##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933745.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1813582 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.55434052609697 34.0 31.0 34.0 31.0 34.0 2 32.779722670383805 34.0 31.0 34.0 31.0 34.0 3 32.78929764410984 34.0 31.0 34.0 31.0 34.0 4 36.23383888900529 37.0 37.0 37.0 35.0 37.0 5 36.28781273744446 37.0 37.0 37.0 35.0 37.0 6 36.28432957539279 37.0 37.0 37.0 35.0 37.0 7 36.29779739763628 37.0 37.0 37.0 35.0 37.0 8 36.26555181954828 37.0 37.0 37.0 35.0 37.0 9 38.11618002384232 39.0 39.0 39.0 37.0 39.0 10 37.628786567136196 39.0 38.0 39.0 35.0 39.0 11 37.50830841947042 39.0 37.0 39.0 35.0 39.0 12 37.551829473384714 39.0 37.0 39.0 35.0 39.0 13 37.600586573973494 39.0 37.0 39.0 35.0 39.0 14 39.04309703117918 40.0 39.0 41.0 35.0 41.0 15 39.071512619776776 41.0 39.0 41.0 35.0 41.0 16 39.12099921591635 41.0 39.0 41.0 35.0 41.0 17 39.07526431118086 41.0 39.0 41.0 35.0 41.0 18 38.51597611798088 39.0 38.0 41.0 35.0 41.0 19 37.933754856411234 38.0 37.0 41.0 35.0 41.0 20 37.235343645889735 38.0 35.0 41.0 34.0 41.0 21 37.170237684317556 38.0 35.0 41.0 34.0 41.0 22 37.1441010111481 38.0 35.0 41.0 34.0 41.0 23 36.996263196260216 38.0 35.0 40.0 34.0 41.0 24 36.89023435389191 38.0 35.0 40.0 33.0 41.0 25 36.841037240113764 37.0 35.0 40.0 33.0 41.0 26 36.825014253560084 38.0 35.0 40.0 33.0 41.0 27 36.758368797220086 37.0 35.0 40.0 33.0 41.0 28 36.65528109564387 37.0 35.0 40.0 33.0 41.0 29 36.43817594131393 37.0 35.0 40.0 33.0 41.0 30 36.07789225962763 37.0 35.0 40.0 32.0 41.0 31 35.55852781953063 37.0 35.0 40.0 30.0 41.0 32 34.7381552088629 37.0 35.0 40.0 21.0 41.0 33 33.495929050905886 37.0 33.0 40.0 15.0 41.0 34 32.44471934547211 37.0 31.0 40.0 10.0 41.0 35 31.78533035727086 37.0 30.0 40.0 7.0 41.0 36 31.389684613102688 37.0 26.0 40.0 7.0 41.0 37 31.18747043144451 37.0 24.0 40.0 7.0 41.0 38 31.00719515301762 37.0 23.0 40.0 7.0 41.0 39 30.893838271442924 37.0 23.0 40.0 7.0 41.0 40 30.746625187060744 37.0 23.0 40.0 7.0 41.0 41 30.584342478035182 37.0 22.0 40.0 7.0 41.0 42 30.36415888556459 36.0 21.0 40.0 7.0 41.0 43 30.241327935544135 36.0 21.0 40.0 7.0 41.0 44 30.067241514307046 36.0 20.0 40.0 7.0 41.0 45 30.007916929038775 36.0 20.0 40.0 7.0 41.0 46 29.851822525808043 35.0 20.0 40.0 7.0 41.0 47 29.80929729121705 35.0 20.0 40.0 7.0 41.0 48 29.673316122458207 35.0 20.0 40.0 7.0 41.0 49 29.611771069629054 35.0 20.0 40.0 7.0 41.0 50 29.454937797132967 35.0 20.0 40.0 7.0 41.0 51 28.809892797789125 35.0 18.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 13.0 11 7.0 12 10.0 13 13.0 14 31.0 15 50.0 16 124.0 17 327.0 18 767.0 19 1532.0 20 2784.0 21 4575.0 22 7390.0 23 13004.0 24 27018.0 25 58286.0 26 98904.0 27 107613.0 28 88721.0 29 67107.0 30 52963.0 31 48054.0 32 46638.0 33 51558.0 34 72030.0 35 93722.0 36 116489.0 37 144485.0 38 282001.0 39 427150.0 40 208.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 16.581549662491135 3.0482768355662992 38.03373655009809 42.33643695184447 2 46.42012326986042 2.9798487192748935 37.11886200899656 13.481166001868125 3 14.210330715677594 3.2092841680166657 68.87623498689334 13.704150129412401 4 11.963837312015668 3.4760490565080597 68.90545892052303 15.654654710953242 5 11.816559714421516 4.177202905630955 68.84601854231019 15.160218837637338 6 14.639867400536618 4.74944060979873 69.70476107504375 10.9059309146209 7 58.615822168504096 1.24868905844897 37.77474633074214 2.360742442304787 8 61.26301429987726 1.3290273061819096 35.80626627304417 1.6016921208966566 9 57.183132607182905 3.7430345029891123 36.76073097328933 2.3131019165386513 10 23.605218843151288 23.27835190247808 42.73432356518757 10.382105689183065 11 17.22778457218918 19.178785409206753 50.93533129464232 12.65809872396175 12 14.471030259453391 18.422657481161593 53.355017859683215 13.751294399701806 13 14.951956955902737 17.724095188417177 54.92241321318805 12.40153464249204 14 14.956478394690729 18.578591979849822 53.88788596269703 12.57704366276242 15 14.23514348951412 18.702655849032467 54.16920767850585 12.89299298294756 16 15.881167766332045 18.699788595166915 52.99490180206905 12.424141836431989 17 16.096046387756385 18.03844546317729 52.864772588170815 13.00073556089551 18 16.521227052319666 17.144909907575173 53.016792182542616 13.317070857562546 19 16.038921868434954 19.01612389183395 51.66730812281992 13.277646116911173 20 17.297039780941805 19.394325704600067 50.95518151371154 12.353453000746589 21 17.33723647455698 19.5757346510938 51.171879738550565 11.915149135798657 22 17.09412643045641 17.925244074985304 51.37793604038858 13.602693454169703 23 14.94831774907338 20.087429187100444 51.235620997561725 13.728632066264442 24 14.232110817156324 20.2556046542147 51.92083953193184 13.591444996697144 25 14.66787826522319 21.304799011017973 50.706392101377276 13.320930622381564 26 14.985206072843688 21.277504959797792 50.357689919727925 13.3795990476306 27 14.604467843196502 20.236636667104108 51.151864100989094 14.007031388710297 28 14.097680722459751 20.462157211529448 51.21907914833738 14.221082917673423 29 15.008860917234513 19.5932138717742 50.74918035137094 14.648744859620352 30 15.749660064998439 19.57093751481874 50.257942568905065 14.42145985127775 31 15.82597312942012 20.465520720871734 48.98460615511181 14.723899994596328 32 15.639436209666835 21.032740730774787 47.75731122165968 15.570511837898701 33 16.235053060738363 22.599033294331328 44.842030853857175 16.323882791073135 34 15.9976775243689 24.508514089795774 42.65023583163044 16.843572554204883 35 16.42214137546579 25.612847944013563 40.359685969534326 17.605324710986324 36 17.308674214896268 26.933383767593632 38.233010693754125 17.524931323755972 37 17.40864212370877 27.306733304587276 37.748058813993524 17.53656575771043 38 17.47194226674063 27.79923929549367 37.82718399278334 16.90163444498236 39 17.92210112363268 27.55293116054306 37.062895419120835 17.46207229670343 40 18.701056803607447 27.124552405129737 36.98255717138789 17.19183361987492 41 18.053498545971454 27.03726658072257 36.952175308312505 17.95705956499348 42 18.490368783986607 27.568701056803608 36.560795155664316 17.38013500354547 43 18.256963291430992 27.209026115168765 36.764811296097996 17.769199297302247 44 18.326935313650004 27.508213028139888 36.305664701127384 17.859186957082724 45 18.72019020921028 26.714479962858036 36.020979475976276 18.544350351955412 46 18.51093581652222 27.10304800113808 35.89278014448754 18.493236037852164 47 17.802889530222508 27.538815449204947 36.386499204337056 18.271795816235496 48 18.20689662777862 27.075698810420484 36.35468371432888 18.36272084747202 49 18.746877725958903 26.66049839488923 36.14052190637093 18.452101972780937 50 18.14139090485018 26.705437085282057 36.10594944149203 19.047222568375734 51 17.807631527000158 26.360870365938787 35.88296531394776 19.948532793113298 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 527.0 1 2102.0 2 3677.0 3 78340.5 4 153004.0 5 103294.0 6 53584.0 7 52013.5 8 50443.0 9 50505.0 10 50567.0 11 49692.5 12 48818.0 13 47488.0 14 46158.0 15 43973.5 16 41789.0 17 39867.0 18 37945.0 19 35922.0 20 33899.0 21 32045.0 22 30191.0 23 29077.0 24 27963.0 25 28000.5 26 28408.5 27 28779.0 28 30347.5 29 31916.0 30 34880.0 31 37844.0 32 41416.0 33 44988.0 34 49333.5 35 53679.0 36 58685.0 37 63691.0 38 67922.0 39 72153.0 40 75615.0 41 79077.0 42 81752.0 43 84427.0 44 87948.5 45 91470.0 46 95398.0 47 99326.0 48 101920.5 49 104515.0 50 101039.5 51 97564.0 52 90334.5 53 83105.0 54 74690.5 55 66276.0 56 59111.5 57 51947.0 58 45653.5 59 39360.0 60 33618.0 61 27876.0 62 23283.5 63 18691.0 64 15089.5 65 11488.0 66 9084.5 67 6681.0 68 5302.5 69 3924.0 70 3116.5 71 2309.0 72 2060.0 73 1811.0 74 1818.5 75 1528.5 76 1231.0 77 900.5 78 570.0 79 420.5 80 271.0 81 202.5 82 134.0 83 82.0 84 30.0 85 21.0 86 12.0 87 8.0 88 4.0 89 2.5 90 1.0 91 2.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1813582.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.021102464286194 #Duplication Level Percentage of deduplicated Percentage of total 1 75.2218371972047 34.61791877204412 2 9.207065363521465 8.474385969800036 3 4.444992535776198 6.136903708258311 4 2.7574376595884065 5.076012842831982 5 1.8590861308364501 4.277859665857882 6 1.362515857185403 3.7622689123646498 7 1.0668759061561572 3.4369163775723486 8 0.8211611539657802 3.0232593285080527 9 0.6386298519824123 2.645140486935107 >10 2.536037822668062 17.021584739101673 >50 0.045716356743906304 1.4552115482593344 >100 0.03537356497354654 3.3263283381594384 >500 0.0018169996652727587 0.5824434563821722 >1k 0.001332466421200023 0.9943571909924201 >5k 0.0 0.0 >10k+ 1.2113331101818391E-4 5.169408662932506 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 92730 5.113085595247417 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCGCAACTATCGTATGCC 2728 0.15042054894678047 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 2204 0.12152745230157776 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 1936 0.10675006699448934 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.3083698448705377E-4 0.0 0.0 0.042953668485902485 0.0 2 3.3083698448705377E-4 0.0 0.0 0.13073574836980076 0.0 3 3.3083698448705377E-4 0.0 0.0 0.21691878282867827 0.0 4 3.3083698448705377E-4 0.0 0.0 0.33100240297929734 0.0 5 3.3083698448705377E-4 0.0 0.0 0.5665583359340797 0.0 6 3.3083698448705377E-4 0.0 0.0 0.9949370913473998 0.0 7 3.3083698448705377E-4 0.0 0.0 1.393650797151714 0.0 8 3.3083698448705377E-4 0.0 0.0 1.924589017756021 0.0 9 3.3083698448705377E-4 0.0 0.0 2.308029082776516 0.0 10 3.3083698448705377E-4 0.0 0.0 2.769491536638542 0.0 11 3.3083698448705377E-4 0.0 0.0 3.378782983068866 0.0 12 3.3083698448705377E-4 0.0 0.0 3.855574217212125 0.0 13 3.3083698448705377E-4 0.0 0.0 4.091019871172079 0.0 14 3.3083698448705377E-4 0.0 0.0 4.2175098782409615 0.0 15 3.8597648190156277E-4 0.0 0.0 4.320675877903508 0.0 16 3.8597648190156277E-4 0.0 0.0 4.467457220020931 0.0 17 3.8597648190156277E-4 0.0 0.0 4.652174536359536 0.0 18 3.8597648190156277E-4 0.0 0.0 4.856245816290634 0.0 19 3.8597648190156277E-4 0.0 0.0 4.982349846877615 0.0 20 3.8597648190156277E-4 0.0 0.0 5.108784714449085 0.0 21 3.8597648190156277E-4 0.0 0.0 5.2406783922645905 0.0 22 4.411159793160717E-4 0.0 0.0 5.377479485349987 0.0 23 4.962554767305807E-4 0.0 0.0 5.517864645767327 0.0 24 4.962554767305807E-4 0.0 0.0 5.637903331638713 0.0 25 6.065344715595986E-4 0.0 0.0 5.749671092897922 0.0 26 6.065344715595986E-4 0.0 0.0 5.856586578384655 0.0 27 6.065344715595986E-4 0.0 0.0 5.973151475918927 0.0 28 6.616739689741075E-4 0.0 0.0 6.090543465914417 0.0 29 6.616739689741075E-4 0.0 0.0 6.221499772273876 0.0 30 6.616739689741075E-4 0.0 0.0 6.364476489069697 0.0 31 7.168134663886166E-4 0.0 0.0 6.495322516434327 0.0 32 7.168134663886166E-4 0.0 0.0 6.633005841478356 0.0 33 7.168134663886166E-4 0.0 0.0 6.767766773159416 0.0 34 7.168134663886166E-4 0.0 0.0 6.902196867855989 0.0 35 7.719529638031255E-4 0.0 0.0 7.0575248320726605 0.0 36 8.270924612176345E-4 0.0 0.0 7.204471592682327 0.0 37 8.270924612176345E-4 0.0 0.0 7.354395886152377 0.0 38 8.270924612176345E-4 0.0 0.0 7.524501235676137 0.0 39 8.270924612176345E-4 0.0 0.0 7.72631179621324 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTGCG 20 7.034367E-4 45.0 1 CTACGCG 20 7.034367E-4 45.0 1 CGTTTTT 60040 0.0 44.45661 1 GTTTTTT 67860 0.0 39.87732 2 ACACGAC 505 0.0 37.87129 26 GCGAGAC 525 0.0 37.714287 21 TCAAGCG 525 0.0 37.714287 17 GTTAGCG 30 1.14018214E-4 37.499996 1 TACGGGA 240 0.0 37.499996 4 CGACCAA 515 0.0 37.135925 29 GACCGAT 795 0.0 36.792454 9 TGGGCGA 2955 0.0 36.47208 6 GACACGA 525 0.0 36.428574 25 TCTTGCG 415 0.0 36.325302 1 TCTACCG 50 4.881622E-8 36.000004 1 AATTGCG 25 0.0021074286 36.000004 41 ACGTGAG 515 0.0 35.825245 44 AACACGT 520 0.0 35.48077 41 GGCACCG 730 0.0 35.4452 8 TTGGGCG 2165 0.0 35.4388 5 >>END_MODULE