##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933741.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2005779 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.47525076292054 34.0 31.0 34.0 31.0 34.0 2 32.70979006161696 34.0 31.0 34.0 31.0 34.0 3 32.76173895528869 34.0 31.0 34.0 31.0 34.0 4 36.198961101896074 37.0 37.0 37.0 35.0 37.0 5 36.25334695397648 37.0 37.0 37.0 35.0 37.0 6 36.246257937689045 37.0 37.0 37.0 35.0 37.0 7 36.26292328317327 37.0 37.0 37.0 35.0 37.0 8 36.2173115781948 37.0 37.0 37.0 35.0 37.0 9 38.075229125442036 39.0 39.0 39.0 37.0 39.0 10 37.609121942148164 39.0 38.0 39.0 35.0 39.0 11 37.496562183570575 39.0 37.0 39.0 35.0 39.0 12 37.49342973478135 39.0 37.0 39.0 35.0 39.0 13 37.52557086299139 39.0 37.0 39.0 35.0 39.0 14 38.89127715466161 40.0 38.0 41.0 35.0 41.0 15 38.93413382032617 40.0 38.0 41.0 35.0 41.0 16 39.005259801802694 40.0 38.0 41.0 35.0 41.0 17 38.964738886986055 40.0 38.0 41.0 35.0 41.0 18 38.51851874010048 39.0 38.0 41.0 35.0 41.0 19 38.0609100005534 39.0 37.0 41.0 35.0 41.0 20 37.47303765768811 39.0 35.0 41.0 34.0 41.0 21 37.404561519489434 39.0 35.0 41.0 34.0 41.0 22 37.376171053740215 39.0 35.0 41.0 34.0 41.0 23 37.23932646617598 38.0 35.0 41.0 34.0 41.0 24 37.15474785606989 38.0 35.0 41.0 34.0 41.0 25 37.10183823841012 38.0 35.0 41.0 33.0 41.0 26 37.08275687401254 38.0 35.0 41.0 34.0 41.0 27 37.00883098287498 38.0 35.0 41.0 33.0 41.0 28 36.91524589698067 38.0 35.0 41.0 33.0 41.0 29 36.73247800480512 38.0 35.0 41.0 33.0 41.0 30 36.42665966689251 38.0 35.0 40.0 33.0 41.0 31 35.99245430329064 38.0 35.0 41.0 31.0 41.0 32 35.33564914180476 38.0 35.0 41.0 25.0 41.0 33 34.39882210353184 38.0 35.0 41.0 18.0 41.0 34 33.60196960881533 38.0 33.0 41.0 15.0 41.0 35 33.09665571331637 38.0 33.0 41.0 10.0 41.0 36 32.769062793059454 38.0 33.0 41.0 9.0 41.0 37 32.597823090180924 38.0 32.0 41.0 8.0 41.0 38 32.41666055931386 38.0 31.0 40.0 8.0 41.0 39 32.338766135252186 38.0 31.0 40.0 8.0 41.0 40 32.178050024454336 38.0 31.0 40.0 8.0 41.0 41 32.01706120165781 37.0 30.0 40.0 7.0 41.0 42 31.8099486533661 37.0 30.0 40.0 7.0 41.0 43 31.699009212879385 37.0 29.0 40.0 7.0 41.0 44 31.506746755250703 37.0 28.0 40.0 7.0 41.0 45 31.474107566187502 37.0 27.0 40.0 7.0 41.0 46 31.354395474277077 36.0 27.0 40.0 7.0 41.0 47 31.32946949788586 36.0 27.0 40.0 7.0 41.0 48 31.210452397796566 36.0 26.0 40.0 7.0 41.0 49 31.178732552290157 36.0 27.0 40.0 7.0 41.0 50 31.030025242063058 36.0 26.0 40.0 7.0 41.0 51 30.32447891816596 35.0 24.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 5.0 9 7.0 10 4.0 11 10.0 12 17.0 13 26.0 14 36.0 15 66.0 16 126.0 17 292.0 18 642.0 19 1406.0 20 2434.0 21 4119.0 22 6604.0 23 11484.0 24 23356.0 25 49160.0 26 83217.0 27 93394.0 28 80688.0 29 64589.0 30 54383.0 31 50695.0 32 51499.0 33 60441.0 34 89473.0 35 115821.0 36 147239.0 37 181319.0 38 339711.0 39 493237.0 40 277.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.15649730104862 3.376742901386444 39.54942194528909 37.91733785227585 2 42.49331556467587 3.3682673913726284 40.04957674798669 14.088840295964811 3 16.29491584067836 3.670095259746961 65.67558041040414 14.35940848917054 4 13.596163884455864 3.7598359540108857 65.60996999170897 17.034030169824295 5 13.405415053203768 4.555237640836802 64.92569719794653 17.113650108012894 6 16.268641759635532 5.294651105630281 66.02182992243911 12.414877212295075 7 63.755179409097416 1.4570897391985855 32.066593577856786 2.7211372738472184 8 65.88422752456776 1.7102083529641103 30.334498466680525 2.071065655787602 9 61.25001807277871 4.208788705036796 31.53303529451649 3.0081579276680035 10 25.522153736777582 25.901457737866433 37.39868649537163 11.17770202998436 11 19.74973314607442 19.62270020774971 46.54156813886276 14.08599850731312 12 16.55730765951782 19.535950869961248 48.65281768330409 15.253923787216836 13 17.159068870498693 18.398387858283492 50.40749753587011 14.035045735347712 14 16.387747603300266 19.443468098928147 49.63278606466615 14.53599823310544 15 15.490191092837247 19.254813217208874 50.14640197150334 15.108593718450535 16 17.405407076253166 19.500752575433285 48.779252350333714 14.314587997979839 17 17.51120138360208 19.251024165673286 48.51446744631387 14.723307004410755 18 18.175631512743927 18.02297262061274 48.6196634823677 15.181732384275637 19 17.673083624865953 19.856075868777168 47.24463662247935 15.226203883877536 20 19.21283451466986 20.610146980300424 46.25529532416084 13.92172318086888 21 19.069398971671355 20.968511486061026 46.397334900804125 13.564754641463491 22 18.694731573119473 18.88039509836328 46.92311565730821 15.50175767120904 23 16.233393609166313 21.354795318925962 46.75225934661795 15.659551725289775 24 15.605458029025133 21.07390694587988 47.73138017697862 15.589254848116369 25 16.400211588614695 22.172831603082894 46.05183322788802 15.375123580414392 26 16.511190913854417 22.013641582646944 45.87688873001462 15.598278773484017 27 16.17670740395627 21.159858588608216 46.622135339935255 16.041298667500257 28 15.448860517534586 21.600186261796537 46.80879598400422 16.14215723666466 29 16.68723224243548 20.901405389128115 45.999085642037336 16.41227672639907 30 17.63030722726681 20.765049389788206 46.034283936565295 15.570359446379687 31 18.13699315826918 21.674870461800626 44.36336206531228 15.824774314617912 32 17.885120943035098 22.221889849280505 43.75482044632036 16.13816876136404 33 18.753262448156054 23.135250693122224 41.051581455384664 17.05990540333706 34 18.25216038257455 24.772569659967523 40.28823713878747 16.687032818670453 35 19.07917073615787 25.924042479256187 38.242249021452515 16.754537763133428 36 19.883047932997602 26.898227571432347 36.668695803475856 16.550028692094195 37 20.510784089373754 26.246460851369967 36.36567139251134 16.87708366674494 38 20.0135209312691 26.88207424646484 36.65518484339501 16.449219978871053 39 20.474937667609442 26.40973905898905 35.42100101755976 17.694322255841747 40 21.157664927192876 26.422701603716064 35.542549802346116 16.87708366674494 41 19.724007480385428 26.58268931921214 35.61872968058794 18.074573519814496 42 20.56941467629285 26.555168839637865 35.4157661437277 17.459650340341586 43 20.014867041683058 26.224723660981592 35.74626117832523 18.01414811901012 44 20.00858519308458 26.67377612389002 35.20033862155302 18.117300061472374 45 20.129386138752075 26.00510823974127 34.81719571298733 19.048309908519336 46 19.75561614714283 26.49384603189085 34.9404894557177 18.810048365248612 47 18.95188851812687 27.03533140989112 35.891690958974046 18.12108911300796 48 19.43544129238565 26.517527603988277 35.78026293026301 18.26676817336307 49 20.167575789755503 25.712055017028295 35.6197267994131 18.50064239380311 50 19.070396090496512 26.18743141692081 35.62506138512767 19.11711110745501 51 18.830938004635605 25.318193081092183 35.41716211008292 20.433706804189296 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 990.0 1 2701.5 2 4413.0 3 80324.5 4 156236.0 5 103352.5 6 50469.0 7 48562.5 8 46656.0 9 46335.0 10 46014.0 11 45270.0 12 44526.0 13 43177.5 14 41829.0 15 39549.5 16 37270.0 17 34952.0 18 32634.0 19 30529.5 20 28425.0 21 26973.0 22 25521.0 23 25071.5 24 24622.0 25 25004.5 26 26497.5 27 27608.0 28 29446.5 29 31285.0 30 34828.5 31 38372.0 32 42380.5 33 46389.0 34 51466.0 35 56543.0 36 61061.0 37 65579.0 38 69745.0 39 73911.0 40 78124.5 41 82338.0 42 87596.5 43 92855.0 44 98892.0 45 104929.0 46 112469.5 47 120010.0 48 123816.0 49 127622.0 50 125358.0 51 123094.0 52 114499.5 53 105905.0 54 95775.0 55 85645.0 56 77192.0 57 68739.0 58 60972.5 59 53206.0 60 47333.5 61 41461.0 62 36670.0 63 31879.0 64 26906.0 65 21933.0 66 17952.5 67 13972.0 68 11437.5 69 8903.0 70 7305.0 71 5707.0 72 5088.5 73 4470.0 74 4143.0 75 3176.5 76 2537.0 77 1926.5 78 1316.0 79 883.0 80 450.0 81 333.0 82 216.0 83 135.0 84 54.0 85 38.0 86 22.0 87 18.5 88 15.0 89 8.5 90 2.0 91 2.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2005779.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.65955963865938 #Duplication Level Percentage of deduplicated Percentage of total 1 74.60826636259684 28.097144566192 2 7.9522798948455815 5.989587179264983 3 3.7626637909052802 4.251007843014648 4 2.3768665628096297 3.580469923010584 5 1.7649302773337674 3.3233248518663325 6 1.3523217312253282 3.0556704532641206 7 1.1152282312241353 2.9399302859151355 8 0.9744606248900115 2.9358206414856545 9 0.8220950993406686 2.786376548004257 >10 5.1504648007264136 31.364635948031715 >50 0.06830360853845718 1.790227897969366 >100 0.04730856933727694 3.2966380334144874 >500 0.0030733406448729917 0.793829929323663 >1k 0.0016034820755859084 0.9722718265903324 >5k 0.0 0.0 >10k+ 1.3362350629882573E-4 4.823064072652752 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 95844 4.778392833906428 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCC 3326 0.16582086062322918 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 2148 0.10709056182161644 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGC 2034 0.10140698451823456 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.994237650309431E-4 0.0 0.0 0.05957784980299425 0.0 2 1.994237650309431E-4 0.0 0.0 0.17165400575038425 0.0 3 2.4927970628867884E-4 0.0 0.0 0.2853255518180218 0.0 4 2.991356475464146E-4 0.0 0.0 0.42766426410885744 0.0 5 2.991356475464146E-4 0.0 0.0 0.7563146288798517 0.0 6 2.991356475464146E-4 0.0 0.0 1.3308544959339987 0.0 7 2.991356475464146E-4 0.0 0.0 1.8541424553751933 0.0 8 2.991356475464146E-4 0.0 0.0 2.5911628349883014 0.0 9 2.991356475464146E-4 0.0 0.0 3.135789137287807 0.0 10 2.991356475464146E-4 0.0 0.0 3.8092930477385596 0.0 11 2.991356475464146E-4 0.0 0.0 4.634458731495344 0.0 12 3.489915888041504E-4 0.0 0.0 5.300484250757436 0.0 13 3.489915888041504E-4 0.0 0.0 5.619213283218142 0.0 14 3.489915888041504E-4 0.0 0.0 5.786479966137844 0.0 15 3.489915888041504E-4 0.0 0.0 5.935100527027155 0.0 16 3.489915888041504E-4 0.0 0.0 6.146788853607501 0.0 17 3.489915888041504E-4 0.0 0.0 6.4154625210454395 0.0 18 3.489915888041504E-4 0.0 0.0 6.6968494535041 0.0 19 3.988475300618862E-4 0.0 0.0 6.889093962993929 0.0 20 3.988475300618862E-4 0.0 0.0 7.075106479826541 0.0 21 3.988475300618862E-4 0.0 0.0 7.275477507741381 0.0 22 3.988475300618862E-4 0.0 0.0 7.488462088794429 0.0 23 3.988475300618862E-4 0.0 0.0 7.6822022765219895 0.0 24 3.988475300618862E-4 0.0 0.0 7.844333797492147 0.0 25 3.988475300618862E-4 0.0 0.0 7.987520060784363 0.0 26 4.985594125773577E-4 0.0 0.0 8.126618136893446 0.0 27 4.985594125773577E-4 0.0 0.0 8.276036392842881 0.0 28 4.985594125773577E-4 0.0 0.0 8.43457828604248 0.0 29 4.985594125773577E-4 0.0 0.0 8.61186601315499 0.0 30 4.985594125773577E-4 0.0 0.0 8.823604195676593 0.0 31 4.985594125773577E-4 4.985594125773577E-5 0.0 8.984638885939079 0.0 32 4.985594125773577E-4 4.985594125773577E-5 0.0 9.174839301837341 0.0 33 4.985594125773577E-4 4.985594125773577E-5 0.0 9.339214340164096 0.0 34 4.985594125773577E-4 4.985594125773577E-5 0.0 9.504636353257263 0.0 35 4.985594125773577E-4 4.985594125773577E-5 0.0 9.698177117219794 0.0 36 4.985594125773577E-4 4.985594125773577E-5 0.0 9.8596605109536 0.0 37 4.985594125773577E-4 4.985594125773577E-5 0.0 10.029320279053675 0.0 38 5.484153538350935E-4 4.985594125773577E-5 0.0 10.236222435273278 0.0 39 5.484153538350935E-4 4.985594125773577E-5 0.0 10.519454037558475 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 53315 0.0 44.210823 1 GTTTTTT 60920 0.0 39.541203 2 TCGACGG 40 3.459936E-7 39.375 2 TTCGACG 35 6.250617E-6 38.57143 1 TGGGCGA 3495 0.0 37.081547 6 TTGGGAC 4480 0.0 36.713173 5 CGAATAT 80 0.0 36.5625 14 TACGGGA 340 0.0 36.39706 4 CGTAGCG 25 0.002107482 36.0 1 TTTAGCG 120 0.0 35.625 1 CGTTTGG 1020 0.0 35.514706 2 GGGCGAT 5570 0.0 35.3456 7 TTGGGAT 7080 0.0 35.3072 5 GCGATGC 480 0.0 35.15625 9 CACGACC 820 0.0 35.121952 27 TTTGGGA 12155 0.0 35.11518 4 CGACGGG 90 0.0 35.0 3 GCGATGT 695 0.0 34.964027 9 TTACACG 1535 0.0 34.739414 34 ACACGAC 830 0.0 34.698795 26 >>END_MODULE