##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933728.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2041393 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.482950122783805 34.0 31.0 34.0 31.0 34.0 2 32.69125788126049 34.0 31.0 34.0 31.0 34.0 3 32.723594623867136 34.0 31.0 34.0 31.0 34.0 4 36.22159868286018 37.0 35.0 37.0 35.0 37.0 5 36.23418322684559 37.0 35.0 37.0 35.0 37.0 6 36.217664604512706 37.0 37.0 37.0 35.0 37.0 7 36.291398569506214 37.0 37.0 37.0 35.0 37.0 8 36.2019738482497 37.0 37.0 37.0 35.0 37.0 9 38.028677966467015 39.0 39.0 39.0 35.0 39.0 10 37.52782389280261 39.0 37.0 39.0 35.0 39.0 11 37.38839214203242 39.0 37.0 39.0 34.0 39.0 12 37.48519515840409 39.0 37.0 39.0 35.0 39.0 13 37.515518569917695 39.0 37.0 39.0 35.0 39.0 14 38.84823892312749 40.0 38.0 41.0 35.0 41.0 15 38.881752313248846 40.0 38.0 41.0 35.0 41.0 16 38.89793880943062 40.0 38.0 41.0 35.0 41.0 17 38.84100905607102 40.0 38.0 41.0 35.0 41.0 18 38.336086681986274 39.0 38.0 40.0 35.0 41.0 19 37.837330195606626 38.0 37.0 41.0 34.0 41.0 20 37.24984361169064 38.0 35.0 40.0 34.0 41.0 21 37.15404922031182 38.0 35.0 40.0 33.0 41.0 22 37.15595429199571 38.0 35.0 40.0 33.0 41.0 23 37.08227176246808 38.0 35.0 40.0 33.0 41.0 24 36.98077097354601 38.0 35.0 40.0 33.0 41.0 25 36.918054975205656 38.0 35.0 40.0 33.0 41.0 26 36.869156502447105 38.0 35.0 40.0 33.0 41.0 27 36.787166410387414 38.0 35.0 40.0 33.0 41.0 28 36.63746961021224 38.0 35.0 40.0 33.0 41.0 29 36.50957409964666 38.0 35.0 40.0 33.0 41.0 30 36.29913250412831 38.0 35.0 40.0 32.0 41.0 31 35.877192191802365 38.0 35.0 40.0 31.0 41.0 32 35.181143464291296 38.0 35.0 40.0 24.0 41.0 33 34.2751038139153 38.0 34.0 40.0 18.0 41.0 34 33.46276439666443 38.0 33.0 40.0 13.0 41.0 35 32.919002367501015 38.0 33.0 40.0 10.0 41.0 36 32.629223280377666 38.0 32.0 40.0 8.0 41.0 37 32.42140489361921 38.0 31.0 40.0 8.0 41.0 38 32.299272604540135 38.0 31.0 40.0 8.0 41.0 39 32.173745084851376 38.0 31.0 40.0 8.0 41.0 40 32.00684973447053 38.0 30.0 40.0 7.0 41.0 41 31.8395536773174 37.0 30.0 40.0 7.0 41.0 42 31.70709559599744 37.0 29.0 40.0 7.0 41.0 43 31.561103129088814 37.0 28.0 40.0 7.0 41.0 44 31.415138584290236 37.0 27.0 40.0 7.0 41.0 45 31.38953449923655 37.0 27.0 40.0 7.0 41.0 46 31.249578106714385 37.0 26.0 40.0 7.0 41.0 47 31.159978504873877 37.0 25.0 40.0 7.0 41.0 48 31.078589472972624 36.0 25.0 40.0 7.0 41.0 49 31.068520858061138 36.0 26.0 40.0 7.0 41.0 50 30.97212442680072 36.0 25.0 40.0 7.0 41.0 51 30.19462004621354 35.0 24.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 4.0 10 3.0 11 8.0 12 11.0 13 11.0 14 25.0 15 54.0 16 118.0 17 314.0 18 677.0 19 1557.0 20 2749.0 21 4626.0 22 7232.0 23 12850.0 24 25074.0 25 52705.0 26 87432.0 27 96102.0 28 81984.0 29 65818.0 30 55631.0 31 53442.0 32 54486.0 33 62228.0 34 89139.0 35 122779.0 36 158703.0 37 189635.0 38 353824.0 39 462030.0 40 141.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 16.588917469590616 3.2459697863174806 41.19010891092504 38.97500383316686 2 42.587292108868795 3.3927813017875534 40.478046118508296 13.541880470835357 3 14.148378092802316 3.3427664344886066 67.72625359252235 14.782601880186716 4 12.05916744105618 3.4211932734167303 68.01292058902916 16.50671869649793 5 12.085717938682066 4.3631970913978835 66.91180972992463 16.639275239995435 6 15.24287582057938 4.997224934150357 67.78518394057392 11.974715304696353 7 61.33468665759116 1.315572258746846 34.29413150726 3.055609576401996 8 63.563311914952195 1.5588865054401577 32.33532200806018 2.542479571547468 9 58.656221511487495 4.384506070119766 33.73691396022226 3.2223584581704747 10 24.550196850875846 26.631667689660933 38.73056290483998 10.087572554623241 11 16.200996084536392 19.454362780709054 50.097408975145896 14.247232159608657 12 14.965418221773074 18.186894929099886 51.41920247595637 15.428484373170672 13 16.07573847857811 17.532194927679285 52.77455149498407 13.617515098758542 14 14.82737522858166 19.139871646468855 51.759068440030894 14.273684684918583 15 13.309000275792068 19.851689508095696 52.75432021173777 14.084990004374465 16 15.209810163941976 20.004183417891603 50.73560064132678 14.05040577683964 17 15.078184357446117 19.565365414694767 50.23060233869715 15.125847889161959 18 15.094545734211884 19.056840108690487 50.80844305824503 15.040171098852598 19 15.164546953967218 20.638358219118025 49.729914817969885 14.467180008944872 20 15.758847022596825 21.74142852454182 48.466365858999225 14.033358593862133 21 16.051441344219363 21.42615361177392 49.06566251574292 13.456742528263788 22 15.501326790088923 19.85923337642482 49.13997451740062 15.499465316085633 23 13.691827100416235 21.266507722912735 48.88475663431784 16.156908542353186 24 13.467323538387758 21.375110035157366 49.46480173097488 15.69276469548 25 13.924364392353652 22.519720602549338 47.91693711108052 15.638977894016486 26 14.115410408480875 22.82015270944889 47.43099442390564 15.633442458164595 27 13.959634426100218 21.824949923900004 48.472195211799004 15.743220438200778 28 13.53869637056657 21.407930761004863 48.42609923713856 16.627273631290006 29 14.277015743661314 20.09760002116202 47.74788587988692 17.877498355289745 30 15.320175977873932 20.666084384535463 46.80108141842359 17.21265821916701 31 14.918734413216859 22.467697302773153 45.183313551089874 17.43025473292012 32 14.364554007973968 23.072578381526732 43.81366057393162 18.74920703656768 33 15.084258641035802 23.35126063428257 42.19795012523311 19.366530599448513 34 14.659744595969517 24.70788329341778 40.53036333523236 20.10200877538034 35 14.46600434115332 25.489751360957936 39.03079906710761 21.013445230781137 36 15.176009714934851 26.21974308719585 38.10990828321641 20.494338914652886 37 15.182132984682518 27.742232877255873 38.273522050874085 18.802112087187524 38 15.429317137856355 26.94865711795818 38.57243558687621 19.049590157309247 39 16.010243985357057 26.316833652314862 37.855131275555465 19.81779108677261 40 16.841833003248272 26.493330779521628 37.87614633732946 18.788689879900637 41 15.921383094778907 26.825995778372906 38.17858687670625 19.07403425014194 42 16.390866432872066 26.839417985659793 38.45516272466889 18.314552856799253 43 16.293481950805162 26.390361875444857 38.57792203657013 18.73823413717986 44 16.59881267350285 26.696427390512262 37.08271753650571 19.622042399479177 45 17.095140426169777 26.01150292961718 36.26469768437532 20.62865895983772 46 17.344137067188925 26.32765959322874 36.750444426918286 19.57775891266405 47 16.15769232088089 26.97883259127468 37.517812591695964 19.345662496148464 48 16.05300890127477 26.15517933097645 38.22478082368265 19.567030944066136 49 17.197227579402888 25.155469818893277 38.14992997428717 19.49737262741667 50 16.40134947068007 25.143174293239962 37.97519634876773 20.480279887312243 51 15.998781224389425 24.668988283980596 37.58267026486325 21.74956022676672 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 946.0 1 2354.0 2 3762.0 3 93440.5 4 183119.0 5 118456.5 6 53794.0 7 52106.0 8 50418.0 9 50363.5 10 50309.0 11 49212.5 12 48116.0 13 46523.0 14 44930.0 15 42406.0 16 39882.0 17 37472.5 18 35063.0 19 32891.5 20 30720.0 21 29467.0 22 28214.0 23 27249.5 24 26285.0 25 27191.5 26 29005.0 27 29912.0 28 32894.5 29 35877.0 30 38926.5 31 41976.0 32 46564.5 33 51153.0 34 55842.5 35 60532.0 36 65202.5 37 69873.0 38 74925.5 39 79978.0 40 85515.0 41 91052.0 42 96792.5 43 102533.0 44 109025.5 45 115518.0 46 126828.0 47 138138.0 48 143143.5 49 148149.0 50 139526.5 51 130904.0 52 113487.5 53 96071.0 54 82298.5 55 68526.0 56 59034.5 57 49543.0 58 42676.5 59 35810.0 60 31631.5 61 27453.0 62 22995.5 63 18538.0 64 14985.0 65 11432.0 66 8897.0 67 6362.0 68 4868.5 69 3375.0 70 2622.5 71 1870.0 72 1515.0 73 1160.0 74 1046.5 75 742.5 76 552.0 77 434.5 78 317.0 79 210.5 80 104.0 81 73.0 82 42.0 83 40.5 84 39.0 85 23.5 86 8.0 87 6.5 88 5.0 89 3.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2041393.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.168844832501485 #Duplication Level Percentage of deduplicated Percentage of total 1 75.49217928471745 28.814492771857637 2 8.181833504417744 6.245822669509655 3 3.812843327953698 4.365954760659098 4 2.364888421739005 3.610602368621417 5 1.6843414701083286 3.2144684108756114 6 1.2305490394685867 2.8181181207756136 7 0.9982905151329154 2.667251703890636 8 0.81788061144656 2.497404651985215 9 0.6885150410301822 2.365184138933198 >10 4.580959940142264 28.680715040850547 >50 0.0876071941744326 2.291115688206735 >100 0.05456538769378511 3.9158496382503696 >500 0.0029666052423737866 0.8220635589737707 >1k 0.0023216910592490504 1.454340615381732 >5k 1.2898283662494725E-4 0.282538194092135 >10k+ 1.2898283662494725E-4 5.954077667136592 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 120941 5.924434932421145 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCCACCATTTCGTATGCC 5739 0.28113156065490574 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCCACCATTTCGTATGC 3318 0.1625360721820835 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 2271 0.11124756477562137 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.4493078990669607E-4 0.0 0.0 0.1091901461404051 0.0 2 2.4493078990669607E-4 0.0 0.0 0.34456863524074005 0.0 3 2.4493078990669607E-4 0.0 0.0 0.5411011010618729 0.0 4 2.4493078990669607E-4 0.0 0.0 0.8357528413196283 0.0 5 2.4493078990669607E-4 0.0 0.0 1.4801657495641456 0.0 6 2.939169478880353E-4 0.0 0.0 2.391161329543111 0.0 7 2.939169478880353E-4 0.0 0.0 3.255718031755767 0.0 8 2.939169478880353E-4 0.0 0.0 4.405619104209723 0.0 9 2.939169478880353E-4 0.0 0.0 5.146828660625367 0.0 10 2.939169478880353E-4 0.0 0.0 6.031616646084316 0.0 11 2.939169478880353E-4 0.0 0.0 7.509088156959488 0.0 12 2.939169478880353E-4 0.0 0.0 8.762203064280126 0.0 13 2.939169478880353E-4 0.0 0.0 9.286795830102289 0.0 14 2.939169478880353E-4 0.0 0.0 9.534273900224013 0.0 15 3.429031058693745E-4 0.0 0.0 9.767937873795002 0.0 16 3.429031058693745E-4 0.0 0.0 10.183095562686852 0.0 17 3.429031058693745E-4 0.0 0.0 10.735757397032321 0.0 18 3.429031058693745E-4 0.0 0.0 11.304780608143556 0.0 19 3.429031058693745E-4 0.0 0.0 11.678838910489063 0.0 20 3.429031058693745E-4 0.0 0.0 12.040552701023271 0.0 21 3.429031058693745E-4 0.0 0.0 12.430678463186657 0.0 22 3.429031058693745E-4 0.0 0.0 12.822616713195352 0.0 23 3.429031058693745E-4 0.0 0.0 13.162874566533734 0.0 24 3.429031058693745E-4 0.0 0.0 13.409078996547946 0.0 25 3.429031058693745E-4 0.0 0.0 13.618200904970282 0.0 26 3.429031058693745E-4 0.0 0.0 13.808561114885766 0.0 27 3.429031058693745E-4 0.0 0.0 14.00837565329165 0.0 28 3.429031058693745E-4 0.0 0.0 14.211913139704114 0.0 29 3.429031058693745E-4 0.0 0.0 14.424953940764958 0.0 30 3.429031058693745E-4 0.0 0.0 14.660920263761069 0.0 31 3.918892638507137E-4 0.0 0.0 14.87381410634797 0.0 32 4.408754218320529E-4 0.0 0.0 15.08200527776866 0.0 33 4.408754218320529E-4 0.0 0.0 15.28461202717948 0.0 34 4.408754218320529E-4 0.0 0.0 15.504021028777899 0.0 35 4.408754218320529E-4 0.0 0.0 15.730386064809666 0.0 36 5.388477377947313E-4 0.0 0.0 15.945680229137652 0.0 37 5.388477377947313E-4 0.0 0.0 16.172976002171065 0.0 38 5.388477377947313E-4 0.0 0.0 16.40644403111013 0.0 39 5.388477377947313E-4 0.0 0.0 16.69100462282373 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCGTG 45 3.8562575E-10 45.0 1 CGTTTTT 58420 0.0 44.437695 1 CTTCGCG 115 0.0 41.08696 1 GTTTACG 55 6.184564E-11 40.909092 1 GTTTTTT 65050 0.0 40.365105 2 CTGCGCG 150 0.0 39.000004 1 GCGCGAC 35 6.2506733E-6 38.571426 9 CGCGACC 35 6.2506733E-6 38.571426 10 GACCGAT 730 0.0 37.910957 9 CCGTTCG 30 1.14023234E-4 37.499996 1 TGGGCGA 2635 0.0 37.485767 6 TTGGGAC 4705 0.0 36.63124 5 CGGGTAT 160 0.0 36.5625 6 TCTTGCG 425 0.0 36.52941 1 TACGGGA 235 0.0 36.38298 4 GGACCGA 830 0.0 36.3253 8 GGCCGAT 585 0.0 36.153843 8 TTGGGAT 8645 0.0 36.150955 5 GGCGATC 880 0.0 36.051136 8 CTCGTTG 150 0.0 36.000004 1 >>END_MODULE