 18.63717268979174 47 18.080775252973773 27.302524258147248 36.004406335146 18.61229415373298 48 18.303611355697562 27.032072526916057 36.06613029802597 18.598185819360413 49 18.934455449785037 26.605673313959567 35.59167457111293 18.868196665142463 50 18.06628901678766 26.685095678440828 36.01303509322208 19.235580211549436 51 17.824809757928694 26.163717143011905 35.754802187295695 20.256670911763706 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 687.0 1 1891.5 2 3096.0 3 63822.5 4 124549.0 5 82585.0 6 40621.0 7 39640.5 8 38660.0 9 38549.0 10 38438.0 11 37931.5 12 37425.0 13 36288.0 14 35151.0 15 33799.0 16 32447.0 17 30668.0 18 28889.0 19 27182.0 20 25475.0 21 24449.5 22 23424.0 23 22831.5 24 22239.0 25 22448.5 26 23679.0 27 24700.0 28 26557.0 29 28414.0 30 31139.5 31 33865.0 32 37691.5 33 41518.0 34 44614.0 35 47710.0 36 53196.5 37 58683.0 38 61963.0 39 65243.0 40 68986.0 41 72729.0 42 76131.5 43 79534.0 44 82815.0 45 86096.0 46 90216.5 47 94337.0 48 96036.0 49 97735.0 50 93898.5 51 90062.0 52 82797.5 53 75533.0 54 68330.5 55 61128.0 56 54236.5 57 47345.0 58 41454.5 59 35564.0 60 30951.5 61 26339.0 62 22203.5 63 18068.0 64 14637.0 65 11206.0 66 8864.5 67 6523.0 68 5204.5 69 3886.0 70 3233.0 71 2580.0 72 2191.5 73 1803.0 74 1605.5 75 1221.5 76 1035.0 77 781.5 78 528.0 79 387.5 80 247.0 81 165.5 82 84.0 83 54.5 84 25.0 85 18.5 86 12.0 87 8.5 88 5.0 89 6.5 90 8.0 91 4.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1587714.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.64511671912669 #Duplication Level Percentage of deduplicated Percentage of total 1 75.22196519012164 32.078494853748225 2 8.61979159639972 7.351840374460269 3 4.078372335206729 5.2176799277684465 4 2.491596474349467 4.250176898623902 5 1.7848891281298136 3.8058402599898087 6 1.305241527443403 3.3397306370685076 7 1.066260847544992 3.182957280761379 8 0.8574904928545712 2.925422572265973 9 0.7217697474574492 2.7701959612191764 >10 3.7627770706138715 24.6546582381726 >50 0.05374524901827346 1.6166205640067242 >100 0.032993379683463345 2.751219141782742 >500 0.001775406386698059 0.5118159090720427 >1k 0.001183604257798706 0.7067753714774435 >5k 0.0 0.0 >10k+ 1.4795053222483825E-4 4.836572009582788 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 76657 4.828136553560654 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGCATACTCGTATGCC 2066 0.1301241911326599 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1689 0.10637936051455112 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.5193454236720214E-4 0.0 0.0 0.04547418489727999 0.0 2 2.5193454236720214E-4 0.0 0.0 0.13812311285281859 0.0 3 2.5193454236720214E-4 0.0 0.0 0.22926043355415396 0.0 4 2.5193454236720214E-4 0.0 0.0 0.3521415065937568 0.0 5 2.5193454236720214E-4 0.0 0.0 0.6082329689100178 0.0 6 2.5193454236720214E-4 0.0 0.0 1.0807991867552973 0.0 7 2.5193454236720214E-4 0.0 0.0 1.5403907756686657 0.0 8 2.5193454236720214E-4 0.0 0.0 2.174006149722179 0.0 9 2.5193454236720214E-4 0.0 0.0 2.599082706331241 0.0 10 3.149181779590027E-4 0.0 0.0 3.1015031674470337 0.0 11 3.149181779590027E-4 0.0 0.0 3.7373859523818522 0.0 12 3.149181779590027E-4 0.0 0.0 4.262921407759836 0.0 13 3.149181779590027E-4 0.0 0.0 4.5318615317368245 0.0 14 3.149181779590027E-4 0.0 0.0 4.678046549945393 0.0 15 3.149181779590027E-4 0.0 0.0 4.800171819357894 0.0 16 3.149181779590027E-4 0.0 0.0 4.9774077699132215 0.0 17 3.149181779590027E-4 0.0 0.0 5.192056000010077 0.0 18 3.149181779590027E-4 0.0 0.0 5.425788271691249 0.0 19 3.149181779590027E-4 0.0 0.0 5.582617524314832 0.0 20 3.149181779590027E-4 0.0 0.0 5.742218056904455 0.0 21 3.149181779590027E-4 0.0 0.0 5.9053456730872185 0.0 22 3.149181779590027E-4 0.0 0.0 6.077983818244344 0.0 23 3.149181779590027E-4 0.0 0.0 6.256353474240323 0.0 24 3.149181779590027E-4 0.0 0.0 6.407514199660644 0.0 25 3.149181779590027E-4 0.0 0.0 6.54903842883542 0.0 26 3.149181779590027E-4 0.0 0.0 6.693396921611827 0.0 27 3.149181779590027E-4 0.0 0.0 6.842542170693211 0.0 28 3.149181779590027E-4 0.0 0.0 6.994521683376226 0.0 29 3.779018135508032E-4 0.0 0.0 7.1594758249911505 0.0 30 3.779018135508032E-4 0.0 0.0 7.347041091783533 0.0 31 3.779018135508032E-4 0.0 0.0 7.512247167940826 0.0 32 3.779018135508032E-4 0.0 0.0 7.692758267546926 0.0 33 3.779018135508032E-4 0.0 0.0 7.866845036322663 0.0 34 3.779018135508032E-4 0.0 0.0 8.046600332301661 0.0 35 3.779018135508032E-4 0.0 0.0 8.233976648187268 0.0 36 3.779018135508032E-4 0.0 0.0 8.424124244038914 0.0 37 4.4088544914260377E-4 0.0 0.0 8.62019230163619 0.0 38 4.4088544914260377E-4 0.0 0.0 8.838367615326186 0.0 39 5.038690847344043E-4 0.0 0.0 9.093640290379753 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGCGA 20 7.0341E-4 45.0 43 CGTTTTT 46000 0.0 44.486412 1 GTTTTTT 51990 0.0 40.001442 2 CGATAGT 35 6.2497948E-6 38.571426 10 AGTGCGC 65 9.094947E-12 38.07692 13 TGGGCGA 2600 0.0 36.692307 6 CGTTTGG 925 0.0 36.243244 2 TATAGCG 25 0.0021073502 36.0 1 CCGCGCA 25 0.0021073502 36.0 24 GCGTTTG 370 0.0 35.87838 1 GTTTGCG 315 0.0 35.714287 1 CTTTGCG 300 0.0 35.25 1 TTGGGCG 2020 0.0 35.08663 5 TTGGGAT 5335 0.0 35.04686 5 CTTACGG 90 0.0 35.0 2 ACGACCA 460 0.0 34.72826 28 CCGCTTG 65 3.6743586E-10 34.615383 1 TTGGGAC 3030 0.0 34.60396 5 GCGATCT 515 0.0 34.51456 9 GGCGATC 900 0.0 34.500004 8 >>END_MODULE