##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933749.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1619841 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.52682269432617 34.0 31.0 34.0 31.0 34.0 2 32.74139251938925 34.0 31.0 34.0 31.0 34.0 3 32.7753081938289 34.0 31.0 34.0 31.0 34.0 4 36.21256592468026 37.0 37.0 37.0 35.0 37.0 5 36.26449694753991 37.0 37.0 37.0 35.0 37.0 6 36.25881861244406 37.0 37.0 37.0 35.0 37.0 7 36.278276695058345 37.0 37.0 37.0 35.0 37.0 8 36.236545438718984 37.0 37.0 37.0 35.0 37.0 9 38.09267637996569 39.0 39.0 39.0 37.0 39.0 10 37.569803456018214 39.0 38.0 39.0 35.0 39.0 11 37.45009541059894 39.0 37.0 39.0 34.0 39.0 12 37.49984041643594 39.0 37.0 39.0 35.0 39.0 13 37.56494557181847 39.0 37.0 39.0 35.0 39.0 14 38.976197046500246 40.0 38.0 41.0 35.0 41.0 15 39.01725539728899 40.0 38.0 41.0 35.0 41.0 16 39.06441187746205 40.0 38.0 41.0 35.0 41.0 17 39.01598675425551 40.0 38.0 41.0 35.0 41.0 18 38.52810985769591 39.0 38.0 41.0 35.0 41.0 19 38.04363391221731 39.0 37.0 41.0 35.0 41.0 20 37.41333007375415 39.0 35.0 41.0 34.0 41.0 21 37.36350975188306 38.0 35.0 41.0 34.0 41.0 22 37.3348983017469 38.0 35.0 41.0 34.0 41.0 23 37.18853517104456 38.0 35.0 41.0 34.0 41.0 24 37.097401535088935 38.0 35.0 41.0 34.0 41.0 25 37.05346574139067 38.0 35.0 41.0 33.0 41.0 26 37.03989774305009 38.0 35.0 41.0 34.0 41.0 27 36.96849937740803 38.0 35.0 40.0 33.0 41.0 28 36.87904553595075 38.0 35.0 40.0 33.0 41.0 29 36.68449495969049 38.0 35.0 40.0 33.0 41.0 30 36.36970850842768 38.0 35.0 40.0 33.0 41.0 31 35.92456481839884 38.0 35.0 40.0 31.0 41.0 32 35.23826721264618 38.0 35.0 41.0 24.0 41.0 33 34.17566045062448 38.0 34.0 41.0 18.0 41.0 34 33.295606791036896 38.0 33.0 41.0 12.0 41.0 35 32.7317378680994 38.0 33.0 41.0 10.0 41.0 36 32.37960268939976 38.0 31.0 41.0 8.0 41.0 37 32.19798486394652 38.0 31.0 41.0 7.0 41.0 38 32.05058335972481 38.0 30.0 41.0 7.0 41.0 39 31.97086010293603 38.0 30.0 41.0 7.0 41.0 40 31.8279923770296 38.0 29.0 41.0 7.0 41.0 41 31.67332040613863 38.0 28.0 40.0 7.0 41.0 42 31.47266799642681 37.0 27.0 40.0 7.0 41.0 43 31.35386559545042 37.0 25.0 40.0 7.0 41.0 44 31.20300140569352 37.0 24.0 40.0 7.0 41.0 45 31.138327774145733 37.0 24.0 40.0 7.0 41.0 46 30.981630913157527 37.0 23.0 40.0 7.0 41.0 47 30.948003538618913 37.0 23.0 40.0 7.0 41.0 48 30.81419596120854 36.0 23.0 40.0 7.0 41.0 49 30.753078234221753 36.0 24.0 40.0 7.0 41.0 50 30.604868008650232 36.0 23.0 40.0 7.0 41.0 51 29.916383151185826 35.0 23.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 11.0 11 7.0 12 9.0 13 16.0 14 31.0 15 48.0 16 101.0 17 259.0 18 532.0 19 1152.0 20 2110.0 21 3475.0 22 5615.0 23 9695.0 24 19896.0 25 43801.0 26 74722.0 27 82710.0 28 68997.0 29 53803.0 30 44539.0 31 40754.0 32 40839.0 33 46429.0 34 67429.0 35 87995.0 36 110242.0 37 138271.0 38 269537.0 39 406612.0 40 196.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.02355910240573 3.289582125653073 40.26142071968792 38.42543805225328 2 43.42154569491697 3.2245140109430492 39.88545789370685 13.46848240043313 3 15.421637061909163 3.493120621097997 67.33537427438866 13.749868042604183 4 12.949295640744987 3.668261267618241 67.48983387875724 15.892609212879535 5 12.921823808633071 4.509578409238931 66.57647262910372 15.992125153024277 6 15.512386709559767 5.249774514906093 67.53539390594509 11.702444869589053 7 62.322289656824346 1.3733446677791215 33.696208455027374 2.6081572203691596 8 64.99366295827801 1.507370167812767 31.652983224896765 1.845983649012465 9 60.57576021350244 4.043421545694917 32.72598977307032 2.654828467732327 10 25.847969029059026 23.62991182467909 39.3984965191028 11.123622627159085 11 18.58972578172796 20.449167541752555 47.608561581044064 13.35254509547542 12 15.27205447942113 19.555993458617234 50.617684081338844 14.55426798062279 13 15.92335297106321 18.662695906573546 52.06930803702339 13.344643085339857 14 15.573503819202008 19.576118890681247 51.134524931768 13.715852358348751 15 15.268720818895186 19.83361329908306 51.42486206979574 13.472803812226013 16 16.933452110423183 19.453020389038183 50.142575721938144 13.470951778600494 17 16.81183523568054 19.424005195571663 49.8677339319106 13.896425636837195 18 17.300216502730823 18.684241231083792 49.841681992244915 14.173860273940466 19 17.13038501927041 20.460773619139164 48.40925745181163 13.999583909778798 20 18.353529760019658 20.70005636355667 47.70548467411307 13.240929202310598 21 18.470269612881758 20.855688922554744 47.853338691883955 12.82070277267954 22 17.85712301392544 19.1760178931142 48.24461166250268 14.72224743045768 23 15.878965898504854 21.283385221142076 48.12472335247719 14.712925527875884 24 15.077035338653607 21.146581670670145 48.90912132734015 14.867261663336093 25 15.475222568140948 22.29490425294828 47.739438623914324 14.490434554996448 26 16.00712662539101 21.953883128035407 47.590967261601605 14.448022984971981 27 15.61480416905116 21.405866378243296 48.18942106046211 14.789908392243436 28 15.19105887553161 21.430621894371114 48.26905850635958 15.1092607237377 29 16.307032603817287 20.570846150949386 47.829015316935426 15.293105928297901 30 16.94530512562653 20.49028268823915 47.63127986018381 14.93313232595051 31 17.024448695890523 21.394075097494138 46.40424584882096 15.177230357794377 32 16.872767141960228 21.853626374440456 45.58064649555111 15.69295998804821 33 17.592467408838274 22.930028317594132 43.01619726874428 16.461307004823315 34 17.564810373363805 24.587783615799328 40.96358840157768 16.88381760925918 35 17.79575896646646 25.703880812993376 39.1475459628445 17.352814257695663 36 18.24395110384291 27.112722791928345 37.39428746401653 17.24903864021222 37 18.157893274710297 27.15920883592896 37.35959270076508 17.32330518859567 38 18.134928057753815 27.682902210772536 36.766695002781134 17.415474728692505 39 18.420635111717758 27.01894815602272 36.28214127189027 18.278275460369258 40 18.98359159942241 27.18643373022414 36.21732009499698 17.61265457535647 41 18.322045188385776 27.365648850720536 36.14681934831875 18.165486612574938 42 18.707515120311193 27.670246647664804 35.7219011001697 17.9003371318543 43 18.484036396164807 27.181741911706148 36.13712703901185 18.197094653117187 44 18.727949224646125 27.440903150370932 35.69010785626491 18.14103976871804 45 18.912164835931428 27.044259282238198 35.448849609313505 18.59472627251687 46 18.632137351752426 27.372069233955678 35.48206274566454 18.513730668627353 47 18.065785469067645 27.443002121813194 35.97859296066713 18.51261944845204 48 18.363592476051664 27.14729408627143 36.033104483711675 18.456008953965235 49 18.910930146847747 26.662123010838716 35.629793294527055 18.79715354778648 50 18.07541604392036 26.731018661708156 35.97649398922486 19.217071305146614 51 17.845516936538832 26.1680621740035 35.77097999124605 20.215440898211614 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 664.0 1 1851.5 2 3039.0 3 64675.0 4 126311.0 5 84231.5 6 42152.0 7 40550.0 8 38948.0 9 39184.0 10 39420.0 11 38712.5 12 38005.0 13 36961.5 14 35918.0 15 34314.0 16 32710.0 17 30868.5 18 29027.0 19 27339.0 20 25651.0 21 24642.0 22 23633.0 23 23138.0 24 22643.0 25 22514.0 26 23695.0 27 25005.0 28 26846.5 29 28688.0 30 31664.0 31 34640.0 32 38270.0 33 41900.0 34 45626.0 35 49352.0 36 54925.0 37 60498.0 38 63588.0 39 66678.0 40 70654.5 41 74631.0 42 78060.0 43 81489.0 44 84632.0 45 87775.0 46 92487.5 47 97200.0 48 98831.5 49 100463.0 50 95971.5 51 91480.0 52 84091.5 53 76703.0 54 69741.0 55 62779.0 56 55394.5 57 48010.0 58 42108.0 59 36206.0 60 31717.0 61 27228.0 62 22790.5 63 18353.0 64 14904.0 65 11455.0 66 9216.0 67 6977.0 68 5461.5 69 3946.0 70 3251.5 71 2557.0 72 2237.0 73 1917.0 74 1715.5 75 1257.0 76 1000.0 77 753.5 78 507.0 79 375.0 80 243.0 81 170.0 82 97.0 83 60.5 84 24.0 85 18.0 86 12.0 87 8.5 88 5.0 89 3.0 90 1.0 91 1.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1619841.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.4822116583649 #Duplication Level Percentage of deduplicated Percentage of total 1 75.21511627235074 31.953044893905304 2 8.57855250402342 7.288717663966385 3 3.9674375666982766 5.0563656734947315 4 2.480010543513873 4.214253312981318 5 1.821447218313175 3.868955312646014 6 1.3748301053354692 3.5043494117492116 7 1.0758048888346228 3.1991799693403324 8 0.8731838696021008 2.9675825572085244 9 0.7450231076144903 2.84852064132464 >10 3.7781898665780815 24.69624239715131 >50 0.0516212360777833 1.5067270578164496 >100 0.03540407276441836 2.848735116431296 >500 0.0020566293961665916 0.5674692236934145 >1k 0.0011752167978094808 0.7076983390171913 >5k 0.0 0.0 >10k+ 1.469020997261851E-4 4.772158429273949 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 76468 4.720710242548496 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGCATACTCGTATGCC 2076 0.12816072688615734 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1823 0.11254190997758422 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.556100876567515E-4 0.0 0.0 0.04537482382530137 0.0 2 5.556100876567515E-4 0.0 0.0 0.13698875383448128 0.0 3 5.556100876567515E-4 0.0 0.0 0.22687411912650687 0.0 4 5.556100876567515E-4 0.0 0.0 0.3510838409448829 0.0 5 5.556100876567515E-4 0.0 0.0 0.6103068140638495 0.0 6 5.556100876567515E-4 0.0 0.0 1.0604127195200024 0.0 7 5.556100876567515E-4 0.0 0.0 1.514160957773016 0.0 8 5.556100876567515E-4 0.0 0.0 2.1385432273908367 0.0 9 5.556100876567515E-4 0.0 0.0 2.555744668766873 0.0 10 5.556100876567515E-4 0.0 0.0 3.049867240056277 0.0 11 5.556100876567515E-4 0.0 0.0 3.676780622295645 0.0 12 5.556100876567515E-4 0.0 0.0 4.2013382794978025 0.0 13 5.556100876567515E-4 0.0 0.0 4.462968896329948 0.0 14 5.556100876567515E-4 0.0 0.0 4.60495814095334 0.0 15 6.17344541840835E-4 0.0 0.0 4.717932192110213 0.0 16 6.17344541840835E-4 0.0 0.0 4.894801403347612 0.0 17 6.17344541840835E-4 0.0 0.0 5.113156167796716 0.0 18 6.790789960249185E-4 0.0 0.0 5.350278206317781 0.0 19 6.790789960249185E-4 0.0 0.0 5.502638839244098 0.0 20 7.40813450209002E-4 0.0 0.0 5.663333623485268 0.0 21 7.40813450209002E-4 0.0 0.0 5.824028407726438 0.0 22 7.40813450209002E-4 0.0 0.0 5.990649699569278 0.0 23 8.025479043930855E-4 0.0 0.0 6.163444436830528 0.0 24 8.025479043930855E-4 0.0 0.0 6.302038286473796 0.0 25 8.025479043930855E-4 0.0 0.0 6.438903571399909 0.0 26 8.025479043930855E-4 0.0 0.0 6.5820657706527985 0.0 27 8.025479043930855E-4 0.0 0.0 6.721832574925564 0.0 28 8.025479043930855E-4 0.0 0.0 6.877773806194559 0.0 29 8.025479043930855E-4 0.0 0.0 7.034023709734474 0.0 30 8.025479043930855E-4 0.0 0.0 7.2134857680476046 0.0 31 8.025479043930855E-4 0.0 0.0 7.379983590982078 0.0 32 8.64282358577169E-4 0.0 0.0 7.562779309821149 0.0 33 9.87751266945336E-4 0.0 0.0 7.739648521058548 0.0 34 9.87751266945336E-4 0.0 0.0 7.91336927513256 0.0 35 9.87751266945336E-4 0.0 0.0 8.10252364275259 0.0 36 9.87751266945336E-4 0.0 0.0 8.289640773384548 0.0 37 0.0010494857211294196 0.0 0.0 8.480647174630102 0.0 38 0.0010494857211294196 0.0 0.0 8.690606053310171 0.0 39 0.0010494857211294196 0.0 0.0 8.940877530572445 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 46315 0.0 44.43647 1 CTGCGCG 135 0.0 40.000004 1 GCCGATC 90 0.0 40.0 9 CGATCCG 45 1.9292202E-8 40.0 10 GTTTTTT 52745 0.0 39.689068 2 CGATACA 30 1.1401284E-4 37.499996 25 TGGGCGA 2680 0.0 36.856342 6 TTGGGCG 2170 0.0 36.497696 5 GTTAGCG 25 0.0021073625 36.0 1 AGTGCGA 25 0.0021073625 36.0 17 TCGAAGT 25 0.0021073625 36.0 37 CTAGCGG 75 1.8189894E-12 36.0 2 GGCCGAT 540 0.0 35.833336 8 GTTTGCG 305 0.0 35.409836 1 ACACGCG 700 0.0 35.357143 36 ACGGGCG 70 2.1827873E-11 35.357143 5 TTGGGAT 5250 0.0 35.100002 5 TCTACGG 90 0.0 35.0 2 GCGATAG 90 0.0 35.0 9 CGCACGG 45 8.7028457E-7 35.0 2 >>END_MODULE