##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933739.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1647499 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.50325250576783 34.0 31.0 34.0 31.0 34.0 2 32.71863897944703 34.0 31.0 34.0 31.0 34.0 3 32.76499651896602 34.0 31.0 34.0 31.0 34.0 4 36.194913623619804 37.0 37.0 37.0 35.0 37.0 5 36.25241411375667 37.0 37.0 37.0 35.0 37.0 6 36.24958254906376 37.0 37.0 37.0 35.0 37.0 7 36.260626561837064 37.0 37.0 37.0 35.0 37.0 8 36.21384534983026 37.0 37.0 37.0 35.0 37.0 9 38.065721435946244 39.0 39.0 39.0 37.0 39.0 10 37.642079297164976 39.0 38.0 39.0 35.0 39.0 11 37.499037025212154 39.0 37.0 39.0 35.0 39.0 12 37.51048407313146 39.0 37.0 39.0 35.0 39.0 13 37.53435419384169 39.0 37.0 39.0 35.0 39.0 14 38.91525882565028 40.0 38.0 41.0 35.0 41.0 15 38.94611772146751 40.0 38.0 41.0 35.0 41.0 16 39.00684370673366 40.0 38.0 41.0 35.0 41.0 17 38.95076962110448 40.0 38.0 41.0 35.0 41.0 18 38.53470927751701 39.0 38.0 41.0 35.0 41.0 19 38.097949680090856 39.0 37.0 41.0 35.0 41.0 20 37.534921113760916 39.0 35.0 41.0 34.0 41.0 21 37.46460726228059 39.0 35.0 41.0 34.0 41.0 22 37.44082576074401 39.0 35.0 41.0 34.0 41.0 23 37.29086208853541 38.0 35.0 41.0 34.0 41.0 24 37.2198374627238 38.0 35.0 41.0 34.0 41.0 25 37.17398371713731 38.0 35.0 41.0 34.0 41.0 26 37.147954566285016 38.0 35.0 41.0 34.0 41.0 27 37.090909311629325 38.0 35.0 41.0 33.0 41.0 28 36.9895896750165 38.0 35.0 41.0 33.0 41.0 29 36.80309001705009 38.0 35.0 41.0 33.0 41.0 30 36.504189076897774 38.0 35.0 41.0 33.0 41.0 31 36.08331294890012 38.0 35.0 41.0 31.0 41.0 32 35.474482230338225 38.0 35.0 41.0 25.0 41.0 33 34.5745788009583 38.0 35.0 41.0 18.0 41.0 34 33.83237319112182 38.0 34.0 41.0 15.0 41.0 35 33.37105819184109 38.0 33.0 41.0 10.0 41.0 36 33.0936279779229 38.0 33.0 41.0 10.0 41.0 37 32.92668341528584 38.0 33.0 41.0 10.0 41.0 38 32.754578303234176 38.0 33.0 41.0 9.0 41.0 39 32.668252302429316 38.0 32.0 41.0 8.0 41.0 40 32.516269812606865 38.0 31.0 41.0 8.0 41.0 41 32.37784544937508 38.0 31.0 41.0 8.0 41.0 42 32.173198891167765 38.0 31.0 40.0 8.0 41.0 43 32.05338819629026 38.0 30.0 40.0 8.0 41.0 44 31.89744758570415 37.0 30.0 40.0 7.0 41.0 45 31.84571219770088 37.0 30.0 40.0 7.0 41.0 46 31.709600430713465 37.0 29.0 40.0 7.0 41.0 47 31.66434334709763 37.0 29.0 40.0 7.0 41.0 48 31.543530527180895 37.0 28.0 40.0 7.0 41.0 49 31.50436752920639 36.0 28.0 40.0 7.0 41.0 50 31.36052707770991 36.0 27.0 40.0 7.0 41.0 51 30.636437412101614 35.0 25.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 5.0 10 9.0 11 15.0 12 11.0 13 27.0 14 27.0 15 45.0 16 89.0 17 235.0 18 555.0 19 966.0 20 1884.0 21 3111.0 22 5228.0 23 8929.0 24 18293.0 25 38232.0 26 64014.0 27 74113.0 28 64210.0 29 51344.0 30 43375.0 31 40665.0 32 41465.0 33 48276.0 34 73333.0 35 94253.0 36 118483.0 37 147844.0 38 283397.0 39 424855.0 40 210.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.688691161572784 3.543006702887225 39.69477371458192 38.07352842095807 2 41.27632247424733 3.5919293425974765 40.84038897747434 14.291359205680854 3 16.81227120623442 3.975662504195754 65.56562401555327 13.646442274016554 4 14.004075268027478 3.879395374443323 64.94140512376639 17.175124233762812 5 13.6925728027756 4.547013382102205 64.2535139626792 17.506899852443006 6 16.516853727984053 5.208136696896326 65.10213359765316 13.17287597746645 7 63.93515261617762 1.5808810809596852 31.373615401284006 3.110350901578696 8 66.09163343953472 1.7040374531335074 29.72548086523876 2.4788482420930147 9 61.30437711950053 4.307134632555163 31.16766686960053 3.2208213783437807 10 25.57810353754388 27.808757395300393 35.990370859102185 10.62276820805354 11 19.365353180791008 19.603957270990758 46.98467191785852 14.046017630359714 12 16.98689953681307 19.601165160039553 48.27414159280218 15.137793710345196 13 16.872483685877807 18.309206864465473 50.24919590239508 14.569113547261637 14 16.08195209830173 19.68049752989228 49.38133498108345 14.856215390722543 15 15.255426558680766 19.276369818737372 49.98940818780467 15.478795434777199 16 17.44347037539932 19.99388163513301 48.288344939814834 14.274303049652836 17 16.939737140963363 19.290208977365083 48.2935649733323 15.476488908339247 18 17.978705905132568 18.020284079079865 48.42230556740854 15.578704448379026 19 17.361103102338756 20.083957562341464 47.17386778383477 15.38107155148501 20 19.083896257296665 20.90848006584526 45.83505058273176 14.172573094126308 21 18.760132783085147 21.556189108460764 45.872744080573035 13.81093402788105 22 18.52747710317275 19.088448612108415 46.426067633424964 15.958006651293871 23 16.02610987927762 21.91879934373253 46.19608266833546 15.85900810865439 24 15.444925914977794 21.302349804157696 47.208344284275746 16.04437999658877 25 15.981193311801706 22.59855696422274 45.490649766706994 15.929599957268561 26 16.087172131819198 22.486447639725426 45.58418548357237 15.842194744883 27 16.17154244099693 21.60626501138999 46.10776698498755 16.11442556262553 28 15.198613170630148 21.882926787815958 46.344671529390915 16.57378851216298 29 16.454334721902715 20.453912263376182 46.35086273193489 16.74089028278621 30 17.66975275857527 19.93391194774625 46.64834394436658 15.747991349311896 31 17.724198922123776 21.586173952154144 44.51954143826491 16.17008568745717 32 17.506414267929753 21.74356403251231 44.28196921515582 16.468052484402115 33 17.93585307183798 22.681895406309806 42.02375843627219 17.358493085580022 34 18.30344054837059 23.5342783212615 41.028249486039144 17.13403164432877 35 17.56680884176561 25.065447687676894 39.596139360327385 17.771604110230115 36 18.61925257617759 26.153399789620508 37.552860426622416 17.67448720757949 37 19.059738427762323 25.86144210102707 36.47789771040833 18.600921760802283 38 19.141013135668064 26.557284708518793 36.42442271588632 17.87727943992682 39 19.437280386816624 25.863323741015925 35.61076516586657 19.088630706300886 40 20.206628350002035 25.87018262226563 35.20257068441317 18.720618343319178 41 18.596551500183004 26.396616932696165 34.897805704282675 20.109025862838156 42 19.25955645496598 27.016222771607147 35.088215531542055 18.63600524188482 43 18.935064603984586 26.32305087893832 36.087669855945286 18.654214661131814 44 19.574093823425688 26.404750473293152 35.43504427013309 18.586111433148062 45 19.65828203841095 25.45701089955138 35.260476637618595 19.62423042441907 46 19.62714393149859 25.54775450546556 35.287972860681556 19.537128702354295 47 18.410511933542903 26.635099626767605 36.10266227779198 18.85172616189752 48 18.59606591566975 26.013308657546986 36.396562304438426 18.99406312234484 49 19.513638551525673 25.2012292571953 36.19401286434772 19.091119326931306 50 18.56778061777276 25.272852972900132 36.015499857663045 20.14386655166407 51 18.117825868179587 24.627086268337646 35.71619770330665 21.538890160176123 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 792.0 1 2328.0 2 3864.0 3 64385.5 4 124907.0 5 82862.0 6 40817.0 7 39314.0 8 37811.0 9 37581.5 10 37352.0 11 36432.5 12 35513.0 13 34110.0 14 32707.0 15 31194.0 16 29681.0 17 27790.5 18 25900.0 19 24060.0 20 22220.0 21 21241.5 22 20263.0 23 19525.0 24 18787.0 25 19210.5 26 20862.0 27 22090.0 28 23909.5 29 25729.0 30 29003.0 31 32277.0 32 35512.5 33 38748.0 34 43355.0 35 47962.0 36 52066.0 37 56170.0 38 57922.0 39 59674.0 40 64797.0 41 69920.0 42 74367.5 43 78815.0 44 82988.5 45 87162.0 46 94596.5 47 102031.0 48 106971.5 49 111912.0 50 110873.0 51 109834.0 52 99177.5 53 88521.0 54 78873.5 55 69226.0 56 61239.0 57 53252.0 58 47544.0 59 41836.0 60 36858.0 61 31880.0 62 27595.0 63 23310.0 64 19303.0 65 15296.0 66 12653.0 67 10010.0 68 8263.5 69 6517.0 70 5389.5 71 4262.0 72 3854.0 73 3446.0 74 3322.0 75 2717.0 76 2236.0 77 1689.0 78 1142.0 79 827.0 80 512.0 81 352.0 82 192.0 83 124.0 84 56.0 85 34.5 86 13.0 87 8.0 88 3.0 89 8.0 90 13.0 91 9.5 92 6.0 93 3.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1647499.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.97843916849783 #Duplication Level Percentage of deduplicated Percentage of total 1 74.72188173248767 27.63098558200484 2 7.930152425360385 5.864893181162089 3 3.5805022465674465 3.972041535520924 4 2.3222191102341236 3.4348815241486275 5 1.6857782248467468 3.116872376953684 6 1.3390002056359704 2.970848259042949 7 1.1238584536539702 2.909097202371176 8 0.9292914559416988 2.749099805867591 9 0.8089588342223971 2.6922631537000647 >10 5.410711201110254 32.578786696290265 >50 0.09201259807963286 2.3131266185464856 >100 0.050335133866238974 3.3907005851338043 >500 0.0036426348705550222 0.9343821391241804 >1k 0.0014901688106815998 0.905911678820613 >5k 0.0 0.0 >10k+ 1.6557431229795552E-4 4.536109661312703 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 74087 4.496937479172977 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGTGCCATCGTATGCC 3647 0.22136583997926554 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGTGCCATCGTATGC 2116 0.12843710375544992 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1676 0.1017299555265284 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.641883849398391E-4 0.0 0.0 0.08248866918887356 0.0 2 3.641883849398391E-4 0.0 0.0 0.24515948112866837 0.0 3 3.641883849398391E-4 0.0 0.0 0.3902278544630376 0.0 4 3.641883849398391E-4 0.0 0.0 0.5684373708269322 0.0 5 3.641883849398391E-4 0.0 0.0 0.9810021128996133 0.0 6 3.641883849398391E-4 0.0 0.0 1.7203045343274868 0.0 7 3.641883849398391E-4 0.0 0.0 2.4353884281568607 0.0 8 3.641883849398391E-4 0.0 0.0 3.4013374211456275 0.0 9 4.8558451325311883E-4 0.0 0.0 4.046922031515649 0.0 10 5.462825774097587E-4 0.0 0.0 4.887043937507701 0.0 11 5.462825774097587E-4 0.0 0.0 6.023068906263372 0.0 12 5.462825774097587E-4 0.0 0.0 6.943494351134659 0.0 13 5.462825774097587E-4 0.0 0.0 7.327591701117877 0.0 14 5.462825774097587E-4 0.0 0.0 7.520611545135991 0.0 15 5.462825774097587E-4 0.0 0.0 7.702645039541754 0.0 16 6.069806415663986E-4 0.0 0.0 8.0056497758117 0.0 17 6.069806415663986E-4 0.0 0.0 8.40091556959974 0.0 18 6.069806415663986E-4 0.0 0.0 8.806742826551034 0.0 19 6.069806415663986E-4 0.0 0.0 9.073085932070368 0.0 20 6.069806415663986E-4 0.0 0.0 9.338093680178257 0.0 21 6.069806415663986E-4 0.0 0.0 9.6259845984732 0.0 22 6.069806415663986E-4 0.0 0.0 9.919034852221458 0.0 23 6.069806415663986E-4 0.0 0.0 10.185377957740794 0.0 24 6.069806415663986E-4 0.0 0.0 10.380643630132704 0.0 25 6.069806415663986E-4 0.0 0.0 10.551690774926115 0.0 26 6.069806415663986E-4 0.0 0.0 10.708655968835187 0.0 27 6.069806415663986E-4 0.0 0.0 10.876243323971668 0.0 28 6.069806415663986E-4 0.0 0.0 11.053299577116587 0.0 29 6.676787057230384E-4 0.0 0.0 11.236971919254579 0.0 30 6.676787057230384E-4 0.0 0.0 11.461736850826616 0.0 31 6.676787057230384E-4 0.0 0.0 11.642010101371836 0.0 32 7.283767698796782E-4 0.0 0.0 11.848383519504413 0.0 33 0.0013353574114460768 0.0 0.0 12.029810033268609 0.0 34 0.0013353574114460768 0.0 0.0 12.208140945760817 0.0 35 0.0013353574114460768 0.0 0.0 12.407958972964476 0.0 36 0.0013353574114460768 0.0 0.0 12.59539459508018 0.0 37 0.0013353574114460768 0.0 0.0 12.783558593965763 0.0 38 0.0013353574114460768 0.0 0.0 13.00632048942063 0.0 39 0.0013353574114460768 0.0 0.0 13.277822930393281 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 42190 0.0 44.32804 1 GTTTTTT 48915 0.0 39.116837 2 TACGCGG 75 0.0 39.0 2 TTATCCG 35 6.2499385E-6 38.571426 1 CGCACGG 35 6.2499385E-6 38.571426 2 TGGGCGA 2810 0.0 38.514236 6 GGGACCG 960 0.0 38.20312 7 TTGGGAC 3450 0.0 37.043476 5 GCGAGAC 755 0.0 36.953644 21 TTGGGCG 2250 0.0 36.6 5 GTTTGCG 240 0.0 36.5625 1 TACGGGA 290 0.0 36.465515 4 GACACGA 725 0.0 36.310345 25 ACGACCA 725 0.0 36.310345 28 GGGCGAT 4335 0.0 36.280277 7 TCAAGCG 770 0.0 36.233765 17 GACCGAT 810 0.0 36.11111 9 TTGGGAT 6450 0.0 35.93023 5 CGACCAA 730 0.0 35.753426 29 ACACGAC 750 0.0 35.7 26 >>END_MODULE