##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933735.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1586699 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.546234667066656 34.0 31.0 34.0 31.0 34.0 2 32.764910673038806 34.0 31.0 34.0 31.0 34.0 3 32.796562549040495 34.0 31.0 34.0 31.0 34.0 4 36.23304798200541 37.0 37.0 37.0 35.0 37.0 5 36.289223097764605 37.0 37.0 37.0 35.0 37.0 6 36.2909228530427 37.0 37.0 37.0 35.0 37.0 7 36.31145667829878 37.0 37.0 37.0 35.0 37.0 8 36.27697565826915 37.0 37.0 37.0 35.0 37.0 9 38.14368761813047 39.0 39.0 39.0 37.0 39.0 10 37.68115691760063 39.0 38.0 39.0 35.0 39.0 11 37.54387000937166 39.0 37.0 39.0 35.0 39.0 12 37.59123375006854 39.0 37.0 39.0 35.0 39.0 13 37.64274005340648 39.0 37.0 39.0 35.0 39.0 14 39.0726949471828 40.0 39.0 41.0 35.0 41.0 15 39.0986242507243 40.0 39.0 41.0 35.0 41.0 16 39.144685917114714 41.0 39.0 41.0 35.0 41.0 17 39.082252525526265 40.0 39.0 41.0 35.0 41.0 18 38.594893549438176 39.0 38.0 41.0 35.0 41.0 19 38.0905641208572 39.0 37.0 41.0 35.0 41.0 20 37.46044965050082 39.0 35.0 41.0 34.0 41.0 21 37.40542724234401 38.0 35.0 41.0 34.0 41.0 22 37.388008059499626 38.0 35.0 41.0 34.0 41.0 23 37.22925835334868 38.0 35.0 41.0 34.0 41.0 24 37.14347774845765 38.0 35.0 41.0 34.0 41.0 25 37.089790187048706 38.0 35.0 41.0 34.0 41.0 26 37.076787720922496 38.0 35.0 41.0 34.0 41.0 27 37.006430961385874 38.0 35.0 41.0 34.0 41.0 28 36.911357478639616 38.0 35.0 41.0 33.0 41.0 29 36.71226489712289 38.0 35.0 41.0 33.0 41.0 30 36.375086263998405 38.0 35.0 41.0 33.0 41.0 31 35.89891088353872 38.0 35.0 41.0 31.0 41.0 32 35.16626846049566 38.0 35.0 41.0 23.0 41.0 33 34.079615604471925 38.0 34.0 41.0 16.0 41.0 34 33.18565588054193 38.0 33.0 41.0 12.0 41.0 35 32.61111590793213 38.0 32.0 41.0 8.0 41.0 36 32.27759329274172 38.0 31.0 41.0 8.0 41.0 37 32.06830280979568 38.0 30.0 41.0 7.0 41.0 38 31.883009316826946 38.0 30.0 41.0 7.0 41.0 39 31.781215592875522 38.0 29.0 41.0 7.0 41.0 40 31.61703511504072 38.0 27.0 41.0 7.0 41.0 41 31.467499506837783 37.0 26.0 40.0 7.0 41.0 42 31.25787625756366 37.0 24.0 40.0 7.0 41.0 43 31.122518511702598 37.0 24.0 40.0 7.0 41.0 44 30.94871175944524 37.0 23.0 40.0 7.0 41.0 45 30.90095853088708 37.0 23.0 40.0 7.0 41.0 46 30.758375091936152 36.0 23.0 40.0 7.0 41.0 47 30.72955299020167 36.0 23.0 40.0 7.0 41.0 48 30.6051614074251 36.0 23.0 40.0 7.0 41.0 49 30.541219853292905 36.0 23.0 40.0 7.0 41.0 50 30.389341015529727 36.0 23.0 40.0 7.0 41.0 51 29.73396907668058 35.0 22.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 4.0 10 9.0 11 2.0 12 15.0 13 15.0 14 15.0 15 41.0 16 96.0 17 228.0 18 506.0 19 1090.0 20 2028.0 21 3495.0 22 5481.0 23 10091.0 24 20652.0 25 45220.0 26 75347.0 27 82881.0 28 69987.0 29 53777.0 30 43277.0 31 38955.0 32 38509.0 33 43234.0 34 62312.0 35 82885.0 36 106260.0 37 133540.0 38 263894.0 39 402626.0 40 224.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.235846874548987 3.4719880708313298 38.359197302071784 39.932967752547896 2 44.11025657670422 3.2453540337518327 39.54858482925873 13.09580456028522 3 15.30006636419384 3.7385162529250984 67.57015665857229 13.39126072430877 4 12.846860053482104 3.7242098217746404 67.33249343448253 16.096436690260724 5 12.752387188748465 4.219892997978823 66.87645230758953 16.15126750568318 6 15.38174537199557 4.894753195155477 67.49093558387571 12.232565848973245 7 61.999408835576254 1.2903518562751979 34.24663404968428 2.4636052584642707 8 64.38650304815216 1.4586257380889507 32.380558631473264 1.7743125822856132 9 60.17398384948878 4.021304607868284 33.422155052722665 2.3825564899202685 10 23.795943654089402 27.923065433330457 38.588478344033746 9.692512568546398 11 17.571952840456824 20.395802858639225 49.18475400816412 12.847490292739833 12 15.335863954032869 20.000453772265566 50.6889460445869 13.97473622911466 13 15.574976728415407 19.496451437859356 51.74812614112696 13.18044569259828 14 15.60415680604828 20.347400483645607 50.616405506022254 13.432037204283862 15 14.495691999553792 19.843587221016715 51.39834335308713 14.262377426342363 16 16.391955878210045 20.16702600808345 50.141457201397365 13.299560912309142 17 16.490714369896246 19.601953489603257 50.121352569075796 13.7859795714247 18 17.487311708143764 18.016649660710694 50.322146796588385 14.173891834557153 19 16.389687016882217 20.172004898219512 48.993728489146335 14.444579595751936 20 18.181646298384255 20.99263943570898 48.07654129737272 12.749172968534046 21 18.038455939028132 21.07904523794368 48.00784521828022 12.874653604747971 22 17.818691509857885 18.837347222125935 48.686675922780566 14.657285345235612 23 15.557960268456714 21.648466407302205 48.158409376951774 14.635163947289309 24 14.423088437063361 21.89299923930122 49.32630574545014 14.357606578185274 25 14.994715443823939 23.29616392270998 47.87782685941064 13.831293774055444 26 15.72799882019211 22.69258378558252 47.36128276377561 14.218134630449757 27 14.971900782694133 22.111944357436414 48.4369121049424 14.479242754927052 28 13.900746140257226 22.451580293426794 48.66411335735385 14.98356020896213 29 15.184732580029356 20.907115968435097 48.5263430556142 15.381808395921343 30 16.518129777607474 20.546682136939644 48.63241232269006 14.302775762762817 31 16.765435662340494 22.29534398143567 46.27903591040267 14.660184445821168 32 16.439286846465524 22.660504607364093 45.649426891930986 15.250781654239399 33 17.08673163593095 23.858400364530386 42.78435922629308 16.270508773245588 34 17.341222248202083 25.390133856515952 41.24361331292199 16.02503058235998 35 17.430401103170798 26.909514659050014 39.369344784360486 16.290739453418702 36 18.784659220179755 27.755232718997114 37.43337583246728 16.02673222835585 37 18.922051378364767 27.849264416250342 36.78088912894002 16.44779507644487 38 19.554370425644688 28.411437834144976 36.119516051878776 15.914675688331561 39 20.1179933938321 27.704309386972575 35.18178306030318 16.995914158892138 40 20.90724201628664 27.932203902567533 35.16155238013007 15.999001701015755 41 19.81925998566836 27.626411814717223 35.10943159351584 17.444896606098574 42 20.540190672585034 27.496015312293004 34.97166129177619 16.99213272334576 43 19.779239792802542 26.941593837268442 35.592383936713894 17.68678243321512 44 19.79896628156947 27.784223724852662 34.73620390508849 17.680606088489373 45 20.00158820292948 27.04911265463708 34.67116321369082 18.27813592874263 46 19.641973682469075 27.43841144413654 34.748304498836895 18.171310374557493 47 18.689240996559526 28.252239397642526 35.53396075752238 17.52455884827557 48 19.251036270899522 27.643617346453237 35.53862452802958 17.56672185461767 49 19.813209688794156 26.853297317260548 35.26295787669873 18.07053511724656 50 18.85764092622482 27.04848241537935 35.226845167230834 18.86703149116499 51 18.5858817582919 26.091716198220333 34.85027721073751 20.472124832750257 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 658.0 1 1947.0 2 3236.0 3 62708.0 4 122180.0 5 82723.5 6 43267.0 7 42009.0 8 40751.0 9 40682.5 10 40614.0 11 40162.5 12 39711.0 13 38290.5 14 36870.0 15 35028.5 16 33187.0 17 31364.5 18 29542.0 19 27770.0 20 25998.0 21 24815.5 22 23633.0 23 22806.0 24 21979.0 25 22008.0 26 22452.0 27 22867.0 28 24560.0 29 26253.0 30 28911.5 31 31570.0 32 35797.5 33 40025.0 34 44548.0 35 49071.0 36 53439.5 37 57808.0 38 60616.0 39 63424.0 40 68158.5 41 72893.0 42 77552.5 43 82212.0 44 84826.0 45 87440.0 46 91589.5 47 95739.0 48 97282.0 49 98825.0 50 96136.5 51 93448.0 52 85505.0 53 77562.0 54 69723.0 55 61884.0 56 52981.5 57 44079.0 58 38191.0 59 32303.0 60 27617.0 61 22931.0 62 19175.5 63 15420.0 64 12480.0 65 9540.0 66 7514.5 67 5489.0 68 4354.5 69 3220.0 70 2608.5 71 1997.0 72 1980.0 73 1963.0 74 2067.0 75 1885.0 76 1599.0 77 1177.0 78 755.0 79 540.5 80 326.0 81 236.5 82 147.0 83 92.5 84 38.0 85 30.0 86 22.0 87 17.0 88 12.0 89 7.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1586699.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.51883307411358 #Duplication Level Percentage of deduplicated Percentage of total 1 75.68616807260679 29.15342874008045 2 8.00450161707809 6.166481232594063 3 3.719555067236551 4.29818762234574 4 2.3236823863683966 3.5802213583112863 5 1.6130446178658535 3.106629818833607 6 1.2614735204765328 2.915429277758998 7 0.986084321977058 2.658797217666433 8 0.8130974602341715 2.5055652274996603 9 0.6988989053502078 2.4228693243778827 >10 4.7523175491944265 31.032111487063652 >50 0.08626868386137704 2.290019096699901 >100 0.05095050415678035 3.7208389534789146 >500 0.002308421263126309 0.6341101784987011 >1k 0.001483985097724056 0.8748230767869701 >5k 0.0 0.0 >10k+ 1.6488723308045067E-4 4.640487388003716 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 73064 4.604780112674175 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGCC 2847 0.17942911667556355 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1753 0.1104809418799659 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGAGAGGTCGTATGC 1651 0.1040525014511259 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.151196288647059E-4 0.0 0.0 0.05955760985542942 0.0 2 3.151196288647059E-4 0.0 0.0 0.18604662888172238 0.0 3 3.151196288647059E-4 0.0 0.0 0.3047206811121706 0.0 4 3.151196288647059E-4 0.0 0.0 0.448982447206433 0.0 5 3.151196288647059E-4 0.0 0.0 0.7678204876917424 0.0 6 3.151196288647059E-4 0.0 0.0 1.2710035110629048 0.0 7 3.151196288647059E-4 0.0 0.0 1.7221287717456177 0.0 8 3.7814355463764706E-4 0.0 0.0 2.357094823908 0.0 9 3.7814355463764706E-4 0.0 0.0 2.7806786290279377 0.0 10 3.7814355463764706E-4 0.0 0.0 3.3636499424276436 0.0 11 3.7814355463764706E-4 0.0 0.0 4.233947333426189 0.0 12 3.7814355463764706E-4 0.0 0.0 4.955508259600593 0.0 13 4.411674804105883E-4 0.0 0.0 5.260733132118946 0.0 14 4.411674804105883E-4 0.0 0.0 5.406381424580213 0.0 15 4.411674804105883E-4 0.0 0.0 5.554298578369306 0.0 16 4.411674804105883E-4 0.0 0.0 5.810679908413631 0.0 17 4.411674804105883E-4 0.0 0.0 6.170924668131763 0.0 18 4.411674804105883E-4 0.0 0.0 6.544908643668395 0.0 19 5.041914061835295E-4 0.0 0.0 6.78370629842207 0.0 20 5.041914061835295E-4 0.0 0.0 7.016831799856179 0.0 21 5.041914061835295E-4 0.0 0.0 7.273591273455142 0.0 22 5.041914061835295E-4 0.0 0.0 7.529783531722147 0.0 23 5.672153319564706E-4 0.0 0.0 7.7565436166531905 0.0 24 5.672153319564706E-4 0.0 0.0 7.927149383720542 0.0 25 5.672153319564706E-4 0.0 0.0 8.077272374911688 0.0 26 5.672153319564706E-4 0.0 0.0 8.213278006729695 0.0 27 5.672153319564706E-4 0.0 0.0 8.361069112667241 0.0 28 5.672153319564706E-4 0.0 0.0 8.515666802588267 0.0 29 5.672153319564706E-4 0.0 0.0 8.678772722488638 0.0 30 5.672153319564706E-4 0.0 0.0 8.887823084277484 0.0 31 5.672153319564706E-4 0.0 0.0 9.051559243435586 0.0 32 5.672153319564706E-4 0.0 0.0 9.243404073488419 0.0 33 5.672153319564706E-4 0.0 0.0 9.408274663310433 0.0 34 5.672153319564706E-4 0.0 0.0 9.563565616414959 0.0 35 5.672153319564706E-4 0.0 0.0 9.751376915218325 0.0 36 6.302392577294118E-4 0.0 0.0 9.917760079258889 0.0 37 6.302392577294118E-4 0.0 0.0 10.096117789196313 0.0 38 6.302392577294118E-4 0.0 0.0 10.291744054795522 0.0 39 6.302392577294118E-4 0.0 0.0 10.526571202225501 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCACT 20 7.034098E-4 45.000004 18 CGTTTTT 45800 0.0 44.400654 1 GTTTTTT 51885 0.0 39.88725 2 TACGGGA 250 0.0 39.6 4 TTACGCG 40 3.4593359E-7 39.375004 1 CGAATAT 150 0.0 39.000004 14 AGCTACG 150 0.0 39.000004 9 TCTCGCG 60 1.5643309E-10 37.499996 1 AGTCGAC 30 1.140118E-4 37.499996 23 AGACACG 840 0.0 37.232143 24 GTTTGCG 285 0.0 37.10526 1 TTTTGCG 1160 0.0 36.853447 1 CTCGTTG 165 0.0 36.81818 1 TGGGCGA 2645 0.0 36.748585 6 CTTTGCG 430 0.0 36.627907 1 GACACGA 840 0.0 36.428574 25 CACGACC 840 0.0 36.428574 27 TTGGGAC 3710 0.0 36.32749 5 TTGGGCG 2005 0.0 36.246883 5 ACACGAC 845 0.0 36.21302 26 >>END_MODULE