##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933737.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2662002 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.41274536983819 34.0 31.0 34.0 31.0 34.0 2 32.63015467306185 34.0 31.0 34.0 31.0 34.0 3 32.70018204343948 34.0 31.0 34.0 31.0 34.0 4 36.14033648359393 37.0 35.0 37.0 35.0 37.0 5 36.1965152543086 37.0 35.0 37.0 35.0 37.0 6 36.18868505733655 37.0 36.0 37.0 35.0 37.0 7 36.19470158174186 37.0 37.0 37.0 35.0 37.0 8 36.13452206271821 37.0 37.0 37.0 35.0 37.0 9 37.9709523133341 39.0 39.0 39.0 35.0 39.0 10 37.44968711518624 39.0 37.0 39.0 34.0 39.0 11 37.32592800456198 39.0 37.0 39.0 34.0 39.0 12 37.394360710472796 39.0 37.0 39.0 34.0 39.0 13 37.455003790380324 39.0 37.0 39.0 35.0 39.0 14 38.78789384831416 40.0 38.0 41.0 35.0 41.0 15 38.82776421655581 40.0 38.0 41.0 35.0 41.0 16 38.895412926060914 40.0 38.0 41.0 35.0 41.0 17 38.87289040353839 40.0 38.0 41.0 35.0 41.0 18 38.52015250176371 39.0 38.0 41.0 35.0 41.0 19 38.1665043827916 39.0 37.0 41.0 35.0 41.0 20 37.65378651105446 39.0 35.0 41.0 34.0 41.0 21 37.59195372505355 39.0 35.0 41.0 34.0 41.0 22 37.568573952987265 39.0 35.0 41.0 34.0 41.0 23 37.422771282666204 39.0 35.0 41.0 34.0 41.0 24 37.34610191878143 39.0 35.0 41.0 34.0 41.0 25 37.29848287116238 39.0 35.0 41.0 33.0 41.0 26 37.26473045474797 39.0 35.0 41.0 33.0 41.0 27 37.186693698952894 39.0 35.0 41.0 33.0 41.0 28 37.10341765333009 39.0 35.0 41.0 33.0 41.0 29 36.92640952185611 38.0 35.0 41.0 33.0 41.0 30 36.68812645520176 38.0 35.0 41.0 33.0 41.0 31 36.340725889762666 38.0 35.0 41.0 31.0 41.0 32 35.866005359875764 38.0 35.0 41.0 29.0 41.0 33 35.104064534887655 38.0 35.0 41.0 21.0 41.0 34 34.50133433408389 39.0 35.0 41.0 18.0 41.0 35 34.13206150859391 39.0 34.0 41.0 15.0 41.0 36 33.89672659900331 39.0 34.0 41.0 12.0 41.0 37 33.7663213626436 39.0 34.0 41.0 10.0 41.0 38 33.64491687083631 38.0 34.0 41.0 10.0 41.0 39 33.5785033219359 39.0 33.0 41.0 10.0 41.0 40 33.44737306733804 38.0 33.0 41.0 10.0 41.0 41 33.308910737106885 38.0 33.0 41.0 10.0 41.0 42 33.10716070085597 38.0 33.0 41.0 10.0 41.0 43 33.00086588965748 38.0 33.0 41.0 10.0 41.0 44 32.863874632701254 38.0 32.0 40.0 9.0 41.0 45 32.820006897064694 38.0 32.0 40.0 9.0 41.0 46 32.67686688439753 38.0 32.0 40.0 8.0 41.0 47 32.6546659243682 38.0 32.0 40.0 8.0 41.0 48 32.53397104885721 38.0 31.0 40.0 8.0 41.0 49 32.50702441245348 38.0 31.0 40.0 8.0 41.0 50 32.35962369675154 37.0 31.0 40.0 8.0 41.0 51 31.579655837974578 36.0 29.0 40.0 8.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 11.0 10 11.0 11 20.0 12 20.0 13 27.0 14 38.0 15 76.0 16 154.0 17 324.0 18 700.0 19 1525.0 20 2776.0 21 4546.0 22 7475.0 23 13134.0 24 25723.0 25 54750.0 26 91184.0 27 101728.0 28 88052.0 29 71040.0 30 62062.0 31 61082.0 32 65602.0 33 79741.0 34 117063.0 35 151491.0 36 198339.0 37 255267.0 38 493403.0 39 714297.0 40 338.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 17.948145794030207 3.5734007712991946 44.33377585741859 34.14467757725201 2 37.6008357619566 3.4734008464306187 43.34899072202049 15.576772669592284 3 15.93529982321576 3.7031151742185022 64.11685641107707 16.24472859148866 4 13.863287856282602 3.8936860302884817 63.9452562394769 18.29776987395201 5 13.654948418521098 4.670770345026036 63.19307799167694 18.481203244775923 6 17.0593410523358 5.408636056622046 64.26569176131348 13.266331129728679 7 66.84532919208927 1.5146119349271714 28.001293763115132 3.6387651098684373 8 69.1133590433065 1.763109118625756 26.100017956410248 3.023513881657489 9 63.584700537415074 4.678846973067639 27.8950579300842 3.841394559433088 10 27.074059298227425 26.039424463242327 34.59024448516568 12.296271753364572 11 19.02327646635878 20.115461971854266 44.90146889446364 15.959792667323317 12 16.101866189431863 19.038453013934625 47.34196292865295 17.517717867980565 13 16.951039105154692 18.35964060132186 49.287491143883436 15.401829149640008 14 16.292136519807272 20.063809118099837 47.918559039399675 15.72549532269322 15 15.086126907492933 20.55374113167458 48.67956522947766 15.680566731354823 16 16.693939373449005 20.837888175891678 46.82366880265304 15.644503648006275 17 16.960205138839115 20.580525484203243 45.938169843598914 16.521099533358726 18 16.88586259514456 20.059639324087662 46.46033323791642 16.59416484285136 19 16.967906109762502 22.026279469361782 44.88302412995933 16.122790290916384 20 17.875493707367614 22.828833336714247 43.47926861061712 15.816404345301018 21 18.144764729703432 22.756256381475296 43.99865214225985 15.100326746561423 22 17.705621558511226 21.102876707079858 43.80004222386009 17.391459510548827 23 15.376284465601453 23.12943416270912 43.74545924458359 17.74882212710584 24 15.26381272440817 22.66696268447582 44.57795298425771 17.491271606858298 25 16.10746348049325 23.61256678244419 43.04068892510223 17.239280811960324 26 16.048936101475505 23.611026588259513 43.101169721134696 17.238867589130287 27 15.984473339989977 22.597428551894403 43.88572961252471 17.532368495590912 28 15.814751453980877 22.46125284654181 43.746172993108196 17.977822706369114 29 16.43090425927554 21.52766977635629 43.05556494698351 18.98586101738466 30 17.417192023146487 21.23007420730713 42.9140924762641 18.438641293282274 31 16.528838069993938 22.81020074365083 41.62645257216185 19.034508614193378 32 16.37902601125018 23.12763100854169 40.96574683264701 19.52759614756112 33 16.864976059371855 23.361402433206287 38.956882827285625 20.81673868013623 34 16.362271703777832 24.19303216150852 38.11383312258969 21.330863012123956 35 16.24367675155766 24.459485755457735 37.24080597986027 22.05603151312433 36 16.79093404137187 25.183715113662576 36.037914321627106 21.98743652333845 37 16.500701351839705 26.211738383367106 36.30470600698271 20.982854257810473 38 16.833834084271913 25.787283405497064 35.939417025231386 21.439465484999637 39 17.194201957774638 25.124060763290185 35.95414278426537 21.727594494669802 40 18.219933719058062 24.713429967370423 36.536786974615346 20.52984933895617 41 17.496756200784223 25.01703605031101 36.209589624650924 21.27661812425385 42 17.9281232696294 25.89900383245392 36.03472123612229 20.138151661794392 43 17.747544892903914 25.52191921719067 36.70433004933881 20.02620584056661 44 18.4286863796496 26.019589767400625 35.304781889720594 20.24694196322918 45 18.656860513252806 25.02515024406443 34.94629230180894 21.371696940873825 46 18.71797992638623 25.40306130498775 34.84362521140104 21.035333557224973 47 17.955884330665416 25.801070021735523 35.32116054007473 20.92188510752434 48 17.97421639803426 25.258245485916238 35.64520237024615 21.122335745803348 49 18.871548556312128 24.538674275977254 35.46894405038013 21.12083311733049 50 17.862157879671013 24.399793839373523 35.89400007963931 21.844048201316152 51 17.725944608606607 23.76512113815091 35.53637450309955 22.97255975014294 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1036.0 1 2655.0 2 4274.0 3 87190.0 4 170106.0 5 111541.0 6 52976.0 7 51019.5 8 49063.0 9 49304.0 10 49545.0 11 49024.0 12 48503.0 13 46670.0 14 44837.0 15 43028.5 16 41220.0 17 38980.5 18 36741.0 19 34492.5 20 32244.0 21 31390.5 22 30537.0 23 29940.5 24 29344.0 25 30685.5 26 33984.5 27 35942.0 28 38930.5 29 41919.0 30 47268.5 31 52618.0 32 58397.0 33 64176.0 34 73200.0 35 82224.0 36 88017.0 37 93810.0 38 100327.5 39 106845.0 40 113608.5 41 120372.0 42 129853.5 43 139335.0 44 151712.0 45 164089.0 46 181345.5 47 198602.0 48 208159.5 49 217717.0 50 208225.0 51 198733.0 52 173110.5 53 147488.0 54 127377.0 55 107266.0 56 93218.5 57 79171.0 58 69236.5 59 59302.0 60 51662.0 61 44022.0 62 37329.0 63 30636.0 64 25951.0 65 21266.0 66 17178.5 67 13091.0 68 10559.0 69 8027.0 70 6356.5 71 4686.0 72 3987.0 73 3288.0 74 2768.0 75 1831.5 76 1415.0 77 1063.5 78 712.0 79 519.0 80 326.0 81 239.0 82 152.0 83 93.0 84 34.0 85 33.0 86 32.0 87 17.5 88 3.0 89 2.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2662002.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.04366971892611 #Duplication Level Percentage of deduplicated Percentage of total 1 73.65786233941026 27.285575247032394 2 8.406415416574275 6.2280895242333205 3 3.8176535037432866 4.2425968648190215 4 2.530339382815968 3.749322254953042 5 1.813389177787076 3.3587294886909715 6 1.4366915120286434 3.1932195515744173 7 1.1620755886325502 3.013328100561158 8 1.0061488024497094 2.9817155140832052 9 0.8103050197413145 2.7015004370596634 >10 5.214691165462041 30.658539148105156 >50 0.08319555240868412 2.121776212479609 >100 0.05612653401440299 3.9689631782331043 >500 0.0027572426632105 0.6890179898657706 >1k 0.002144522071383283 1.4846003630315459 >5k 1.0212009863729918E-4 0.19523563444020403 >10k+ 1.0212009863729918E-4 4.127790490837385 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 109117 4.099057776816096 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCC 5161 0.19387663871026392 No Hit CTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCTGCT 2866 0.1076633300801427 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGC 2826 0.10616070160728655 No Hit CCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCTGC 2729 0.10251682756061041 No Hit CGCTGTCTCTTATACACATCTGACGCTCACCTCTTCGTATGCCGTCTTCTG 2680 0.1006761076813616 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.756571182140359E-4 0.0 0.0 0.1161156152399585 0.0 2 3.756571182140359E-4 0.0 0.0 0.3223138074276428 0.0 3 3.756571182140359E-4 0.0 0.0 0.5574375977178079 0.0 4 4.5078854185684307E-4 0.0 0.0 0.8504877156365773 0.0 5 4.883542536782467E-4 0.0 0.0 1.4945142791027204 0.0 6 4.883542536782467E-4 0.0 0.0 2.626594570552539 0.0 7 4.883542536782467E-4 0.0 0.0 3.678847724381875 0.0 8 4.883542536782467E-4 0.0 0.0 5.112054761792065 0.0 9 5.259199654996503E-4 0.0 0.0 6.1438721683905575 0.0 10 5.259199654996503E-4 0.0 0.0 7.260437820858136 0.0 11 5.259199654996503E-4 0.0 0.0 8.70284845766457 0.0 12 5.634856773210538E-4 0.0 0.0 9.863441124386833 0.0 13 5.634856773210538E-4 0.0 0.0 10.466934284797683 0.0 14 5.634856773210538E-4 0.0 0.0 10.804837862631208 0.0 15 6.010513891424574E-4 0.0 0.0 11.065280942688998 0.0 16 6.010513891424574E-4 0.0 0.0 11.44961574033378 0.0 17 6.38617100963861E-4 0.0 0.0 11.919562795219537 0.0 18 6.761828127852647E-4 0.0 0.0 12.429630030330555 0.0 19 6.761828127852647E-4 0.0 0.0 12.756301460329482 0.0 20 6.761828127852647E-4 0.0 0.0 13.084099861683049 0.0 21 6.761828127852647E-4 0.0 0.0 13.426586456358786 0.0 22 7.137485246066682E-4 0.0 0.0 13.754197029153246 0.0 23 7.137485246066682E-4 0.0 0.0 14.069298219911179 0.0 24 7.137485246066682E-4 0.0 0.0 14.324970454567653 0.0 25 7.137485246066682E-4 0.0 0.0 14.556826027929356 0.0 26 7.137485246066682E-4 0.0 0.0 14.776848402067316 0.0 27 7.137485246066682E-4 0.0 0.0 15.020161517534547 0.0 28 7.137485246066682E-4 0.0 0.0 15.256337147755712 0.0 29 7.137485246066682E-4 0.0 0.0 15.50629939421533 0.0 30 7.137485246066682E-4 0.0 0.0 15.784999410218324 0.0 31 7.137485246066682E-4 0.0 0.0 16.03135534834309 0.0 32 7.137485246066682E-4 0.0 0.0 16.293526451144665 0.0 33 7.137485246066682E-4 0.0 0.0 16.539732126422145 0.0 34 7.513142364280718E-4 0.0 0.0 16.794916006824938 0.0 35 7.513142364280718E-4 0.0 0.0 17.067868468919258 0.0 36 8.26445660070879E-4 0.0 0.0 17.32248886364473 0.0 37 8.26445660070879E-4 0.0 0.0 17.59063291462591 0.0 38 8.26445660070879E-4 0.0 0.0 17.867567342173295 0.0 39 8.26445660070879E-4 0.0 0.0 18.21587662218135 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 59495 0.0 44.3344 1 GTTTTTT 67805 0.0 39.478287 2 CGGTAAC 30 1.1403253E-4 37.500004 6 TCGTTTG 810 0.0 36.944443 1 TGGGCGA 4300 0.0 36.627907 6 TCTTGCG 735 0.0 36.428574 1 GCGATAG 105 0.0 36.42857 9 TTGGGAC 5985 0.0 36.165413 5 TACGGGA 350 0.0 36.0 4 TAGGGCG 265 0.0 35.660378 5 CGTTTGG 1460 0.0 35.59931 2 TTGGGCG 3410 0.0 35.498535 5 TTGGGAT 9890 0.0 35.126392 5 TTTGGGA 16380 0.0 34.78022 4 ATGGGCG 395 0.0 34.746838 5 TCTGGGA 7300 0.0 34.70548 4 GGGCGAT 6735 0.0 34.443207 7 TTTTGCG 1905 0.0 34.370075 1 GCCGATT 420 0.0 34.285713 9 GTTGGGA 4245 0.0 34.240284 4 >>END_MODULE