##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933734.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 183328 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.004009207540584 33.0 31.0 34.0 30.0 34.0 2 32.19905851806598 34.0 31.0 34.0 30.0 34.0 3 32.325242188863676 34.0 31.0 34.0 30.0 34.0 4 35.90526815325537 37.0 35.0 37.0 35.0 37.0 5 35.93782182754408 37.0 35.0 37.0 35.0 37.0 6 35.89886978530284 37.0 35.0 37.0 35.0 37.0 7 35.975606563100015 37.0 35.0 37.0 35.0 37.0 8 35.77244065281899 37.0 35.0 37.0 35.0 37.0 9 37.5786950165823 39.0 37.0 39.0 35.0 39.0 10 37.0567561965439 39.0 37.0 39.0 33.0 39.0 11 37.14763156746378 39.0 37.0 39.0 34.0 39.0 12 37.181576191307386 39.0 37.0 39.0 34.0 39.0 13 37.127601893873276 39.0 37.0 39.0 33.0 39.0 14 38.18737454180485 40.0 37.0 41.0 33.0 41.0 15 38.227924812358175 40.0 37.0 41.0 33.0 41.0 16 38.28847748298132 40.0 38.0 41.0 33.0 41.0 17 38.25770204224123 40.0 38.0 41.0 33.0 41.0 18 38.01352221155525 39.0 37.0 40.0 34.0 41.0 19 37.71866817943795 39.0 37.0 40.0 34.0 41.0 20 37.317992887065806 39.0 35.0 40.0 33.0 41.0 21 37.17465417175772 39.0 35.0 40.0 33.0 41.0 22 37.22151008029324 39.0 35.0 40.0 33.0 41.0 23 37.15512087624367 39.0 35.0 40.0 33.0 41.0 24 37.06645466049921 38.0 35.0 40.0 33.0 41.0 25 36.98273040670274 38.0 35.0 40.0 33.0 41.0 26 36.930201605864895 38.0 35.0 40.0 33.0 41.0 27 36.84598097399197 38.0 35.0 40.0 33.0 41.0 28 36.703433190783734 38.0 35.0 40.0 32.0 41.0 29 36.634278451736776 38.0 35.0 40.0 32.0 41.0 30 36.45564780066329 38.0 35.0 40.0 31.0 41.0 31 36.16658666433933 38.0 35.0 40.0 31.0 41.0 32 35.76638593122709 38.0 35.0 40.0 30.0 41.0 33 35.324413073834876 38.0 35.0 40.0 25.0 41.0 34 35.011514880432884 38.0 35.0 40.0 23.0 41.0 35 34.673857784953746 38.0 35.0 40.0 21.0 41.0 36 34.37237083260604 38.0 34.0 40.0 20.0 41.0 37 34.20209133356607 38.0 34.0 40.0 18.0 41.0 38 34.07411306510735 38.0 33.0 40.0 18.0 41.0 39 33.946314801885144 38.0 33.0 40.0 18.0 41.0 40 33.75267280502705 38.0 33.0 40.0 16.0 41.0 41 33.692507418397625 38.0 33.0 40.0 16.0 41.0 42 33.66379385582126 37.0 33.0 40.0 15.0 41.0 43 33.55309063536394 37.0 33.0 40.0 15.0 41.0 44 33.38163292023041 37.0 33.0 40.0 15.0 41.0 45 33.25106366730669 37.0 33.0 40.0 15.0 41.0 46 32.93711817071042 37.0 32.0 40.0 13.0 41.0 47 32.7586457060569 36.0 31.0 40.0 12.0 41.0 48 32.756005629254666 36.0 31.0 40.0 12.0 41.0 49 32.84702827718625 36.0 32.0 40.0 12.0 41.0 50 32.78252094606388 36.0 32.0 40.0 12.0 41.0 51 31.75314736428696 35.0 30.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 2.0 13 1.0 14 4.0 15 11.0 16 11.0 17 23.0 18 47.0 19 107.0 20 182.0 21 352.0 22 548.0 23 856.0 24 1617.0 25 2713.0 26 4386.0 27 5028.0 28 4679.0 29 4493.0 30 4586.0 31 4998.0 32 5824.0 33 7206.0 34 10590.0 35 15237.0 36 20203.0 37 24332.0 38 37779.0 39 27504.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.08812620003491 4.717773607959504 41.67339413510211 30.520706056903474 2 35.29793593995462 4.91196107523128 40.670274044335834 19.119828940478268 3 18.958915168441266 4.883596613719672 57.566765578635014 18.59072263920405 4 14.303870658055507 5.256698376680049 58.059870832606045 22.379560132658405 5 13.299114156048175 5.889989526968057 58.82025658928259 21.99063972770117 6 16.97776662593821 7.0714784430092505 61.59506458369698 14.35569034735556 7 64.7047914121138 2.3782510036655613 27.640076802234248 5.276880781986385 8 63.29038662942922 3.045361319602025 27.092969977308428 6.571282073660324 9 57.64476784779193 6.0012654913597485 29.65177168790365 6.702194972944668 10 23.761782160935592 27.100061092686335 34.40609181358003 14.732064932798044 11 19.603661197416653 18.365443358352245 40.82846046430441 21.202434979926686 12 16.60848315587363 17.356323093035435 45.57841682667132 20.45677692441962 13 18.786001047303195 18.41671757723861 47.63647669750392 15.160804677954268 14 16.953765927736082 20.014400418921277 45.780240879734684 17.25159277360796 15 12.9331035084657 18.34307907139117 47.57483854075755 21.14897887938558 16 13.34438820038401 19.693118345260956 44.32165299354163 22.640840460813404 17 13.050379647407926 19.29601588409845 43.680725257462036 23.972879211031596 18 15.20007854773957 16.86212689823704 46.7997250829115 21.138069471111887 19 14.642062314540057 19.696936638156746 46.21170797695933 19.449293070343863 20 15.616817943794729 22.470108221330076 43.87982195845697 18.033251876418223 21 14.190412812009075 24.72617385233025 43.80291063012742 17.28050270553325 22 13.007832955140513 21.85209024262524 42.104861232326755 23.03521556990749 23 12.657095479141212 23.3712253447373 40.648455227788446 23.32322394833304 24 13.264749519986035 22.126461860708673 41.34829376854599 23.260494850759294 25 13.628032815500088 24.68417263047652 38.22602112061442 23.461773433408972 26 14.163684761738523 24.434892651422587 40.31626374585443 21.085158840984462 27 15.363174201431315 22.676296037702915 41.82121661721068 20.139313143655087 28 11.818161982894047 21.974275615290626 41.74812358177692 24.4594388200384 29 15.357174026880783 19.76730232152208 39.75224733810438 25.123276313492752 30 19.31838017105952 21.529171757723862 39.357326758596614 19.795121312620005 31 18.41671757723861 26.171124978181183 33.02986995985337 22.382287484726827 32 16.107741316111014 24.725628381916565 32.87331995112585 26.29331035084657 33 16.460660673765055 22.3833784255542 33.766255018327804 27.389705882352942 34 17.29741228835748 21.565172805027053 33.30642345959155 27.830991447023912 35 19.234923197765752 21.79590679001571 32.3633051143306 26.605864897887937 36 19.23001396404259 24.20143131436551 34.86865072438471 21.699903997207194 37 15.80718711817071 23.20976610228661 34.05808168964916 26.924965089893526 38 14.87934194449293 24.237432361668702 30.611799615988826 30.27142607784954 39 17.672695932972594 25.45328591377204 30.295426776051666 26.578591377203704 40 20.114766975039274 27.560983592249954 30.477068423808696 21.847181008902076 41 17.61814889160412 25.085638854948506 30.552888811310876 26.743323442136496 42 19.04891778669925 20.235315936463607 36.19632571129342 24.519440565543725 43 18.02016058648979 18.44835486123233 38.5920317681969 24.93945278408099 44 18.841093559085355 20.079311398149766 33.4978835747949 27.581711467969978 45 21.524262524000697 20.034582824227616 31.16872490836097 27.27242974341072 46 21.302256065631 21.64372054459766 33.910259207540584 23.143764182230754 47 15.248625414557516 24.38361843253622 38.03947023913423 22.328285913772035 48 15.13134927561529 21.84609006807471 39.49423983243149 23.528320823878513 49 20.06622010822133 18.43471810089021 39.171866817943794 22.327194972944667 50 18.8465482632222 17.618694362017802 35.95631872927213 27.578438645487868 51 17.729970326409493 16.4017498690871 33.25896753360097 32.60931227090242 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 511.0 1 712.0 2 913.0 3 7091.0 4 13269.0 5 7979.0 6 2689.0 7 2653.5 8 2618.0 9 2556.0 10 2494.0 11 2413.0 12 2332.0 13 2190.0 14 2048.0 15 1879.5 16 1711.0 17 1640.5 18 1570.0 19 1397.0 20 1224.0 21 1163.0 22 1102.0 23 1053.5 24 1005.0 25 1046.5 26 1146.5 27 1205.0 28 1273.0 29 1341.0 30 1461.5 31 1582.0 32 1703.0 33 1824.0 34 2038.0 35 2252.0 36 2509.5 37 2767.0 38 3121.0 39 3475.0 40 4401.0 41 5327.0 42 6564.5 43 7802.0 44 9410.5 45 11019.0 46 14229.0 47 17439.0 48 21113.0 49 24787.0 50 23876.5 51 22966.0 52 19135.0 53 15304.0 54 12183.0 55 9062.0 56 7348.0 57 5634.0 58 4711.5 59 3789.0 60 3404.0 61 3019.0 62 2741.0 63 2463.0 64 2249.5 65 2036.0 66 1663.5 67 1291.0 68 1030.5 69 770.0 70 669.5 71 569.0 72 485.0 73 401.0 74 350.5 75 245.0 76 190.0 77 138.0 78 86.0 79 60.5 80 35.0 81 23.5 82 12.0 83 8.0 84 4.0 85 3.0 86 2.0 87 1.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 183328.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.49155611799616 #Duplication Level Percentage of deduplicated Percentage of total 1 76.79804211492377 41.08046779542678 2 11.475042063937185 12.276357130389249 3 4.889614031509713 7.846591900855297 4 2.5105797175342883 5.371792633967534 5 1.3480854535257227 3.605559434456275 6 0.7902921531637179 2.5364374236341423 7 0.44766226482435123 1.6762305812532727 8 0.317136593076021 1.3571303892476871 9 0.21516341202263806 1.0358483155873626 >10 1.1033498189976036 10.545034037353814 >50 0.07138122673736806 2.639531331820562 >100 0.026513027073879567 2.2380651073485773 >500 0.005098659052669148 1.9686027229883052 >1k 0.0010197318105338296 0.6992930703438646 >5k 0.0010197318105338296 5.123058125327282 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9392 5.123058125327282 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCC 1282 0.6992930703438646 No Hit CTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGCT 891 0.4860141385931227 No Hit CCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC 710 0.38728399371618083 No Hit TCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC 680 0.370919881305638 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGC 676 0.36873799965089893 No Hit GCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC 652 0.35564670972246465 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 334 0.18218711817071043 No Hit TCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG 329 0.17945976610228662 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 269 0.14673154128120092 No Hit GCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG 252 0.13745854424855997 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCG 252 0.13745854424855997 No Hit TTCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCT 210 0.11454878687379996 No Hit TGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG 195 0.10636673066852853 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5329245941700123 0.0 2 0.0 0.0 0.0 1.817507418397626 0.0 3 0.0 0.0 0.0 2.676623319951126 0.0 4 0.0 0.0 0.0 3.736472333740618 0.0 5 0.0 0.0 0.0 5.880716529935416 0.0 6 0.0 0.0 0.0 7.65895007854774 0.0 7 5.454704136847617E-4 0.0 0.0 9.430637982195845 0.0 8 5.454704136847617E-4 0.0 0.0 12.017258683888986 0.0 9 5.454704136847617E-4 0.0 0.0 13.282750043637632 0.0 10 5.454704136847617E-4 0.0 0.0 16.00628381916565 0.0 11 5.454704136847617E-4 0.0 0.0 21.654629952871357 0.0 12 5.454704136847617E-4 0.0 0.0 26.607501309128992 0.0 13 5.454704136847617E-4 0.0 0.0 28.44464566241927 0.0 14 0.0010909408273695235 0.0 0.0 29.0735730493978 0.002727352068423809 15 0.0010909408273695235 0.0 0.0 30.03796474079246 0.002727352068423809 16 0.0010909408273695235 0.0 0.0 32.14238959678827 0.002727352068423809 17 0.0010909408273695235 0.0 0.0 34.935743585267936 0.002727352068423809 18 0.0010909408273695235 0.0 0.0 37.333086053412465 0.002727352068423809 19 0.0010909408273695235 0.0 0.0 38.68858003141909 0.002727352068423809 20 0.0010909408273695235 0.0 0.0 40.08007505672892 0.002727352068423809 21 0.0010909408273695235 0.0 0.0 41.59648280677256 0.002727352068423809 22 0.0010909408273695235 0.0 0.0 42.88870221679176 0.002727352068423809 23 0.0010909408273695235 0.0 0.0 43.8285477395706 0.002727352068423809 24 0.0010909408273695235 0.0 0.0 44.34674463257113 0.002727352068423809 25 0.0010909408273695235 0.0 0.0 44.74111974166521 0.002727352068423809 26 0.0010909408273695235 0.0 0.0 45.01821871181707 0.002727352068423809 27 0.0010909408273695235 0.0 0.0 45.25168004887415 0.002727352068423809 28 0.0010909408273695235 0.0 0.0 45.46932274393437 0.002727352068423809 29 0.0010909408273695235 0.0 0.0 45.689147320649326 0.002727352068423809 30 0.0010909408273695235 0.0 0.0 45.97006458369698 0.002727352068423809 31 0.0010909408273695235 0.0 0.0 46.14788793855821 0.002727352068423809 32 0.0010909408273695235 0.0 0.0 46.410259207540584 0.002727352068423809 33 0.0010909408273695235 0.0 0.0 46.60117385233025 0.002727352068423809 34 0.0010909408273695235 0.0 0.0 46.764269506021996 0.002727352068423809 35 0.0010909408273695235 0.0 0.0 46.92900157095479 0.002727352068423809 36 0.0010909408273695235 0.0 0.0 47.063187292721246 0.002727352068423809 37 0.0010909408273695235 0.0 0.0 47.20719148193402 0.002727352068423809 38 0.0010909408273695235 0.0 0.0 47.38719671844999 0.002727352068423809 39 0.0010909408273695235 0.0 0.0 47.621203525920755 0.002727352068423809 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 20 7.017761E-4 45.000004 6 ATGGGAT 20 7.017761E-4 45.000004 5 TTGGCGA 20 7.017761E-4 45.000004 5 CCTAGCA 20 7.017761E-4 45.000004 45 ACCATAG 20 7.017761E-4 45.000004 23 GCGCGAC 20 7.017761E-4 45.000004 9 CGACCTC 20 7.017761E-4 45.000004 12 GATTTCA 20 7.017761E-4 45.000004 9 TAACGTC 20 7.017761E-4 45.000004 32 TACGGGG 20 7.017761E-4 45.000004 4 CGCGACC 20 7.017761E-4 45.000004 10 AGCGCTT 20 7.017761E-4 45.000004 37 GCCTAGC 20 7.017761E-4 45.000004 44 TATAGGG 20 7.017761E-4 45.000004 3 CGATGTT 20 7.017761E-4 45.000004 10 TTGCCTA 20 7.017761E-4 45.000004 42 TGGGCGC 40 6.7611836E-9 45.000004 6 GGCGCGA 20 7.017761E-4 45.000004 8 TGTACGG 20 7.017761E-4 45.000004 2 AGGGCGA 20 7.017761E-4 45.000004 6 >>END_MODULE