##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933736.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1575964 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.62224771631839 34.0 31.0 34.0 31.0 34.0 2 32.81854344388577 34.0 31.0 34.0 31.0 34.0 3 32.84243104537921 34.0 31.0 34.0 31.0 34.0 4 36.302815927267375 37.0 37.0 37.0 35.0 37.0 5 36.31690063986233 37.0 37.0 37.0 35.0 37.0 6 36.299028404202126 37.0 37.0 37.0 35.0 37.0 7 36.38205250881365 37.0 37.0 37.0 35.0 37.0 8 36.31647994497336 37.0 37.0 37.0 35.0 37.0 9 38.16987761141752 39.0 39.0 39.0 37.0 39.0 10 37.67244556347734 39.0 38.0 39.0 35.0 39.0 11 37.53346015518121 39.0 37.0 39.0 35.0 39.0 12 37.605753050196576 39.0 37.0 39.0 35.0 39.0 13 37.64707886728377 39.0 37.0 39.0 35.0 39.0 14 39.05953943110376 40.0 39.0 41.0 35.0 41.0 15 39.092841587752005 40.0 39.0 41.0 35.0 41.0 16 39.08669360467625 40.0 39.0 41.0 35.0 41.0 17 39.005610534250785 40.0 38.0 41.0 35.0 41.0 18 38.48132508102977 39.0 38.0 41.0 35.0 41.0 19 37.944473985446365 38.0 37.0 41.0 35.0 41.0 20 37.354196542560615 38.0 35.0 41.0 34.0 41.0 21 37.273214362764634 38.0 35.0 41.0 34.0 41.0 22 37.2666977164453 38.0 35.0 41.0 34.0 41.0 23 37.16178351789762 38.0 35.0 40.0 34.0 41.0 24 37.064833333756354 38.0 35.0 40.0 34.0 41.0 25 37.00261681104391 38.0 35.0 40.0 33.0 41.0 26 36.959756060417625 38.0 35.0 40.0 33.0 41.0 27 36.892006416390224 38.0 35.0 40.0 33.0 41.0 28 36.74166605328548 38.0 35.0 40.0 33.0 41.0 29 36.59224449289451 38.0 35.0 40.0 33.0 41.0 30 36.33828120439299 38.0 35.0 40.0 33.0 41.0 31 35.857500552043064 38.0 35.0 40.0 31.0 41.0 32 35.04281696790028 38.0 35.0 40.0 23.0 41.0 33 33.997499308359835 38.0 34.0 40.0 16.0 41.0 34 33.076707335954374 38.0 33.0 41.0 10.0 41.0 35 32.454632846943205 38.0 31.0 41.0 8.0 41.0 36 32.133404062529344 38.0 31.0 40.0 7.0 41.0 37 31.904018112088856 38.0 30.0 40.0 7.0 41.0 38 31.723399138559003 38.0 29.0 40.0 7.0 41.0 39 31.591051572244037 37.0 27.0 40.0 7.0 41.0 40 31.425188646441164 37.0 26.0 40.0 7.0 41.0 41 31.27871448840202 37.0 25.0 40.0 7.0 41.0 42 31.1223238601897 37.0 24.0 40.0 7.0 41.0 43 30.944458122139846 37.0 23.0 40.0 7.0 41.0 44 30.768899543390585 37.0 23.0 40.0 7.0 41.0 45 30.741817706495834 36.0 23.0 40.0 7.0 41.0 46 30.619292699579432 36.0 23.0 40.0 7.0 41.0 47 30.53659982080809 36.0 23.0 40.0 7.0 41.0 48 30.445442916208744 36.0 23.0 40.0 7.0 41.0 49 30.39339858017061 36.0 23.0 40.0 7.0 41.0 50 30.291884205476777 35.0 23.0 40.0 7.0 41.0 51 29.547636240421735 35.0 20.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 2.0 10 1.0 11 5.0 12 9.0 13 13.0 14 14.0 15 38.0 16 90.0 17 217.0 18 551.0 19 1110.0 20 2097.0 21 3508.0 22 5881.0 23 10251.0 24 21022.0 25 45467.0 26 75954.0 27 84223.0 28 70267.0 29 53714.0 30 43310.0 31 39134.0 32 38776.0 33 43996.0 34 62920.0 35 83401.0 36 107732.0 37 138135.0 38 268961.0 39 375024.0 40 138.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.125667845204585 3.333578685807544 38.35753862397872 40.183214845009154 2 44.19555269028988 3.2066722336297024 39.53960877278922 13.058166303291191 3 15.105801909180666 3.6377099984517414 67.90783292004133 13.348655172326271 4 12.621037028764617 3.6594110017741523 67.62806764621527 16.091484323245965 5 12.668246228974771 4.183534649268638 67.0260234370836 16.122195684673 6 15.320400719813396 4.885010063681658 67.63549167366767 12.159097542837273 7 61.90154089814235 1.2391780522905345 34.48118104220655 2.3781000073605743 8 64.23116264077098 1.4264919757050287 32.599158356409156 1.7431870271148324 9 59.98411131218734 3.9934287839062312 33.67062953214667 2.3518303717597613 10 23.749210007335193 27.81884611577422 38.77157092420893 9.66037295268166 11 17.40515646296489 20.358840684178066 49.390722123094186 12.845280729762862 12 15.298636263264898 19.90229472246828 50.850336682817634 13.948732331449195 13 15.505557233540868 19.4319794106972 51.932785266668525 13.129678089093405 14 15.536966580454884 20.214928767408395 50.849702150556745 13.398402501579984 15 14.463909074065143 19.744867268541665 51.521798721290594 14.2694249361026 16 16.290156374130373 20.08218461843037 50.41301704861279 13.214641958826471 17 16.311857377452785 19.57119578873629 50.262125276973336 13.854821556837592 18 17.335992446527968 17.95358269605143 50.524948539433645 14.185476317986959 19 16.39904211009896 20.10344144917016 49.15385123010424 14.343665210626638 20 18.11316755966507 20.9399453287004 48.20770017589234 12.739186935742186 21 17.929280110459374 21.027447327477024 48.16436162247361 12.878910939589991 22 17.727625757948786 18.771304420659355 48.800289854336775 14.700779967055086 23 15.451431631687019 21.53602493457972 48.34164993616605 14.670893497567203 24 14.386242325332304 21.801069059953146 49.47359203636631 14.339096578348236 25 14.954148698828146 23.194755717770203 47.97558827485907 13.87550730854258 26 15.713620361886438 22.564221010124598 47.553878134272104 14.168280493716862 27 14.89221835016536 21.969854641349677 48.61132614704397 14.526600861440997 28 13.828044295428068 22.37887413671886 48.7886779139625 15.004403653890572 29 15.144635283547087 20.746349535903104 48.66367505856733 15.44534012198248 30 16.41573030856035 20.433969303867347 48.829097618981145 14.32120276859116 31 16.668083788715986 22.215735892444243 46.5218114119358 14.594368906903965 32 16.404752900446965 22.513521882479548 45.85866174608049 15.223063470992992 33 17.002482290204597 23.823640641537498 42.910624861989234 16.26325220626867 34 17.247284836455655 25.346454614445506 41.361795066384765 16.04446548271407 35 17.3816153160859 26.861019667961962 39.50344043391854 16.253924582033598 36 18.75106284153699 27.809455038313057 37.44552540540266 15.99395671474729 37 18.963504242482696 27.774365404285884 36.72621963445866 16.535910718772765 38 19.458312499524098 28.450459528263334 36.1635798787282 15.92764809348437 39 20.117020439553187 27.619031906820208 35.19839285668962 17.065554796936986 40 20.920845907647635 27.845115751375033 35.14198293869657 16.092055402280764 41 19.80406912848263 27.5027855966253 35.1498511387316 17.54329413616047 42 20.481305410529682 27.422834531753264 35.037475475328115 17.05838458238894 43 19.733064968489128 26.87618498899721 35.658682558738654 17.732067483775012 44 19.726148566845435 27.69390671360513 34.74743077887566 17.83251394067377 45 20.01118045843687 26.927011023094437 34.793941993598835 18.26786652486986 46 19.63636225192961 27.247132548713044 34.77833249998096 18.338172699376383 47 18.65359868626441 28.138777281714557 35.53006286945641 17.67756116256463 48 19.223281750090738 27.48470142718996 35.656588602277715 17.635428220441586 49 19.79302826714316 26.711841133426905 35.3061998878147 18.18893071161524 50 18.83164843866992 26.943826128008002 35.213177458368335 19.011347974953743 51 18.55873611326147 25.99145665763939 34.826239685678104 20.623567543421043 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 611.0 1 1927.0 2 3243.0 3 62728.0 4 122213.0 5 82134.5 6 42056.0 7 41305.0 8 40554.0 9 40672.0 10 40790.0 11 40233.0 12 39676.0 13 38406.5 14 37137.0 15 35244.0 16 33351.0 17 31586.5 18 29822.0 19 28081.0 20 26340.0 21 24913.0 22 23486.0 23 22734.0 24 21982.0 25 21978.5 26 22375.0 27 22775.0 28 24364.0 29 25953.0 30 28403.5 31 30854.0 32 35158.0 33 39462.0 34 44104.5 35 48747.0 36 52959.5 37 57172.0 38 59964.0 39 62756.0 40 67410.0 41 72064.0 42 76463.5 43 80863.0 44 83721.0 45 86579.0 46 90876.0 47 95173.0 48 96972.0 49 98771.0 50 95339.5 51 91908.0 52 84474.0 53 77040.0 54 69323.0 55 61606.0 56 52561.5 57 43517.0 58 38055.5 59 32594.0 60 27742.5 61 22891.0 62 18958.0 63 15025.0 64 12235.0 65 9445.0 66 7413.0 67 5381.0 68 4236.0 69 3091.0 70 2501.0 71 1911.0 72 1963.5 73 2016.0 74 2114.0 75 1927.5 76 1643.0 77 1171.5 78 700.0 79 518.5 80 337.0 81 240.0 82 143.0 83 97.5 84 52.0 85 40.0 86 28.0 87 21.0 88 14.0 89 8.5 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1575964.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.796914274171876 #Duplication Level Percentage of deduplicated Percentage of total 1 76.12842591551754 29.535480140719788 2 7.895570009713982 6.126475056251915 3 3.5729996736356893 4.158640861190639 4 2.2164983346848315 3.4397318351844857 5 1.6145070719679866 3.1318946233093117 6 1.2441007297428022 2.896036161615971 7 0.9956011764315287 2.7038377445295083 8 0.8190328473451205 2.5420757732943637 9 0.6879509312361712 2.4021335973605806 >10 4.679618457004541 30.725673038975565 >50 0.0924502174485693 2.466938551075209 >100 0.04898508908776238 3.5962013446816843 >500 0.0026212591898068798 0.7038051955751218 >1k 0.0014744582942663698 0.8681090365000464 >5k 0.0 0.0 >10k+ 1.6382869936292999E-4 4.702967039735792 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 73992 4.695031104771428 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCC 2857 0.18128586693604676 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1703 0.10806084402943214 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGC 1611 0.10222314722925144 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2690645217784162E-4 0.0 0.0 0.06167653575843103 0.0 2 1.2690645217784162E-4 0.0 0.0 0.18953478632760648 0.0 3 1.2690645217784162E-4 0.0 0.0 0.3121898723574904 0.0 4 1.2690645217784162E-4 0.0 0.0 0.4585764649446307 0.0 5 1.2690645217784162E-4 0.0 0.0 0.7750811566761677 0.0 6 1.2690645217784162E-4 0.0 0.0 1.308532428405725 0.0 7 1.2690645217784162E-4 0.0 0.0 1.7855103289161427 0.0 8 1.2690645217784162E-4 0.0 0.0 2.4347002850318917 0.0 9 1.2690645217784162E-4 0.0 0.0 2.8691645240627324 0.0 10 1.9035967826676244E-4 0.0 0.0 3.459469886367963 0.0 11 1.9035967826676244E-4 0.0 0.0 4.367295192022153 0.0 12 1.9035967826676244E-4 0.0 0.0 5.090598516209761 0.0 13 1.9035967826676244E-4 0.0 0.0 5.405453424062986 0.0 14 1.9035967826676244E-4 0.0 0.0 5.556725915058974 0.0 15 1.9035967826676244E-4 0.0 0.0 5.702795241515669 0.0 16 1.9035967826676244E-4 0.0 0.0 5.971963826584871 0.0 17 1.9035967826676244E-4 0.0 0.0 6.345005342761636 0.0 18 2.5381290435568324E-4 0.0 0.0 6.722552037990716 0.0 19 2.5381290435568324E-4 0.0 0.0 6.964435735841682 0.0 20 2.5381290435568324E-4 0.0 0.0 7.213235835336341 0.0 21 2.5381290435568324E-4 0.0 0.0 7.4751707526314055 0.0 22 2.5381290435568324E-4 0.0 0.0 7.739389986065672 0.0 23 3.172661304446041E-4 0.0 0.0 7.982733108116683 0.0 24 3.172661304446041E-4 0.0 0.0 8.16160775246135 0.0 25 3.172661304446041E-4 0.0 0.0 8.316433624118318 0.0 26 3.172661304446041E-4 0.0 0.0 8.4574266924879 0.0 27 3.807193565335249E-4 0.0 0.0 8.609206809292598 0.0 28 3.807193565335249E-4 0.0 0.0 8.761240739001652 0.0 29 4.441725826224457E-4 0.0 0.0 8.93357970105916 0.0 30 4.441725826224457E-4 0.0 0.0 9.143736785865666 0.0 31 4.441725826224457E-4 0.0 0.0 9.319502222131977 0.0 32 4.441725826224457E-4 0.0 0.0 9.513224921381452 0.0 33 4.441725826224457E-4 0.0 0.0 9.686959854412917 0.0 34 5.076258087113665E-4 0.0 0.0 9.844323855113442 0.0 35 5.076258087113665E-4 0.0 0.0 10.029924541423535 0.0 36 5.076258087113665E-4 0.0 0.0 10.194585663124284 0.0 37 5.076258087113665E-4 0.0 0.0 10.364132683233882 0.0 38 5.076258087113665E-4 0.0 0.0 10.568071351883672 0.0 39 5.076258087113665E-4 0.0 0.0 10.814777494917397 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGTT 20 7.034085E-4 45.0 16 GTTAGCG 20 7.034085E-4 45.0 1 CGGTGCG 20 7.034085E-4 45.0 1 CGTTTTT 46780 0.0 44.355495 1 AGCTACG 185 0.0 41.351353 9 GTTTTTT 52585 0.0 40.03233 2 GCGATGC 410 0.0 39.512196 9 GCTATCG 40 3.4593177E-7 39.375 1 GGACCGT 40 3.4593177E-7 39.375 8 TTAGCGG 195 0.0 39.23077 2 TACGGGA 300 0.0 39.0 4 TACGCGG 35 6.2497656E-6 38.571426 2 CCTATGC 170 0.0 38.38235 35 CTTTGCG 435 0.0 37.75862 1 GCTAGCG 30 1.14011425E-4 37.499996 1 CTAGCGA 30 1.14011425E-4 37.499996 28 TGGGCGA 2485 0.0 36.94165 6 TCGCTCG 55 2.750312E-9 36.81818 1 GGGACCG 810 0.0 36.666668 7 TTGGGCG 1950 0.0 36.576927 5 >>END_MODULE