##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933740.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1642477 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.570614991868986 34.0 31.0 34.0 31.0 34.0 2 32.766360807487715 34.0 31.0 34.0 31.0 34.0 3 32.80501949190156 34.0 31.0 34.0 31.0 34.0 4 36.26277506473454 37.0 37.0 37.0 35.0 37.0 5 36.27069541917482 37.0 37.0 37.0 35.0 37.0 6 36.25041994499771 37.0 37.0 37.0 35.0 37.0 7 36.321150920225975 37.0 37.0 37.0 35.0 37.0 8 36.24435471546938 37.0 37.0 37.0 35.0 37.0 9 38.08590500810666 39.0 39.0 39.0 37.0 39.0 10 37.615970269294486 39.0 38.0 39.0 35.0 39.0 11 37.48436599112195 39.0 37.0 39.0 35.0 39.0 12 37.51923162394359 39.0 37.0 39.0 35.0 39.0 13 37.534517073907274 39.0 37.0 39.0 35.0 39.0 14 38.8843478477933 40.0 38.0 41.0 35.0 41.0 15 38.927065036527146 40.0 38.0 41.0 35.0 41.0 16 38.93388887637391 40.0 38.0 41.0 35.0 41.0 17 38.86065984485627 40.0 38.0 41.0 35.0 41.0 18 38.405784677654545 39.0 38.0 41.0 35.0 41.0 19 37.93839609321774 39.0 37.0 41.0 35.0 41.0 20 37.415623476006054 39.0 35.0 41.0 34.0 41.0 21 37.30970905528662 38.0 35.0 41.0 34.0 41.0 22 37.3024340675699 38.0 35.0 41.0 34.0 41.0 23 37.199102331417734 38.0 35.0 41.0 34.0 41.0 24 37.124644058942685 38.0 35.0 41.0 33.0 41.0 25 37.06474854746824 38.0 35.0 40.0 33.0 41.0 26 37.01974030686579 38.0 35.0 40.0 33.0 41.0 27 36.958262429245586 38.0 35.0 40.0 33.0 41.0 28 36.8087480068214 38.0 35.0 40.0 33.0 41.0 29 36.66844345461154 38.0 35.0 40.0 33.0 41.0 30 36.4509834840914 38.0 35.0 40.0 33.0 41.0 31 36.03204550200703 38.0 35.0 40.0 31.0 41.0 32 35.34650591758667 38.0 35.0 40.0 25.0 41.0 33 34.49151251433049 38.0 35.0 41.0 18.0 41.0 34 33.73727607753411 38.0 33.0 41.0 15.0 41.0 35 33.22231057116782 38.0 33.0 41.0 10.0 41.0 36 32.95630014910407 38.0 33.0 41.0 10.0 41.0 37 32.7622481167164 38.0 33.0 41.0 9.0 41.0 38 32.602938123334454 38.0 32.0 40.0 8.0 41.0 39 32.47933578369743 38.0 31.0 40.0 8.0 41.0 40 32.336305470335354 38.0 31.0 40.0 8.0 41.0 41 32.18117574857974 38.0 31.0 40.0 8.0 41.0 42 32.027851227140474 37.0 30.0 40.0 8.0 41.0 43 31.872556510684777 37.0 30.0 40.0 7.0 41.0 44 31.716750371542492 37.0 29.0 40.0 7.0 41.0 45 31.694904099113717 37.0 29.0 40.0 7.0 41.0 46 31.565777176788473 37.0 28.0 40.0 7.0 41.0 47 31.468340195935774 37.0 28.0 40.0 7.0 41.0 48 31.383215716262693 36.0 27.0 40.0 7.0 41.0 49 31.3407091849688 36.0 27.0 40.0 7.0 41.0 50 31.251218129690706 36.0 27.0 40.0 7.0 41.0 51 30.413398787319395 35.0 24.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 4.0 10 11.0 11 2.0 12 10.0 13 18.0 14 20.0 15 36.0 16 82.0 17 219.0 18 509.0 19 1107.0 20 1919.0 21 3278.0 22 5302.0 23 9511.0 24 18661.0 25 39236.0 26 65203.0 27 74429.0 28 64660.0 29 51806.0 30 44005.0 31 41063.0 32 42541.0 33 49728.0 34 74817.0 35 95569.0 36 121291.0 37 153274.0 38 289857.0 39 394195.0 40 112.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.524034126505274 3.4075971840092736 39.80177500202438 38.26659368746107 2 41.37646980749198 3.5319216037728385 40.83113492609029 14.260473662644896 3 16.569668859898798 3.907086674577483 65.89821349096518 13.625030974558547 4 13.812978811879862 3.799383492128048 65.23141572149869 17.156221974493402 5 13.59032729225432 4.505938287111479 64.4273861977976 17.476348222836606 6 16.416181170269052 5.18235567377808 65.28791575163609 13.113547404316773 7 63.806312051858264 1.543644142353287 31.603182266783648 3.0468615390048077 8 65.94351092892016 1.6727174870637458 29.905746016534785 2.47802556748131 9 61.175590282238346 4.255158519723564 31.375172985679555 3.1940782123585296 10 25.450158510591013 27.702853677707513 36.23033990734726 10.616647904354217 11 19.2576212634941 19.45798936606114 47.23554728620248 14.048842084242274 12 16.864284857565735 19.50121675980851 48.4681368445342 15.166361538091552 13 16.821057463818367 18.227469851937045 50.38932052016558 14.56215216407901 14 16.013253153621022 19.499451133866717 49.648792646715904 14.838503065796354 15 15.27662183397393 19.11204844877584 50.14986511226641 15.461464604983814 16 17.31421505445738 19.939091993373424 48.47982650594194 14.266866446227253 17 16.865502530629044 19.236190217579914 48.36895737352791 15.529349878263135 18 17.81114743159265 17.941925518591738 48.63355773018435 15.613369319631264 19 17.27713690967971 19.97251711896118 47.346964371495005 15.403381599864108 20 18.956125413019482 20.85289474373157 46.00082680000999 14.190153043238961 21 18.6844016689427 21.448884824566797 46.06578965793737 13.800923848553131 22 18.342052887194157 19.1259908053507 46.58908465689321 15.942871650561926 23 15.908655037483022 21.833547745265232 46.339705213528106 15.918092003723643 24 15.354126724453371 21.297406295491506 47.34057158791264 16.007895392142476 25 15.95462219562283 22.47313052176682 45.62158252444327 15.950664758167084 26 15.974592033861052 22.42637187613586 45.76155404307031 15.837482046932772 27 16.030483227466807 21.515613308435977 46.36734639206516 16.086557072032058 28 15.053300594163572 21.82404989537144 46.50804851453019 16.614600995934797 29 16.402482348306858 20.269020509876242 46.557607808206754 16.77088933361015 30 17.514765807983917 19.89044595449434 46.813684453420045 15.781103784101697 31 17.62715703172708 21.52651148235257 44.70071727031794 16.14561421560241 32 17.438600357874112 21.653514782855407 44.385766132493785 16.52211872677669 33 17.826124810271317 22.591244808907522 42.213559154861834 17.369071225959328 34 18.269540456274274 23.378957513560312 41.10200629902276 17.24949573114266 35 17.545816471098224 24.95231287865827 39.684208667762164 17.817661982481336 36 18.604339665030317 26.07628599974307 37.60089182375157 17.71848251147505 37 19.012138373931567 25.955127529944104 36.5398724000397 18.492861696084635 38 19.04885121679025 26.501984502674926 36.518624005085 17.930540275449825 39 19.472297024554987 25.864837072299945 35.62473020931191 19.038135693833155 40 20.18786260020688 25.725048204632394 35.229534416615884 18.857554778544845 41 18.517336924657087 26.37973012711898 34.93863232179202 20.16430062643191 42 19.215976844729028 26.90065066360138 35.168346345184744 18.71502614648485 43 18.951437371725753 26.203776369471232 36.167751511893314 18.677034746909698 44 19.53238919022915 26.29114441176345 35.519645023948584 18.656821374058815 45 19.750717970479954 25.197186931689146 35.42649303460566 19.62560206322524 46 19.592664006862805 25.40857497547911 35.40494022138514 19.593820796272947 47 18.3730426666553 26.48371940672533 36.1233673287358 19.01987059788356 48 18.533105790826905 25.87530906064438 36.53037455014591 19.061210598382807 49 19.532693608494974 25.017336620238822 36.25712871473999 19.192841056526213 50 18.546865496442262 25.09057965499669 36.14802520826776 20.21452964029329 51 18.023570497486418 24.473950015738424 35.866986265256685 21.635493221518477 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 831.0 1 2348.5 2 3866.0 3 65070.0 4 126274.0 5 83314.0 6 40354.0 7 38982.0 8 37610.0 9 37304.5 10 36999.0 11 36282.5 12 35566.0 13 34336.0 14 33106.0 15 31386.0 16 29666.0 17 27805.5 18 25945.0 19 24098.5 20 22252.0 21 21401.0 22 20550.0 23 19744.5 24 18939.0 25 19236.0 26 20996.5 27 22460.0 28 24006.0 29 25552.0 30 28524.5 31 31497.0 32 35121.0 33 38745.0 34 43413.5 35 48082.0 36 51684.5 37 55287.0 38 57234.0 39 59181.0 40 64065.5 41 68950.0 42 73479.5 43 78009.0 44 82379.5 45 86750.0 46 94372.0 47 101994.0 48 106877.5 49 111761.0 50 110703.0 51 109645.0 52 98896.5 53 88148.0 54 78715.5 55 69283.0 56 61063.0 57 52843.0 58 47230.0 59 41617.0 60 36476.0 61 31335.0 62 27241.0 63 23147.0 64 19186.0 65 15225.0 66 12646.5 67 10068.0 68 8278.0 69 6488.0 70 5348.0 71 4208.0 72 3777.0 73 3346.0 74 3236.5 75 2702.5 76 2278.0 77 1702.5 78 1127.0 79 831.5 80 536.0 81 371.0 82 206.0 83 127.5 84 49.0 85 34.0 86 19.0 87 14.0 88 9.0 89 9.5 90 10.0 91 7.0 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1642477.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.99750108967739 #Duplication Level Percentage of deduplicated Percentage of total 1 74.93491874003848 27.724047377394605 2 7.82879786993593 5.7929191544763725 3 3.576892894697529 3.9700829630769348 4 2.285090829862669 3.3817060187142367 5 1.6460519393962654 3.044990421073946 6 1.3385020365878955 2.971273833431764 7 1.1002324282117857 2.849409532316476 8 0.9423866163890248 2.7892759893400267 9 0.8130806854854635 2.7073758192519666 >10 5.387645864790147 32.53841182932706 >50 0.09091733008462606 2.313605663069311 >100 0.05036386910380302 3.484974780469953 >500 0.0034676388304818884 0.912719968026599 >1k 0.0014861309273493809 0.919134666597067 >5k 0.0 0.0 >10k+ 1.6512565859437564E-4 4.600071983433656 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 75297 4.5843564323883985 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGTGCCATCGTATGCC 3815 0.23227113682566025 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGTGCCATCGTATGC 2157 0.13132603987757516 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1683 0.10246718827721789 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8265095949593206E-4 0.0 0.0 0.08578506730992276 0.0 2 1.8265095949593206E-4 0.0 0.0 0.25035358181575756 0.0 3 1.8265095949593206E-4 0.0 0.0 0.4011015070530668 0.0 4 1.8265095949593206E-4 0.0 0.0 0.5866139982477685 0.0 5 1.8265095949593206E-4 0.0 0.0 1.0098771550530083 0.0 6 1.8265095949593206E-4 0.0 0.0 1.782125411801809 0.0 7 1.8265095949593206E-4 0.0 0.0 2.5047534912208818 0.0 8 1.8265095949593206E-4 0.0 0.0 3.486685049471012 0.0 9 1.8265095949593206E-4 0.0 0.0 4.14849035937794 0.0 10 1.8265095949593206E-4 0.0 0.0 4.988684773059227 0.0 11 1.8265095949593206E-4 0.0 0.0 6.15832063401801 0.0 12 1.8265095949593206E-4 0.0 0.0 7.099155726381556 0.0 13 1.8265095949593206E-4 0.0 0.0 7.503362299746054 0.0 14 1.8265095949593206E-4 0.0 0.0 7.705496028254886 0.0 15 1.8265095949593206E-4 0.0 0.0 7.891008519449588 0.0 16 1.8265095949593206E-4 0.0 0.0 8.198227433321746 0.0 17 1.8265095949593206E-4 0.0 0.0 8.617594036324405 0.0 18 2.4353461266124273E-4 0.0 0.0 9.040613658516984 0.0 19 2.4353461266124273E-4 0.0 0.0 9.32110464864957 0.0 20 3.044182658265534E-4 0.0 0.0 9.603726566642942 0.0 21 3.044182658265534E-4 0.0 0.0 9.903578558482097 0.0 22 3.044182658265534E-4 0.0 0.0 10.20166492437946 0.0 23 3.044182658265534E-4 0.0 0.0 10.461516356089005 0.0 24 3.653019189918641E-4 0.0 0.0 10.660301483673743 0.0 25 3.653019189918641E-4 0.0 0.0 10.836377008627823 0.0 26 3.653019189918641E-4 0.0 0.0 11.001797894277972 0.0 27 3.653019189918641E-4 0.0 0.0 11.177386350006728 0.0 28 3.653019189918641E-4 0.0 0.0 11.357784614335543 0.0 29 3.653019189918641E-4 0.0 0.0 11.545915102616354 0.0 30 4.261855721571748E-4 0.0 0.0 11.781108654793949 0.0 31 4.8706922532248546E-4 0.0 0.0 11.96053278067212 0.0 32 4.8706922532248546E-4 0.0 0.0 12.171981708115243 0.0 33 9.132547974796603E-4 0.0 0.0 12.352197321484562 0.0 34 9.132547974796603E-4 0.0 0.0 12.524558943595558 0.0 35 9.132547974796603E-4 0.0 0.0 12.732476619155094 0.0 36 9.132547974796603E-4 0.0 0.0 12.916345251714331 0.0 37 9.132547974796603E-4 0.0 0.0 13.10605871497744 0.0 38 9.132547974796603E-4 0.0 0.0 13.335529203757496 0.0 39 9.132547974796603E-4 0.0 0.0 13.609140341082401 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 43305 0.0 44.303772 1 GTTTTTT 49385 0.0 39.632984 2 TGGGCGA 2710 0.0 38.85609 6 GCCGATG 205 0.0 38.414635 9 GCCGATA 30 1.1401354E-4 37.499996 9 TTGGGCG 2070 0.0 36.95652 5 TTGGGAC 3445 0.0 36.835995 5 AACACGT 540 0.0 36.666664 41 TTTACGG 215 0.0 36.627907 2 GGGCGAT 4195 0.0 36.579258 7 CTTTGCG 505 0.0 36.534657 1 GGGCCGA 685 0.0 36.459854 7 GGCCGAT 680 0.0 36.066177 8 CTCGTAG 25 0.0021073713 36.0 1 TCGATCA 25 0.0021073713 36.0 17 GCTACGA 100 0.0 36.0 10 CACGACC 675 0.0 35.666668 27 CGTGCGG 355 0.0 35.492958 2 ACACGAC 685 0.0 35.474453 26 ACACGTG 565 0.0 35.44248 42 >>END_MODULE