##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933746.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1785915 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.63714846451259 34.0 31.0 34.0 31.0 34.0 2 32.84223717254181 34.0 31.0 34.0 31.0 34.0 3 32.84161844208711 34.0 31.0 34.0 31.0 34.0 4 36.3091020569288 37.0 37.0 37.0 35.0 37.0 5 36.315434945112166 37.0 37.0 37.0 35.0 37.0 6 36.29862003510805 37.0 37.0 37.0 35.0 37.0 7 36.37495289529457 37.0 37.0 37.0 35.0 37.0 8 36.31012618181716 37.0 37.0 37.0 35.0 37.0 9 38.1491633140435 39.0 39.0 39.0 37.0 39.0 10 37.63142814747622 39.0 38.0 39.0 35.0 39.0 11 37.51501779200018 39.0 37.0 39.0 35.0 39.0 12 37.57798159486874 39.0 37.0 39.0 35.0 39.0 13 37.61755626667563 39.0 37.0 39.0 35.0 39.0 14 39.042761833569905 40.0 39.0 41.0 35.0 41.0 15 39.07801435118693 41.0 39.0 41.0 35.0 41.0 16 39.08066341343233 41.0 39.0 41.0 35.0 41.0 17 39.01768617207426 41.0 38.0 41.0 35.0 41.0 18 38.420672316431634 39.0 38.0 40.0 35.0 41.0 19 37.810412589624924 38.0 37.0 40.0 35.0 41.0 20 37.14456679069273 38.0 35.0 40.0 34.0 41.0 21 37.05666003141247 38.0 35.0 40.0 34.0 41.0 22 37.047461385340284 38.0 35.0 40.0 34.0 41.0 23 36.94932121629529 38.0 35.0 40.0 33.0 41.0 24 36.84082053177223 37.0 35.0 40.0 33.0 41.0 25 36.78175613061092 37.0 35.0 40.0 33.0 41.0 26 36.736915250725815 37.0 35.0 40.0 33.0 41.0 27 36.66370907909951 37.0 35.0 40.0 33.0 41.0 28 36.5044013852843 37.0 35.0 40.0 33.0 41.0 29 36.33245759176668 37.0 35.0 40.0 33.0 41.0 30 36.04934725336872 37.0 35.0 40.0 32.0 41.0 31 35.532233616941454 37.0 35.0 40.0 30.0 41.0 32 34.62572630836294 37.0 35.0 40.0 21.0 41.0 33 33.43902369373682 37.0 33.0 40.0 15.0 41.0 34 32.358302606787 37.0 31.0 40.0 10.0 41.0 35 31.646203766696622 37.0 29.0 40.0 7.0 41.0 36 31.262205648085157 37.0 25.0 40.0 7.0 41.0 37 31.020730549886192 37.0 23.0 40.0 7.0 41.0 38 30.851201764921623 37.0 23.0 40.0 7.0 41.0 39 30.71119678148176 37.0 23.0 40.0 7.0 41.0 40 30.56138674013041 36.0 22.0 40.0 7.0 41.0 41 30.40276552915452 36.0 21.0 40.0 7.0 41.0 42 30.235442896218466 36.0 21.0 40.0 7.0 41.0 43 30.071697141241323 36.0 20.0 40.0 7.0 41.0 44 29.900994168255487 36.0 19.0 40.0 7.0 41.0 45 29.861184322882107 35.0 20.0 40.0 7.0 41.0 46 29.719982194001393 35.0 20.0 40.0 7.0 41.0 47 29.625364589020194 35.0 20.0 40.0 7.0 41.0 48 29.512629660426168 35.0 20.0 40.0 7.0 41.0 49 29.458142184818428 35.0 20.0 40.0 7.0 41.0 50 29.349881153358364 35.0 18.0 40.0 7.0 41.0 51 28.623164596299375 35.0 18.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 6.0 11 2.0 12 8.0 13 21.0 14 35.0 15 50.0 16 140.0 17 336.0 18 741.0 19 1509.0 20 2772.0 21 4479.0 22 7399.0 23 13031.0 24 26798.0 25 58581.0 26 99561.0 27 107691.0 28 87646.0 29 65729.0 30 52853.0 31 47592.0 32 46626.0 33 51960.0 34 71918.0 35 93767.0 36 116251.0 37 147098.0 38 283571.0 39 397625.0 40 114.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 16.400052634083927 2.940509486733691 38.04201207784245 42.617425801339934 2 46.53810511698485 2.914080457356593 37.14667271398695 13.401141711671608 3 13.998314589440147 3.1097224671946875 69.21342841064664 13.678534532718523 4 11.767357349033968 3.3825797980307013 69.26561454492514 15.58444830801018 5 11.709963800068872 4.098739301702489 69.03570438682692 15.15559251140172 6 14.503545801451917 4.712262341712792 69.93221961851488 10.851972238320414 7 58.50496804159212 1.1912101079838626 38.02924551280436 2.2745763376196515 8 61.080286575788875 1.3104207087123407 36.03083013469286 1.5784625808059176 9 57.00181699576967 3.6906011764277693 37.038996816757795 2.2685850110447587 10 23.538858232334686 23.185985895185382 42.93541405945972 10.339741813020217 11 17.153223977624915 19.085006845230595 51.16850466007621 12.593264517068281 12 14.37783993079178 18.274161984192975 53.58485706206623 13.763141022949021 13 14.844099523213591 17.66198279313405 55.07686536033349 12.417052323318858 14 14.820190210620327 18.52495779474387 54.088240481769844 12.566611512865954 15 14.10767029785852 18.640920760506518 54.40421296646257 12.84719597517239 16 15.753717282177485 18.615331636724033 53.23573630323951 12.39521477785897 17 15.941016229775773 18.03467690231618 53.10258326964049 12.921723598267555 18 16.43224901521069 17.06402600347721 53.18108644588349 13.322638535428618 19 15.901596660535356 19.091782083693793 51.789586850438006 13.21703440533284 20 17.119851728665697 19.368838942502865 51.11850228034369 12.39280704848775 21 17.25518851681071 19.51083898169846 51.380720806981294 11.853251694509536 22 16.980595381079166 17.857064865909074 51.57692275388246 13.585416999129299 23 14.84152381272345 20.049554430082058 51.41902050209557 13.689901255098928 24 14.15873655801088 20.139984265768526 52.13294025751506 13.568338918705539 25 14.569394400069433 21.328730650674864 50.82576718376855 13.276107765487158 26 14.922378724631352 21.150950633148835 50.61293510609407 13.31373553612574 27 14.52919091894071 20.220447221732275 51.30546526570413 13.944896593622877 28 13.99389108664186 20.395427553942937 51.416836747549574 14.193844611865627 29 14.913251750503242 19.499248284492822 50.97039892716059 14.617101037843346 30 15.64648933459879 19.43250378657439 50.53891142635568 14.382095452471141 31 15.707466480767563 20.400690962335833 49.125854253981856 14.765988302914753 32 15.529462488416302 20.969922980656975 47.94287522082518 15.557739310101546 33 16.11969214660272 22.553089032792712 45.021571575354926 16.30564724524963 34 15.957422385723843 24.38828275701811 42.77907963144942 16.875215225808617 35 16.315782106091277 25.612305176898115 40.4412304057024 17.63068231130821 36 17.18099685595339 26.866676185596738 38.36492778211729 17.58739917633258 37 17.316277650392095 27.33679934375376 37.758739917633264 17.588183088220884 38 17.36510416229216 27.737714280914826 37.94603886523154 16.95114269156147 39 17.920449741449058 27.46032145986791 37.042244451723626 17.5769843469594 40 18.65043969057878 27.116128147196257 36.997953430034464 17.2354787321905 41 17.96350890159946 26.97328820240605 37.0352452384352 18.02795765755929 42 18.403395458350484 27.530481573871096 36.65650380897188 17.40961915880655 43 18.20249004011949 27.217252780787437 36.733103199200414 17.84715397989266 44 18.263747154819796 27.498397180156953 36.27373083265441 17.964124832368842 45 18.681964147229852 26.671930075059564 36.036261524204676 18.609844253505905 46 18.480162829697942 27.01998695346643 35.888886089203574 18.610964127632055 47 17.79933535470613 27.384561975233986 36.39277345226397 18.42332921779592 48 18.088990797434366 27.064389962568207 36.39792487324425 18.448694366753177 49 18.742269368922933 26.585979735877686 36.10278204729788 18.568968847901495 50 18.06082596316174 26.610728954065564 36.151384584372714 19.17706049839998 51 17.76389133861354 26.19295991130597 35.94907932348404 20.09406942659645 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 554.0 1 2013.0 2 3472.0 3 77872.0 4 152272.0 5 102177.0 6 52082.0 7 50955.5 8 49829.0 9 49505.0 10 49181.0 11 48616.0 12 48051.0 13 47109.0 14 46167.0 15 44108.5 16 42050.0 17 39982.0 18 37914.0 19 35853.0 20 33792.0 21 31980.5 22 30169.0 23 28994.5 24 27820.0 25 27928.0 26 28353.0 27 28670.0 28 30154.0 29 31638.0 30 34711.5 31 37785.0 32 41013.0 33 44241.0 34 48576.0 35 52911.0 36 57814.5 37 62718.0 38 66671.5 39 70625.0 40 73799.5 41 76974.0 42 79721.0 43 82468.0 44 85839.5 45 89211.0 46 93265.5 47 97320.0 48 100060.5 49 102801.0 50 99308.0 51 95815.0 52 88551.5 53 81288.0 54 73377.5 55 65467.0 56 58342.5 57 51218.0 58 44736.0 59 38254.0 60 32723.0 61 27192.0 62 22719.0 63 18246.0 64 14693.5 65 11141.0 66 8881.5 67 6622.0 68 5209.5 69 3797.0 70 3012.0 71 2227.0 72 2049.0 73 1871.0 74 1819.5 75 1499.5 76 1231.0 77 906.0 78 581.0 79 404.5 80 228.0 81 194.5 82 161.0 83 94.5 84 28.0 85 22.5 86 17.0 87 11.0 88 5.0 89 3.0 90 1.0 91 2.0 92 3.0 93 3.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1785915.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.43357199758462 #Duplication Level Percentage of deduplicated Percentage of total 1 75.55498228111416 35.08287709526345 2 9.197658349045486 8.541602623191777 3 4.335605403879075 6.039529370224081 4 2.686669322682402 4.990066137139008 5 1.85427377065611 4.305027731649661 6 1.341078458051597 3.7362637881809158 7 1.0327986344929556 3.356957082761501 8 0.8079173927826196 3.0011592340698097 9 0.6229303525577987 2.6032393237475993 >10 2.482771528329718 16.751568773757548 >50 0.04566518353942959 1.4782168274448342 >100 0.0343809339363783 3.300290078007629 >500 0.001815771629136412 0.5746195818685187 >1k 0.001331565861366702 0.9856724041520437 >5k 0.0 0.0 >10k+ 1.2105144194242745E-4 5.252909948541578 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 93454 5.2328358292527914 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCC 2745 0.15370272381384334 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 2142 0.11993851891047445 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 1838 0.1029164321930215 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.919559441518773E-4 0.0 0.0 0.03897161958995809 0.0 2 3.919559441518773E-4 0.0 0.0 0.12884151821335282 0.0 3 3.919559441518773E-4 0.0 0.0 0.2123841280240101 0.0 4 3.919559441518773E-4 0.0 0.0 0.32425955322621736 0.0 5 3.919559441518773E-4 0.0 0.0 0.5661523644742331 0.0 6 3.919559441518773E-4 0.0 0.0 1.009678512135236 0.0 7 3.919559441518773E-4 0.0 0.0 1.4083537010440026 0.0 8 3.919559441518773E-4 0.0 0.0 1.9667229403415056 0.0 9 3.919559441518773E-4 0.0 0.0 2.3559351928843197 0.0 10 3.919559441518773E-4 0.0 0.0 2.828242105587332 0.0 11 3.919559441518773E-4 0.0 0.0 3.44467681832562 0.0 12 3.919559441518773E-4 0.0 0.0 3.9256067617999735 0.0 13 3.919559441518773E-4 0.0 0.0 4.1607803282911 0.0 14 3.919559441518773E-4 0.0 0.0 4.293037462589205 0.0 15 3.919559441518773E-4 0.0 0.0 4.398081655621908 0.0 16 3.919559441518773E-4 0.0 0.0 4.552344316498825 0.0 17 3.919559441518773E-4 0.0 0.0 4.739251308152964 0.0 18 3.919559441518773E-4 0.0 0.0 4.941444581629025 0.0 19 3.919559441518773E-4 0.0 0.0 5.07090203061176 0.0 20 4.479496504592884E-4 0.0 0.0 5.195376039733134 0.0 21 4.479496504592884E-4 0.0 0.0 5.331776708297987 0.0 22 4.479496504592884E-4 0.0 0.0 5.472208923716974 0.0 23 4.479496504592884E-4 0.0 0.0 5.617400604172091 0.0 24 5.039433567666994E-4 0.0 0.0 5.7330836014032025 0.0 25 5.039433567666994E-4 0.0 0.0 5.848542623809084 0.0 26 5.039433567666994E-4 0.0 0.0 5.958346281877917 0.0 27 5.039433567666994E-4 0.0 0.0 6.072853411276572 0.0 28 5.599370630741104E-4 0.0 0.0 6.191728049767206 0.0 29 5.599370630741104E-4 0.0 0.0 6.328184712038367 0.0 30 5.599370630741104E-4 0.0 0.0 6.4813274987891365 0.0 31 6.159307693815215E-4 0.0 0.0 6.60820923728173 0.0 32 6.159307693815215E-4 0.0 0.0 6.743993975077201 0.0 33 6.159307693815215E-4 0.0 0.0 6.884706159027726 0.0 34 6.159307693815215E-4 0.0 0.0 7.026426229691783 0.0 35 6.159307693815215E-4 0.0 0.0 7.186232267493134 0.0 36 6.159307693815215E-4 0.0 0.0 7.3318159038924025 0.0 37 6.159307693815215E-4 0.0 0.0 7.488206325609002 0.0 38 6.159307693815215E-4 0.0 0.0 7.661282871805209 0.0 39 6.719244756889325E-4 0.0 0.0 7.86498797535157 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAATC 20 7.034338E-4 45.0 6 GCGACCG 20 7.034338E-4 45.0 31 CGTTTTT 59620 0.0 44.441463 1 GTTTTTT 67050 0.0 40.03691 2 TATTGCG 40 3.4596633E-7 39.375 1 GACCGAT 720 0.0 37.8125 9 GGACCGA 780 0.0 37.78846 8 CGTTTGG 745 0.0 37.449665 2 CGACCAA 570 0.0 37.105263 29 GGGACCG 890 0.0 36.91011 7 TGGGCGA 2905 0.0 36.712563 6 GCGAGAC 595 0.0 36.68067 21 TTGGGCG 2200 0.0 36.613632 5 GCGTTTG 340 0.0 36.397057 1 TCAAGCG 620 0.0 36.29032 17 CACGACC 590 0.0 36.228813 27 GGGCGAT 4370 0.0 36.092678 7 CTGCGCG 150 0.0 36.000004 1 CGAGACA 600 0.0 36.000004 22 TACGCGG 50 4.881622E-8 36.0 2 >>END_MODULE