SRR2933734.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933734.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	183328
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9392	5.123058125327282	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCC	1282	0.6992930703438646	No Hit
CTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGCT	891	0.4860141385931227	No Hit
CCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	710	0.38728399371618083	No Hit
TCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	680	0.370919881305638	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGC	676	0.36873799965089893	No Hit
GCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	652	0.35564670972246465	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	334	0.18218711817071043	No Hit
TCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG	329	0.17945976610228662	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	269	0.14673154128120092	No Hit
GCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG	252	0.13745854424855997	No Hit
CGTTTTTTTCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCG	252	0.13745854424855997	No Hit
TTCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCT	210	0.11454878687379996	No Hit
TGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG	195	0.10636673066852853	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGTAT	20	7.017761E-4	45.000004	6
ATGGGAT	20	7.017761E-4	45.000004	5
TTGGCGA	20	7.017761E-4	45.000004	5
CCTAGCA	20	7.017761E-4	45.000004	45
ACCATAG	20	7.017761E-4	45.000004	23
GCGCGAC	20	7.017761E-4	45.000004	9
CGACCTC	20	7.017761E-4	45.000004	12
GATTTCA	20	7.017761E-4	45.000004	9
TAACGTC	20	7.017761E-4	45.000004	32
TACGGGG	20	7.017761E-4	45.000004	4
CGCGACC	20	7.017761E-4	45.000004	10
AGCGCTT	20	7.017761E-4	45.000004	37
GCCTAGC	20	7.017761E-4	45.000004	44
TATAGGG	20	7.017761E-4	45.000004	3
CGATGTT	20	7.017761E-4	45.000004	10
TTGCCTA	20	7.017761E-4	45.000004	42
TGGGCGC	40	6.7611836E-9	45.000004	6
GGCGCGA	20	7.017761E-4	45.000004	8
TGTACGG	20	7.017761E-4	45.000004	2
AGGGCGA	20	7.017761E-4	45.000004	6