SRR2933725.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933725.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	479800
Sequences flagged as poor quality	0
Sequence length	51
%GC	38

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17648	3.6781992496873697	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCC	2487	0.5183409754064194	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGC	1372	0.2859524802000834	No Hit
CTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCTGCT	1034	0.21550646102542725	No Hit
TCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCTGC	897	0.1869528970404335	No Hit
CCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCTGC	842	0.17548978741142143	No Hit
GCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCTGC	745	0.15527303042934557	No Hit
CGTTTTTTTCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCG	488	0.10170904543559817	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCGTTG	30	2.1628475E-6	45.000004	1
GCTAGCG	30	2.1628475E-6	45.000004	1
TATCCGG	30	2.1628475E-6	45.000004	2
CGCATGG	25	3.8873975E-5	45.0	2
TAGCGGA	25	3.8873975E-5	45.0	3
TACGGGT	25	3.8873975E-5	45.0	4
CACTGCG	25	3.8873975E-5	45.0	1
CCTCGTT	20	7.029174E-4	45.0	14
TTATCCG	20	7.029174E-4	45.0	1
TCGGAAT	20	7.029174E-4	45.0	5
CCTCCGC	25	3.8873975E-5	45.0	45
TATTCGG	20	7.029174E-4	45.0	2
CGGGCTA	20	7.029174E-4	45.0	6
TTGGTCG	20	7.029174E-4	45.0	1
CTAGCGG	35	1.2099554E-7	45.0	2
CGTTTTT	10235	0.0	44.362484	1
GGACCGA	190	0.0	41.44737	8
CCGCTTG	50	1.0786607E-9	40.5	1
GCGTTTG	125	0.0	39.6	1
GTTTTTT	11870	0.0	39.408173	2