SRR2933733.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933733.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	184554
Sequences flagged as poor quality	0
Sequence length	51
%GC	41

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9183	4.975779446666016	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCC	1307	0.7081938077744183	No Hit
CTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGCT	892	0.4833273730181952	No Hit
CCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	828	0.4486491758509704	No Hit
TCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	735	0.3982574205923469	No Hit
GCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC	687	0.37224877271692836	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGC	664	0.35978629560995695	No Hit
TCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG	269	0.1457567974684916	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	266	0.14413125697627793	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	258	0.13979648233037487	No Hit
GCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG	238	0.1289595457156171	No Hit
TTCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCT	228	0.12354107740823823	No Hit
CGTTTTTTTCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCG	226	0.12245738374676246	No Hit
CGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG	197	0.10674382565536375	No Hit
TGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG	190	0.10295089784019852	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTGTTG	30	2.1555734E-6	45.000004	1
GTTTCGG	35	1.2045348E-7	45.000004	2
CGCGGGA	70	0.0	45.000004	4
GCTTGCG	35	1.2045348E-7	45.000004	1
ATTGGGA	70	0.0	45.000004	4
GTCCAGG	30	2.1555734E-6	45.000004	2
TGTTTCG	25	3.8780465E-5	45.0	1
ATGGGCG	25	3.8780465E-5	45.0	5
ATGGGCA	20	7.0178864E-4	45.0	5
TCGTTAG	20	7.0178864E-4	45.0	1
GGATGAT	20	7.0178864E-4	45.0	8
CCTAGGG	45	3.8016879E-10	45.0	3
TTGCTCG	20	7.0178864E-4	45.0	1
TGGGTAC	45	3.8016879E-10	45.0	6
GGCCGAT	20	7.0178864E-4	45.0	8
GGATAGT	25	3.8780465E-5	45.0	8
TCGGAAT	20	7.0178864E-4	45.0	5
CGAGGGA	20	7.0178864E-4	45.0	4
CGGGATA	25	3.8780465E-5	45.0	6
GGACGGA	20	7.0178864E-4	45.0	8