SRR2933726.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933726.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	475666
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	18010	3.786270197996073	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCC	2466	0.5184309999032936	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGC	1310	0.27540332922681043	No Hit
CTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCTGCT	1057	0.22221474732270122	No Hit
TCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCTGC	873	0.1835321423015309	No Hit
CCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCTGC	817	0.17175917555595732	No Hit
GCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCTGC	767	0.16124759810455236	No Hit
CGTTTTTTTCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCG	492	0.10343392212182499	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGCGAC	20	7.029111E-4	45.000004	9
GGCGTAT	20	7.029111E-4	45.000004	8
ACGGGAC	20	7.029111E-4	45.000004	5
GCTCTAT	20	7.029111E-4	45.000004	9
GCCGATT	40	6.8012014E-9	45.000004	9
GGGCGTA	20	7.029111E-4	45.000004	7
GGCGCGA	20	7.029111E-4	45.000004	8
GGCGATA	20	7.029111E-4	45.000004	8
CGACGTG	25	3.8873466E-5	45.0	18
GTTTCCG	25	3.8873466E-5	45.0	1
GCCGATC	25	3.8873466E-5	45.0	9
CGTTTTT	10125	0.0	44.288887	1
GGCCGAT	85	0.0	42.35294	8
CGGGATA	55	6.002665E-11	40.909092	6
GCACGGG	50	1.0786607E-9	40.5	3
ACACGAC	45	1.9243089E-8	40.000004	26
GACACGA	45	1.9243089E-8	40.000004	25
TCGGGTC	45	1.9243089E-8	40.000004	5
AGGGTGC	45	1.9243089E-8	40.000004	6
TGCACGG	45	1.9243089E-8	40.000004	2