##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933733.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 184554 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.927300410719898 33.0 31.0 34.0 30.0 34.0 2 32.133185950995376 34.0 31.0 34.0 30.0 34.0 3 32.25750728783987 33.0 31.0 34.0 30.0 34.0 4 35.80545531389187 37.0 35.0 37.0 35.0 37.0 5 35.896588532353675 37.0 35.0 37.0 35.0 37.0 6 35.88423984308116 37.0 35.0 37.0 35.0 37.0 7 35.87994841618171 37.0 35.0 37.0 35.0 37.0 8 35.737188031687204 37.0 35.0 37.0 35.0 37.0 9 37.54247537306154 39.0 37.0 39.0 35.0 39.0 10 37.0968551209944 39.0 37.0 39.0 33.0 39.0 11 37.1583926655613 39.0 37.0 39.0 34.0 39.0 12 37.15161416170877 39.0 37.0 39.0 34.0 39.0 13 37.117250235703374 39.0 37.0 39.0 33.0 39.0 14 38.23830423615852 40.0 38.0 41.0 33.0 41.0 15 38.24650237870759 40.0 38.0 41.0 33.0 41.0 16 38.377298785179406 40.0 38.0 41.0 34.0 41.0 17 38.37666482438744 40.0 38.0 41.0 34.0 41.0 18 38.18502985576038 39.0 38.0 40.0 34.0 41.0 19 37.924136025228385 39.0 37.0 41.0 34.0 41.0 20 37.49355202271422 39.0 35.0 40.0 34.0 41.0 21 37.384445744876835 39.0 35.0 40.0 33.0 41.0 22 37.385697411055844 39.0 35.0 40.0 33.0 41.0 23 37.286571951840656 39.0 35.0 40.0 33.0 41.0 24 37.19078968757112 39.0 35.0 40.0 33.0 41.0 25 37.11346814482482 39.0 35.0 40.0 33.0 41.0 26 37.11023873771362 39.0 35.0 40.0 33.0 41.0 27 37.04392752256792 38.0 35.0 40.0 33.0 41.0 28 36.98402635542985 38.0 35.0 40.0 33.0 41.0 29 36.82453374080215 38.0 35.0 40.0 33.0 41.0 30 36.54945436024145 38.0 35.0 40.0 32.0 41.0 31 36.27917032413277 38.0 35.0 40.0 31.0 41.0 32 35.99232744887675 38.0 35.0 40.0 30.0 41.0 33 35.48638880761187 38.0 35.0 40.0 26.0 41.0 34 35.15986648894091 38.0 35.0 40.0 24.0 41.0 35 34.89964454847904 38.0 35.0 40.0 22.0 41.0 36 34.59532711293171 38.0 35.0 40.0 21.0 41.0 37 34.451867746025556 38.0 34.0 40.0 20.0 41.0 38 34.31535485548945 38.0 34.0 40.0 18.0 41.0 39 34.23458174843135 38.0 34.0 40.0 18.0 41.0 40 34.07647084322204 38.0 34.0 40.0 18.0 41.0 41 34.01820605351279 38.0 34.0 40.0 18.0 41.0 42 33.883616719225806 38.0 33.0 40.0 16.0 41.0 43 33.75723636442451 38.0 33.0 40.0 15.0 41.0 44 33.60289671315712 38.0 33.0 40.0 15.0 41.0 45 33.45549270132319 37.0 33.0 40.0 15.0 41.0 46 33.14706264833057 37.0 33.0 40.0 13.0 41.0 47 33.08476651820064 37.0 32.0 40.0 13.0 41.0 48 33.03467277869892 37.0 32.0 40.0 13.0 41.0 49 33.101206151045226 37.0 32.0 40.0 13.0 41.0 50 32.93889593289769 36.0 32.0 40.0 12.0 41.0 51 32.073003023505315 35.0 31.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 2.0 10 3.0 11 5.0 12 4.0 13 7.0 14 4.0 15 10.0 16 12.0 17 22.0 18 58.0 19 101.0 20 226.0 21 314.0 22 529.0 23 862.0 24 1545.0 25 2802.0 26 4254.0 27 4863.0 28 4582.0 29 4424.0 30 4450.0 31 4844.0 32 5451.0 33 7050.0 34 10030.0 35 14561.0 36 19534.0 37 23239.0 38 38093.0 39 32655.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.33300822523489 4.958982194913142 41.17548251460278 30.532527065249194 2 35.36742633592336 4.878788863963935 40.653684016602185 19.100100783510516 3 19.149950691938404 4.965484356881997 57.28675617976311 18.597808771416496 4 14.553464026788907 5.36970209261246 57.73377981512186 22.34305406547677 5 13.411792754424178 5.931055409256912 58.718857353403344 21.93829448291557 6 16.957638414772912 7.054845736207289 61.36523727472718 14.622278574292618 7 64.74744519219307 2.4448129002893464 27.61305634123346 5.1946855662841225 8 63.38795149387171 3.045721035577663 26.851761544046727 6.714565926503896 9 57.47098410221398 6.070310044756548 29.712170963512037 6.746534889517432 10 23.790326950377665 27.06091442071155 34.3682607800427 14.780497848868082 11 19.83051031134519 18.298709320849184 40.923523738309655 20.947256629495975 12 16.744692610292923 17.57859488279853 45.17106104446395 20.505651462444597 13 18.919665788874802 18.65090976082881 47.391007509997074 15.038416940299316 14 17.164623904114784 19.909078101802184 45.516217475643984 17.41008051843905 15 13.036834747553561 18.588055528463215 47.341157601569186 21.033952122414036 16 13.463268203344278 19.74814959307303 44.18815089350542 22.60043131007727 17 13.030874432415446 19.651159010370947 43.55689933569579 23.76106722151782 18 15.264908915547753 16.725727971217097 46.72832883600464 21.28103427723051 19 14.669961095397552 19.860311887035774 45.925311832851094 19.544415184715586 20 15.801879124808998 22.345221452799723 43.8402852281717 18.01261419421958 21 14.572970512695472 24.891901557267794 43.44798812271747 17.087139807319268 22 13.2476131647106 21.6326928703794 42.17031329583753 22.949380669072468 23 12.940927858512955 23.575755605405462 40.218039164688925 23.265277371392653 24 13.468686671651659 22.185376637732045 41.32232300573274 23.023613684883557 25 13.69897157471526 24.829047324902195 38.09399958819641 23.377981512186135 26 14.320469889571616 24.143611084018772 40.2976906488074 21.23822837760222 27 15.490859043965452 22.658408920966224 41.671814211558676 20.17891782350965 28 12.063135992717578 21.937210789254095 41.69294623795746 24.306706980070874 29 15.536916024578174 20.001192063027624 39.57378328294158 24.888108629452628 30 19.29462379574542 21.570380484844545 39.430735719626774 19.70425999978326 31 18.55825395277263 26.20262904082274 32.81261852899423 22.426498477410405 32 16.272202173889486 24.791659893581283 32.74976429662863 26.186373635900605 33 16.435839916772327 22.55599986995676 33.69366147577403 27.314498737496884 34 17.39436696034765 21.969721599098367 33.269937254137 27.365974186416985 35 19.113105107448227 21.775198586863464 32.210084853213694 26.901611452474615 36 19.374817126694627 24.131690453742536 34.790359461187506 21.703132958375328 37 15.916750652925431 23.062084809865947 34.32003641210702 26.701128125101597 38 15.039500633960792 24.421578508187306 30.47238206703729 30.06653879081461 39 17.534163442678025 25.472761359818808 30.533610758910672 26.4594644385925 40 20.27645025304247 27.381145897677644 30.500016255404923 21.842387593874964 41 17.456137499051767 25.059874074796536 30.655526295826697 26.828462130324997 42 19.272408075685167 20.26182038861255 35.81607551177433 24.649696023927955 43 18.206053512793 18.61460602316937 38.526393359125244 24.652947104912386 44 18.835679530110426 20.230935119260486 33.56795301104284 27.365432339586242 45 21.454425263066636 20.00986161231943 31.266187674068295 27.26952545054564 46 21.441962785959664 21.674956923176953 34.07728903193645 22.805791258926927 47 15.250279051117829 24.45138008387789 38.128677785363635 22.169663079640646 48 15.226979637396102 22.245521635943952 39.08937221626191 23.438126510398043 49 20.0380376475178 18.57125827671034 39.055777712756154 22.334926363015704 50 19.15862024123021 17.739523391527683 35.920651950106745 27.181204417135362 51 17.71188920316005 16.600019506485904 33.18486730171115 32.503223988642894 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 441.0 1 694.5 2 948.0 3 7051.5 4 13155.0 5 7930.5 6 2706.0 7 2662.0 8 2618.0 9 2580.5 10 2543.0 11 2437.0 12 2331.0 13 2207.5 14 2084.0 15 1918.5 16 1753.0 17 1684.0 18 1615.0 19 1439.5 20 1264.0 21 1166.0 22 1068.0 23 1050.0 24 1032.0 25 1057.0 26 1170.5 27 1259.0 28 1349.5 29 1440.0 30 1473.5 31 1507.0 32 1705.0 33 1903.0 34 2108.0 35 2313.0 36 2565.5 37 2818.0 38 3207.0 39 3596.0 40 4497.0 41 5398.0 42 6676.5 43 7955.0 44 9454.5 45 10954.0 46 14155.0 47 17356.0 48 20935.5 49 24515.0 50 24017.0 51 23519.0 52 19499.0 53 15479.0 54 12286.0 55 9093.0 56 7327.5 57 5562.0 58 4699.5 59 3837.0 60 3446.0 61 3055.0 62 2787.5 63 2520.0 64 2268.5 65 2017.0 66 1684.0 67 1351.0 68 1111.0 69 871.0 70 709.5 71 548.0 72 457.0 73 366.0 74 343.5 75 260.5 76 200.0 77 146.0 78 92.0 79 67.5 80 43.0 81 32.5 82 22.0 83 11.0 84 0.0 85 0.0 86 0.0 87 1.0 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 184554.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.664510116280326 #Duplication Level Percentage of deduplicated Percentage of total 1 76.85985460420032 41.24646444942944 2 11.35702746365105 12.189386304279507 3 4.945476575121163 7.961897330862512 4 2.501009693053312 5.368618398950985 5 1.3428917609046849 3.603281424406948 6 0.7895799676898223 2.5423453298221657 7 0.46445880452342486 1.7447467949759963 8 0.3079563812600969 1.3221062670004442 9 0.21102584814216477 1.0192138886179656 >10 1.1147011308562196 10.37257388081537 >50 0.07269789983844911 2.6740141096914725 >100 0.026252019386106624 2.2091095289183653 >500 0.005048465266558966 2.062269037788398 >1k 0.0010096930533117932 0.7081938077744183 >5k 0.0010096930533117932 4.975779446666016 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9183 4.975779446666016 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCC 1307 0.7081938077744183 No Hit CTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGCT 892 0.4833273730181952 No Hit CCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC 828 0.4486491758509704 No Hit TCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC 735 0.3982574205923469 No Hit GCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTGC 687 0.37224877271692836 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGC 664 0.35978629560995695 No Hit TCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG 269 0.1457567974684916 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 266 0.14413125697627793 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 258 0.13979648233037487 No Hit GCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG 238 0.1289595457156171 No Hit TTCCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCT 228 0.12354107740823823 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCG 226 0.12245738374676246 No Hit CGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG 197 0.10674382565536375 No Hit TGCTGTCTCTTATACACATCTGACGCGTCCAACTTCGTATGCCGTCTTCTG 190 0.10295089784019852 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5152963360317305 0.0 2 0.0 0.0 0.0 1.880208502660468 0.0 3 0.0 0.0 0.0 2.708150460027959 0.0 4 0.0 0.0 0.0 3.7988881303033257 0.0 5 0.0 0.0 0.0 5.955980363470854 0.0 6 0.0 0.0 0.0 7.728903193645221 0.0 7 0.0 0.0 0.0 9.378826793242085 0.0 8 0.0 0.0 0.0 11.965603563184759 0.0 9 0.0 0.0 0.0 13.20914203972821 0.0 10 0.0 0.0 0.0 15.918376193417645 0.0 11 0.0 0.0 0.0 21.41270305709982 0.0 12 0.0 0.0 0.0 26.32617011823098 0.0 13 0.0 0.0 0.0 28.097467407913133 0.0 14 0.0 0.0 0.0 28.73955590233753 0.001083693661475774 15 0.0 0.0 0.0 29.675325379021857 0.001083693661475774 16 0.0 0.0 0.0 31.71537869675 0.001083693661475774 17 0.0 0.0 0.0 34.36663523955048 0.001083693661475774 18 0.0 0.0 0.0 36.761598231411945 0.001083693661475774 19 0.0 0.0 0.0 38.14276580296282 0.001083693661475774 20 0.0 0.0 0.0 39.47299977242433 0.001083693661475774 21 0.0 0.0 0.0 40.94032099006253 0.001083693661475774 22 0.0 0.0 0.0 42.14972311626949 0.001083693661475774 23 0.0 0.0 0.0 43.08549259295383 0.001083693661475774 24 0.0 0.0 0.0 43.57532212794087 0.001083693661475774 25 0.0 0.0 0.0 43.92156225278239 0.001083693661475774 26 0.0 0.0 0.0 44.19194382132059 0.001083693661475774 27 0.0 0.0 0.0 44.44010966979854 0.001083693661475774 28 0.0 0.0 0.0 44.64655331230968 0.001083693661475774 29 0.0 0.0 0.0 44.8399926308831 0.001083693661475774 30 0.0 0.0 0.0 45.11904374871311 0.001083693661475774 31 0.0 0.0 0.0 45.28647441941112 0.001083693661475774 32 0.0 0.0 0.0 45.515133781982506 0.001083693661475774 33 0.0 0.0 0.0 45.6966524702797 0.001083693661475774 34 0.0 0.0 0.0 45.86245760048549 0.001083693661475774 35 0.0 0.0 0.0 46.042350748290474 0.001083693661475774 36 0.0 0.0 0.0 46.18810754575897 0.001083693661475774 37 0.0 0.0 0.0 46.33928281153484 0.001083693661475774 38 0.0 0.0 0.0 46.50996456321727 0.001083693661475774 39 0.0 0.0 0.0 46.73591469163497 0.001083693661475774 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTGTTG 30 2.1555734E-6 45.000004 1 GTTTCGG 35 1.2045348E-7 45.000004 2 CGCGGGA 70 0.0 45.000004 4 GCTTGCG 35 1.2045348E-7 45.000004 1 ATTGGGA 70 0.0 45.000004 4 GTCCAGG 30 2.1555734E-6 45.000004 2 TGTTTCG 25 3.8780465E-5 45.0 1 ATGGGCG 25 3.8780465E-5 45.0 5 ATGGGCA 20 7.0178864E-4 45.0 5 TCGTTAG 20 7.0178864E-4 45.0 1 GGATGAT 20 7.0178864E-4 45.0 8 CCTAGGG 45 3.8016879E-10 45.0 3 TTGCTCG 20 7.0178864E-4 45.0 1 TGGGTAC 45 3.8016879E-10 45.0 6 GGCCGAT 20 7.0178864E-4 45.0 8 GGATAGT 25 3.8780465E-5 45.0 8 TCGGAAT 20 7.0178864E-4 45.0 5 CGAGGGA 20 7.0178864E-4 45.0 4 CGGGATA 25 3.8780465E-5 45.0 6 GGACGGA 20 7.0178864E-4 45.0 8 >>END_MODULE