##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933748.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1526847 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.550742805271256 34.0 31.0 34.0 31.0 34.0 2 32.75412729631718 34.0 31.0 34.0 31.0 34.0 3 32.763065323506545 34.0 31.0 34.0 31.0 34.0 4 36.25531110844767 37.0 37.0 37.0 35.0 37.0 5 36.26332369910017 37.0 37.0 37.0 35.0 37.0 6 36.25004208018223 37.0 37.0 37.0 35.0 37.0 7 36.31132981890131 37.0 37.0 37.0 35.0 37.0 8 36.22750544095119 37.0 37.0 37.0 35.0 37.0 9 38.05883955628822 39.0 39.0 39.0 37.0 39.0 10 37.51342668911816 39.0 37.0 39.0 34.0 39.0 11 37.495255254783224 39.0 37.0 39.0 35.0 39.0 12 37.54699390312192 39.0 37.0 39.0 35.0 39.0 13 37.57148686148645 39.0 37.0 39.0 35.0 39.0 14 38.9404066026262 40.0 38.0 41.0 35.0 41.0 15 38.98593834221766 40.0 38.0 41.0 35.0 41.0 16 39.00420998305658 40.0 38.0 41.0 35.0 41.0 17 38.96471290181662 40.0 38.0 41.0 35.0 41.0 18 38.3841969758594 39.0 38.0 40.0 35.0 41.0 19 37.795699241639795 38.0 37.0 40.0 35.0 41.0 20 37.12218578547818 38.0 35.0 40.0 34.0 41.0 21 37.02984319974431 38.0 35.0 40.0 34.0 41.0 22 37.02347975926861 38.0 35.0 40.0 34.0 41.0 23 36.95259446427835 38.0 35.0 40.0 33.0 41.0 24 36.843725664719514 37.0 35.0 40.0 33.0 41.0 25 36.783271670311436 37.0 35.0 40.0 33.0 41.0 26 36.71741896863274 37.0 35.0 40.0 33.0 41.0 27 36.636464557352504 37.0 35.0 40.0 33.0 41.0 28 36.4808576104875 37.0 35.0 40.0 33.0 41.0 29 36.31016794741058 37.0 35.0 40.0 33.0 41.0 30 36.02583690441806 37.0 35.0 40.0 31.0 41.0 31 35.50151783381046 37.0 35.0 40.0 30.0 41.0 32 34.59651163476104 37.0 35.0 40.0 21.0 41.0 33 33.424601155191056 37.0 33.0 40.0 15.0 41.0 34 32.426195944976804 37.0 31.0 40.0 10.0 41.0 35 31.760137066778793 37.0 30.0 40.0 7.0 41.0 36 31.403589226687416 37.0 27.0 40.0 7.0 41.0 37 31.16844320354299 37.0 25.0 40.0 7.0 41.0 38 31.020624201377085 37.0 24.0 40.0 7.0 41.0 39 30.900668501821073 37.0 23.0 40.0 7.0 41.0 40 30.741699070044348 37.0 23.0 40.0 7.0 41.0 41 30.56583338081681 36.0 22.0 40.0 7.0 41.0 42 30.408271424707255 36.0 22.0 40.0 7.0 41.0 43 30.24806152810334 36.0 21.0 40.0 7.0 41.0 44 30.102180506625746 36.0 21.0 40.0 7.0 41.0 45 30.064494346846804 36.0 20.0 40.0 7.0 41.0 46 29.90385939128151 35.0 20.0 40.0 7.0 41.0 47 29.79852729186356 35.0 20.0 40.0 7.0 41.0 48 29.727643306762236 35.0 20.0 40.0 7.0 41.0 49 29.72912020654329 35.0 20.0 40.0 7.0 41.0 50 29.63086871179627 35.0 20.0 40.0 7.0 41.0 51 28.793951194847946 35.0 20.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 12.0 11 2.0 12 11.0 13 14.0 14 20.0 15 54.0 16 90.0 17 220.0 18 578.0 19 1277.0 20 2327.0 21 3803.0 22 6254.0 23 11092.0 24 22779.0 25 49602.0 26 83438.0 27 90052.0 28 72054.0 29 54423.0 30 43209.0 31 39188.0 32 38658.0 33 44055.0 34 62934.0 35 86643.0 36 109873.0 37 135486.0 38 253649.0 39 314958.0 40 88.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 16.260437358818532 2.8776950146281846 37.68773164567242 43.17413598088086 2 46.895006506873315 3.3674624896928114 37.534802111802954 12.202728891630924 3 13.909121215157775 3.3634018339755065 69.97459470398802 12.7528822468787 4 11.93623198657102 3.476117777354247 69.27773378734085 15.309916448733892 5 11.12848897106259 4.293422982132459 68.98641448684774 15.59167355995722 6 14.202339854615426 4.946599102595087 69.95750065330711 10.893560389482378 7 57.573024671103255 1.42849938467967 38.07185657764007 2.926619366577005 8 59.65024655384593 1.5506465284340867 36.309990457459065 2.4891164602609166 9 54.89240244765847 4.17042441056635 37.67201297837963 3.2651601633955467 10 23.25832254312318 20.179756059382505 44.70539615298717 11.856525244507145 11 18.124081849720373 18.485414714113464 48.790939760172435 14.599563675993732 12 14.512259578071674 16.404263164547594 53.48440282490648 15.599074432474241 13 15.757767477684403 16.459605972307635 54.660814082877984 13.121812467129976 14 14.515992761553711 17.809773998311552 54.130571039534416 13.543662200600323 15 13.462449086254221 17.752204379351696 54.84884864036803 13.936497894026054 16 14.137958813162028 17.525593592547256 53.58297196772172 14.753475626569001 17 14.485341360332765 17.497103508079068 52.2417766809641 15.775778450624065 18 14.816284801293122 17.105512209147346 53.16898156789777 14.909221421661764 19 14.99095849158429 18.609264713491267 52.01660677199483 14.383170022929606 20 15.760714727801803 19.085998793592285 51.23460307417835 13.918683404427556 21 15.752200449684873 19.28222015696399 51.50240986817932 13.463169525171809 22 15.116838818820746 18.288800384059435 50.99024329222247 15.604117504897348 23 13.748463336536012 19.414649928905778 50.611816377148465 16.225070357409745 24 13.891765186688646 19.227859765909745 51.185875205570696 15.694499841830911 25 13.977693901222585 20.200714282439563 50.09748848443885 15.724103331899006 26 13.97815236235196 20.70967163049081 50.32671904912542 14.985456958031811 27 14.234170155883334 19.884769069854414 50.933394112180196 14.947666662082055 28 13.944226238778345 19.372995460579876 50.93103631208628 15.751741988555501 29 14.951268856669989 18.804569154604227 50.300914236986415 15.94324775173937 30 16.080196640527834 19.40377785069493 49.215212788183756 15.300812720593484 31 15.603266077085653 21.388521574198332 47.4572108403789 15.551001508337114 32 15.601694210356376 21.53608056340943 46.436610871947224 16.42561435428697 33 16.472835850612405 22.049098567177982 43.94408870043953 17.53397688177008 34 16.57553114359199 22.551048009394524 42.00086845636793 18.87255239064556 35 17.874024050870847 24.133459344649463 38.80460845127246 19.187908153207232 36 18.5059799704882 25.709321235199074 37.527925194862355 18.25677359945037 37 17.57320805555501 26.514706450613584 37.878647958832815 18.033437534998594 38 17.659857209006535 26.9814853747625 37.24243490015699 18.116222516073975 39 18.109476588027484 25.774750187805328 36.930026387712715 19.18574683645447 40 19.1774290416787 25.055686653607072 36.11802623314582 19.6488580715684 41 19.277439062329098 25.337378270383343 35.02243512283811 20.362747544449444 42 19.449034513608765 25.692227184518163 35.278190938581275 19.580547363291803 43 18.32665617445625 25.7712789821115 36.84494910099047 19.057115742441777 44 18.393526004897677 25.739776153078864 36.282875756379 19.583822085644467 45 19.310644746985126 24.973294639214014 35.716610767156105 19.99944984664475 46 19.44602176904431 24.95299136062749 36.29171750673119 19.309269363597007 47 18.222192531406225 25.41426875122393 36.95006768851103 19.413471028858815 48 18.17614993512775 24.825735650002915 37.58660821942212 19.41150619544722 49 18.83554802806044 23.80710051498284 37.52772871152119 19.82962274543553 50 18.131286238896234 23.521872198065687 37.13338664581323 21.213454917224844 51 17.62488317428007 23.46371312908235 36.32734648592819 22.58405721070939 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 830.0 1 1871.5 2 2913.0 3 65608.5 4 128304.0 5 85107.5 6 41911.0 7 41524.0 8 41137.0 9 41448.5 10 41760.0 11 41038.0 12 40316.0 13 39306.5 14 38297.0 15 36301.5 16 34306.0 17 32734.5 18 31163.0 19 29112.0 20 27061.0 21 25487.0 22 23913.0 23 22665.5 24 21418.0 25 21198.5 26 20983.5 27 20988.0 28 21950.5 29 22913.0 30 23733.5 31 24554.0 32 26862.5 33 29171.0 34 31907.5 35 34644.0 36 38000.5 37 41357.0 38 44397.0 39 47437.0 40 52743.5 41 58050.0 42 64074.5 43 70099.0 44 75958.5 45 81818.0 46 90529.5 47 99241.0 48 105241.0 49 111241.0 50 107286.0 51 103331.0 52 90841.5 53 78352.0 54 68132.0 55 57912.0 56 50870.5 57 43829.0 58 38956.5 59 34084.0 60 29600.5 61 25117.0 62 21531.5 63 17946.0 64 14795.0 65 11644.0 66 9535.5 67 7427.0 68 5893.0 69 4359.0 70 3659.5 71 2960.0 72 2311.0 73 1662.0 74 1378.0 75 910.5 76 727.0 77 495.5 78 264.0 79 229.0 80 194.0 81 128.5 82 63.0 83 49.0 84 35.0 85 26.0 86 17.0 87 11.0 88 5.0 89 3.5 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1526847.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.30999731344363 #Duplication Level Percentage of deduplicated Percentage of total 1 77.1427185143422 32.63908213093557 2 8.089668917870613 6.8454774036350825 3 3.806766708580251 4.831928676388112 4 2.2167176231918972 3.7515726672764926 5 1.5787499690575677 3.339845347471245 6 1.193853585830888 3.030716520548995 7 0.9048574083131651 2.679916016034571 8 0.7606375158595351 2.5746057002017095 9 0.6288261114080103 2.3945067975866507 >10 3.556745286826442 25.023258116946966 >50 0.0721551792712206 2.1233192505843173 >100 0.043349034373976365 3.370669839976406 >500 0.002477072537066284 0.6946601924873906 >1k 0.0023222555034996414 1.5517680301769243 >5k 0.0 0.0 >10k+ 1.5481703356664276E-4 5.14867330974954 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 78602 5.147994527284004 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGCC 4442 0.29092633381078786 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGC 2390 0.15653172845740274 No Hit CCTGTCTCTTATACACATCTGACGCGATATCGCTCGTATGCCGTCTTCTGC 2026 0.13269174972999914 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1647 0.10786935429679594 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9648334115991977E-4 0.0 0.0 0.10904825434375547 0.0 2 2.6197778821322634E-4 0.0 0.0 0.39447305460206555 0.0 3 2.6197778821322634E-4 0.0 0.0 0.6388328365579524 0.0 4 2.6197778821322634E-4 0.0 0.0 0.913451053052467 0.0 5 3.274722352665329E-4 0.0 0.0 1.5568030064570975 0.0 6 3.274722352665329E-4 0.0 0.0 2.400895440080113 0.0 7 3.274722352665329E-4 0.0 0.0 3.164036737145241 0.0 8 3.274722352665329E-4 0.0 0.0 4.159224860120235 0.0 9 3.274722352665329E-4 0.0 0.0 4.772973323456771 0.0 10 3.274722352665329E-4 0.0 0.0 5.689764593308956 0.0 11 3.9296668231983954E-4 0.0 0.0 7.401789439282391 0.0 12 3.9296668231983954E-4 0.0 0.0 8.729754847735235 0.0 13 3.9296668231983954E-4 0.0 0.0 9.264713491266644 0.0 14 3.9296668231983954E-4 0.0 0.0 9.500820972893813 0.0 15 3.9296668231983954E-4 0.0 0.0 9.759131072072055 0.0 16 4.584611293731461E-4 0.0 0.0 10.295858065673903 0.0 17 4.584611293731461E-4 0.0 0.0 10.97084383700528 0.0 18 4.584611293731461E-4 0.0 0.0 11.65539179760644 0.0 19 4.584611293731461E-4 0.0 0.0 12.053991002372864 0.0 20 5.239555764264527E-4 0.0 0.0 12.414865405636583 0.0 21 5.239555764264527E-4 0.0 0.0 12.816673838308619 0.0 22 5.239555764264527E-4 0.0 0.0 13.163466935455878 0.0 23 5.239555764264527E-4 0.0 0.0 13.455768652654784 0.0 24 5.239555764264527E-4 0.0 0.0 13.664957916543045 0.0 25 5.239555764264527E-4 0.0 0.0 13.823585467306154 0.0 26 5.894500234797593E-4 0.0 0.0 13.973698739952333 0.0 27 6.549444705330658E-4 0.0 0.0 14.111302573211331 0.0 28 7.859333646396791E-4 0.0 0.0 14.25152618435246 0.0 29 7.859333646396791E-4 0.0 0.0 14.397185834599014 0.0 30 7.859333646396791E-4 0.0 0.0 14.561642391149867 0.0 31 7.859333646396791E-4 0.0 0.0 14.708349952549273 0.0 32 8.514278116929856E-4 0.0 0.0 14.858856191877772 0.0 33 8.514278116929856E-4 0.0 0.0 15.002354525371567 0.0 34 9.169222587462922E-4 0.0 0.0 15.142905608747963 0.0 35 9.169222587462922E-4 0.0 0.0 15.293280859182355 0.0 36 9.169222587462922E-4 0.0 0.0 15.439267981664175 0.0 37 9.169222587462922E-4 0.0 0.0 15.593965865604085 0.0 38 9.169222587462922E-4 0.0 0.0 15.74794331062641 0.0 39 9.169222587462922E-4 0.0 0.0 15.912465361624315 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 49435 0.0 44.599472 1 GTTTTTT 54935 0.0 40.6667 2 TCGTGCG 55 2.750312E-9 36.81818 1 CGGGTAT 240 0.0 36.562504 6 TAATGCG 25 0.0021073245 36.0 24 TGGGCGA 2015 0.0 35.843674 6 TTGGGTA 1545 0.0 35.53398 5 GGCACCG 520 0.0 35.480766 8 GCGGGAT 635 0.0 35.43307 5 TTGGGAC 2915 0.0 35.428814 5 GCACCGA 475 0.0 35.052635 9 TGGCGAT 110 0.0 34.772728 6 CGGGATC 330 0.0 34.772728 6 TTGGGTC 1215 0.0 34.629627 5 TTGGGCG 1800 0.0 34.625004 5 TACGGGA 170 0.0 34.411762 4 GCGATGC 295 0.0 34.322033 9 TGCGGGA 1325 0.0 34.301888 4 TTGGGCA 2185 0.0 34.29062 5 TAGGGCG 125 0.0 34.199997 5 >>END_MODULE