##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933742.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1980623 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.598464220601294 34.0 31.0 34.0 31.0 34.0 2 32.793766405822815 34.0 31.0 34.0 31.0 34.0 3 32.8257820897768 34.0 31.0 34.0 31.0 34.0 4 36.27959889388339 37.0 37.0 37.0 35.0 37.0 5 36.28483663978455 37.0 37.0 37.0 35.0 37.0 6 36.25914472365513 37.0 37.0 37.0 35.0 37.0 7 36.33369752850492 37.0 37.0 37.0 35.0 37.0 8 36.255374697759244 37.0 37.0 37.0 35.0 37.0 9 38.103173597398396 39.0 39.0 39.0 37.0 39.0 10 37.59971332252529 39.0 38.0 39.0 35.0 39.0 11 37.48951617748557 39.0 37.0 39.0 35.0 39.0 12 37.509314998361624 39.0 37.0 39.0 35.0 39.0 13 37.532660683027515 39.0 37.0 39.0 35.0 39.0 14 38.88411626038878 40.0 38.0 41.0 35.0 41.0 15 38.93097373907099 40.0 38.0 41.0 35.0 41.0 16 38.951009354127464 40.0 38.0 41.0 35.0 41.0 17 38.8901497155188 40.0 38.0 41.0 35.0 41.0 18 38.40689015526932 39.0 38.0 41.0 35.0 41.0 19 37.92470550932712 39.0 37.0 41.0 35.0 41.0 20 37.379494734737506 38.0 35.0 41.0 34.0 41.0 21 37.27975742985919 38.0 35.0 41.0 34.0 41.0 22 37.27272327949337 38.0 35.0 41.0 34.0 41.0 23 37.182050294276095 38.0 35.0 41.0 34.0 41.0 24 37.09908750933418 38.0 35.0 41.0 33.0 41.0 25 37.03254783974538 38.0 35.0 40.0 33.0 41.0 26 36.98568076812195 38.0 35.0 40.0 33.0 41.0 27 36.90883121118961 38.0 35.0 40.0 33.0 41.0 28 36.75892029931996 38.0 35.0 40.0 33.0 41.0 29 36.609211848999024 38.0 35.0 40.0 33.0 41.0 30 36.382646773262756 38.0 35.0 40.0 33.0 41.0 31 35.95288502658002 38.0 35.0 40.0 31.0 41.0 32 35.224706064707924 38.0 35.0 40.0 25.0 41.0 33 34.33718077594777 38.0 34.0 40.0 18.0 41.0 34 33.513119861780865 38.0 33.0 40.0 14.0 41.0 35 32.963177747607695 38.0 33.0 40.0 10.0 41.0 36 32.64975717236445 38.0 32.0 40.0 9.0 41.0 37 32.455457197053654 38.0 31.0 40.0 8.0 41.0 38 32.29442806632055 37.0 31.0 40.0 8.0 41.0 39 32.182586489200624 37.0 31.0 40.0 8.0 41.0 40 32.02757667663155 37.0 30.0 40.0 8.0 41.0 41 31.85964517225136 37.0 30.0 40.0 7.0 41.0 42 31.700374579109706 37.0 29.0 40.0 7.0 41.0 43 31.55608008187323 37.0 29.0 40.0 7.0 41.0 44 31.33600942733675 37.0 27.0 40.0 7.0 41.0 45 31.33609929804915 36.0 27.0 40.0 7.0 41.0 46 31.239607436649983 36.0 26.0 40.0 7.0 41.0 47 31.162321148446726 36.0 26.0 40.0 7.0 41.0 48 31.081843440170086 36.0 26.0 40.0 7.0 41.0 49 31.051551961175853 36.0 26.0 40.0 7.0 41.0 50 30.94988546533086 36.0 26.0 40.0 7.0 41.0 51 30.146321637181835 35.0 24.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 2.0 9 4.0 10 7.0 11 8.0 12 14.0 13 27.0 14 30.0 15 54.0 16 131.0 17 287.0 18 676.0 19 1394.0 20 2492.0 21 3977.0 22 6685.0 23 11672.0 24 23299.0 25 49386.0 26 83110.0 27 93911.0 28 81058.0 29 63902.0 30 53383.0 31 50318.0 32 51595.0 33 61279.0 34 90271.0 35 115947.0 36 149011.0 37 185476.0 38 341842.0 39 459223.0 40 150.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.011088935148184 3.173748865887148 39.66862951707619 38.14653268188848 2 42.546966282831214 3.323701683763139 40.09172871364212 14.037603319763528 3 16.14269853475396 3.5792273441235407 65.94046418727845 14.337609933844048 4 13.408255887162776 3.7143363477047373 65.94071663309978 16.9366911320327 5 13.325302190270435 4.529584883140305 65.03150776296145 17.113605163627806 6 16.154109085878535 5.2844988672756 66.134039643082 12.427352403763866 7 63.69879578294304 1.4275306305137323 32.20269581843693 2.670977768106298 8 65.7811203848486 1.6915384704711596 30.468292047502228 2.059049097178009 9 61.13182569322885 4.150966640294493 31.714061686651117 3.0031459798255398 10 25.432805738396453 25.912503288106826 37.529100692054975 11.125590281441749 11 19.653260615473013 19.548798534602497 46.742060452695945 14.055880397228549 12 16.496526597944182 19.438479710676894 48.77737964266799 15.287614048710935 13 17.079171553597025 18.366089861624346 50.533847178387816 14.020891406390817 14 16.31633077067165 19.422474645603934 49.75166904554779 14.509525538176623 15 15.451905789239042 19.217438149511544 50.26645656442442 15.06419949682499 16 17.32596258853906 19.50552932082481 48.88184172353851 14.286666367097625 17 17.329345362545016 19.247984093893688 48.644492162314585 14.77817838124671 18 18.059721612846058 18.002012498087723 48.77445127114044 15.163814617925775 19 17.584972001233957 19.791853371388697 47.35954293169372 15.26363169568363 20 19.02588226027871 20.608515603423772 46.42382725031467 13.941774885982843 21 18.947523077334758 20.97834873168695 46.52187720732315 13.552250983655142 22 18.60561045691179 18.849624587819086 46.9893058901164 15.555459065152732 23 16.114323624435343 21.34596033672233 46.83925209391187 15.70046394493046 24 15.507898272412266 21.038329858837347 47.84908586843635 15.604686000314041 25 16.306687340296463 22.242092513315253 46.08625669801876 15.36496344836953 26 16.45754896312928 21.94400448747692 45.995426691500604 15.6030198578932 27 16.121896999075545 21.114719964374846 46.693237430848775 16.070145605700834 28 15.403385702377484 21.61304801570011 46.838949158926255 16.14461712299615 29 16.486024851776435 20.931949189724648 46.14744956511158 16.434576393387335 30 17.563615084748587 20.7535204832015 46.173855398023754 15.509009034026164 31 18.051239433249034 21.712208734322484 44.394213335904915 15.84233849652357 32 17.74017569219382 22.249110507148508 43.83570220077218 16.17501159988549 33 18.682555943256236 23.03305576073791 41.19840070523264 17.085987590773204 34 18.17614962564809 24.753877946484515 40.38022379826953 16.689748629597858 35 19.102423833309015 25.831619646949473 38.29401153071533 16.77194498902618 36 19.795236145394657 26.888256876750393 36.708500305207 16.60800667264795 37 20.49415764635673 26.279610001499528 36.2990836721577 16.927148679986047 38 20.0398056571089 26.819490635017367 36.646095698171735 16.494608009702 39 20.424331132174068 26.376599686058377 35.406384758735 17.79268442303255 40 21.136329326681555 26.344942980062335 35.592689774883965 16.92603791837215 41 19.744847959455182 26.491614002260906 35.614703050504815 18.148834987779097 42 20.503801076731918 26.518979129294166 35.50751455476383 17.469705239210086 43 19.951096195490006 26.12385092973272 35.78404370745972 18.141009167317556 44 19.95528679612425 26.713564368383082 35.14697143272596 18.184177402766704 45 20.10029167590198 25.95516663191329 34.86428260198937 19.08025909019536 46 19.75252231242392 26.440115054707537 34.9668260946177 18.840536538250845 47 18.98458212390748 26.972321335256634 35.87517664896348 18.167919891872405 48 19.36562384663815 26.425978088712494 35.81681117506966 18.391586889579692 49 20.113014945297515 25.742354804523625 35.53780805332464 18.60682219685422 50 19.069504898206272 26.153589047486577 35.65878009091079 19.118125963396366 51 18.857500897444897 25.198334059535814 35.41925949562334 20.524905547395946 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 941.0 1 2515.0 2 4089.0 3 80035.5 4 155982.0 5 102191.5 6 48401.0 7 47219.5 8 46038.0 9 46112.0 10 46186.0 11 45399.5 12 44613.0 13 42897.5 14 41182.0 15 39223.0 16 37264.0 17 34879.5 18 32495.0 19 30454.0 20 28413.0 21 26938.0 22 25463.0 23 24931.0 24 24399.0 25 24719.0 26 26280.0 27 27521.0 28 29015.0 29 30509.0 30 34181.0 31 37853.0 32 41828.5 33 45804.0 34 50911.5 35 56019.0 36 60254.0 37 64489.0 38 68536.0 39 72583.0 40 76766.5 41 80950.0 42 86188.5 43 91427.0 44 97482.5 45 103538.0 46 111096.0 47 118654.0 48 122511.5 49 126369.0 50 124209.5 51 122050.0 52 113097.0 53 104144.0 54 94299.5 55 84455.0 56 75908.0 57 67361.0 58 59668.0 59 51975.0 60 46304.0 61 40633.0 62 35938.5 63 31244.0 64 26500.5 65 21757.0 66 17802.0 67 13847.0 68 11280.5 69 8714.0 70 7173.0 71 5632.0 72 4954.5 73 4277.0 74 3979.5 75 3104.5 76 2527.0 77 1931.5 78 1336.0 79 897.0 80 458.0 81 337.5 82 217.0 83 129.0 84 41.0 85 33.0 86 25.0 87 17.0 88 9.0 89 11.5 90 14.0 91 8.0 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1980623.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.69884362652323 #Duplication Level Percentage of deduplicated Percentage of total 1 74.51173261357106 28.090061561403264 2 7.939166012456829 5.9859475605723595 3 3.830014542753753 4.331613580037508 4 2.4629838374667052 3.714065701732457 5 1.7308610833892175 3.2625730660962344 6 1.3923127145784546 3.1493147583667938 7 1.1283629716383563 2.9776585455227425 8 0.9557447342274727 2.88243770260116 9 0.8305927837007444 2.818114872304769 >10 5.097336083489846 30.991891176413176 >50 0.06916379810919432 1.836652748386109 >100 0.04675800463428363 3.2471084323063106 >500 0.002955622693213803 0.7300775384930607 >1k 0.0018808508047724198 1.0773645091102593 >5k 0.0 0.0 >10k+ 1.3434648605517284E-4 4.905118246653793 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 96849 4.88982507019256 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCC 3434 0.17337979009634846 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 2080 0.10501746167746208 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5146749280403187E-4 0.0 0.0 0.0627580311851372 0.0 2 1.5146749280403187E-4 0.0 0.0 0.17757039073059336 0.0 3 1.5146749280403187E-4 0.0 0.0 0.2989968307951589 0.0 4 1.5146749280403187E-4 0.0 0.0 0.4464756796220179 0.0 5 1.5146749280403187E-4 0.0 0.0 0.7838442752608649 0.0 6 1.5146749280403187E-4 0.0 0.0 1.3777483145454739 0.0 7 1.5146749280403187E-4 0.0 0.0 1.9070262235670292 0.0 8 1.5146749280403187E-4 0.0 0.0 2.680722176810024 0.0 9 1.5146749280403187E-4 0.0 0.0 3.232518253095112 0.0 10 1.5146749280403187E-4 0.0 0.0 3.9200796920968806 0.0 11 1.5146749280403187E-4 0.0 0.0 4.758502753931465 0.0 12 1.5146749280403187E-4 0.0 0.0 5.430362062845882 0.0 13 1.5146749280403187E-4 0.0 0.0 5.750261407647997 0.0 14 1.5146749280403187E-4 0.0 0.0 5.927579352557251 0.0 15 1.5146749280403187E-4 0.0 0.0 6.074502820577162 0.0 16 2.019566570720425E-4 0.0 0.0 6.297059056670553 0.0 17 2.019566570720425E-4 0.0 0.0 6.566166302219049 0.0 18 2.524458213400531E-4 0.0 0.0 6.852540841947206 0.0 19 2.524458213400531E-4 0.0 0.0 7.04631825440783 0.0 20 2.524458213400531E-4 0.0 0.0 7.237722676147858 0.0 21 2.524458213400531E-4 0.0 0.0 7.444829227975238 0.0 22 2.524458213400531E-4 0.0 0.0 7.6659212783048565 0.0 23 2.524458213400531E-4 0.0 0.0 7.867978913705435 0.0 24 3.0293498560806373E-4 0.0 0.0 8.03232114339781 0.0 25 3.5342414987607436E-4 0.0 0.0 8.182425428766605 0.0 26 3.5342414987607436E-4 0.0 0.0 8.328389602665425 0.0 27 3.5342414987607436E-4 0.0 0.0 8.484451609417844 0.0 28 4.03913314144085E-4 0.0 0.0 8.643542966026347 0.0 29 4.03913314144085E-4 0.0 0.0 8.8195986818289 0.0 30 4.03913314144085E-4 0.0 0.0 9.03609621821013 0.0 31 5.048916426801062E-4 1.0097832853602124E-4 0.0 9.19796447885337 0.0 32 5.048916426801062E-4 1.0097832853602124E-4 0.0 9.405222498173554 0.0 33 5.048916426801062E-4 1.0097832853602124E-4 0.0 9.582035551440129 0.0 34 5.048916426801062E-4 1.0097832853602124E-4 0.0 9.753850177444168 0.0 35 5.048916426801062E-4 1.0097832853602124E-4 0.0 9.955150475380727 0.0 36 5.553808069481168E-4 1.0097832853602124E-4 0.0 10.124541621499901 0.0 37 5.553808069481168E-4 1.0097832853602124E-4 0.0 10.29766896577491 0.0 38 6.058699712161275E-4 1.0097832853602124E-4 0.0 10.503866712645465 0.0 39 6.058699712161275E-4 1.0097832853602124E-4 0.0 10.79104907900191 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 20 7.034525E-4 45.0 22 CGTTTTT 53635 0.0 44.345577 1 TACGAAT 120 0.0 41.250004 12 GTTTTTT 60565 0.0 39.884422 2 CGTTTGG 1010 0.0 37.87129 2 CGAATAT 125 0.0 37.800003 14 GCTACGA 135 0.0 36.666668 10 TGGGCGA 3285 0.0 36.57534 6 TTGGGAC 4260 0.0 36.23239 5 TACGGGA 400 0.0 36.0 4 CGACCAA 905 0.0 35.552486 29 TCAAGCG 965 0.0 35.440414 17 TCGTTTG 540 0.0 35.416668 1 GGGCGAT 5315 0.0 35.390404 7 ACTTGCG 115 0.0 35.217392 1 CACGACC 915 0.0 35.163937 27 GACACGA 910 0.0 35.10989 25 CGAGACA 950 0.0 35.05263 22 TTGGGAT 6795 0.0 34.60265 5 ACACGAC 925 0.0 34.54054 26 >>END_MODULE