##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933725.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 479800 Sequences flagged as poor quality 0 Sequence length 51 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.11639849937474 33.0 31.0 34.0 30.0 34.0 2 32.336811171321386 34.0 31.0 34.0 30.0 34.0 3 32.44204251771571 34.0 31.0 34.0 30.0 34.0 4 35.94864735306378 37.0 35.0 37.0 35.0 37.0 5 36.036734055856606 37.0 35.0 37.0 35.0 37.0 6 36.027901208837015 37.0 35.0 37.0 35.0 37.0 7 36.05496248436849 37.0 35.0 37.0 35.0 37.0 8 35.97937473947478 37.0 35.0 37.0 35.0 37.0 9 37.80190287619842 39.0 38.0 39.0 35.0 39.0 10 37.11032513547311 39.0 37.0 39.0 33.0 39.0 11 37.08231137974156 39.0 37.0 39.0 33.0 39.0 12 37.167724051688204 39.0 37.0 39.0 34.0 39.0 13 37.20362025844102 39.0 37.0 39.0 34.0 39.0 14 38.38976240100042 40.0 38.0 41.0 34.0 41.0 15 38.41373905794081 40.0 38.0 41.0 34.0 41.0 16 38.53917048770321 40.0 38.0 41.0 34.0 41.0 17 38.56473322217591 40.0 38.0 41.0 34.0 41.0 18 38.267232180075034 39.0 38.0 41.0 34.0 41.0 19 37.9242851187995 39.0 37.0 41.0 34.0 41.0 20 37.374506044185075 39.0 35.0 40.0 34.0 41.0 21 37.3054355981659 39.0 35.0 40.0 33.0 41.0 22 37.313720300125055 39.0 35.0 40.0 33.0 41.0 23 37.182034180908715 38.0 35.0 40.0 33.0 41.0 24 37.07150687786578 38.0 35.0 40.0 33.0 41.0 25 36.98722175906628 38.0 35.0 40.0 33.0 41.0 26 36.9970050020842 38.0 35.0 40.0 33.0 41.0 27 36.91533347228012 38.0 35.0 40.0 33.0 41.0 28 36.86040016673614 38.0 35.0 40.0 33.0 41.0 29 36.65453939141309 38.0 35.0 40.0 33.0 41.0 30 36.3297332221759 38.0 35.0 40.0 31.0 41.0 31 35.916042100875366 38.0 35.0 40.0 30.0 41.0 32 35.40937057107128 38.0 35.0 40.0 25.0 41.0 33 34.609956231763235 38.0 34.0 40.0 20.0 41.0 34 34.02349103793247 38.0 34.0 40.0 15.0 41.0 35 33.611811171321385 38.0 33.0 40.0 12.0 41.0 36 33.31238224260108 38.0 33.0 40.0 10.0 41.0 37 33.19917674030846 38.0 33.0 40.0 10.0 41.0 38 33.12965819091288 38.0 33.0 40.0 10.0 41.0 39 33.0438495206336 38.0 33.0 40.0 10.0 41.0 40 32.892325969153816 38.0 33.0 40.0 10.0 41.0 41 32.841390162567734 38.0 32.0 40.0 10.0 41.0 42 32.72345560650271 38.0 32.0 40.0 9.0 41.0 43 32.681300541892455 38.0 32.0 40.0 9.0 41.0 44 32.56302834514381 38.0 31.0 40.0 8.0 41.0 45 32.48344726969571 38.0 31.0 40.0 8.0 41.0 46 32.27949979157982 37.0 31.0 40.0 8.0 41.0 47 32.23779699874948 37.0 31.0 40.0 8.0 41.0 48 32.16035014589412 37.0 31.0 40.0 8.0 41.0 49 32.168155481450604 37.0 31.0 40.0 8.0 41.0 50 32.00068570237599 37.0 30.0 40.0 8.0 41.0 51 31.209912463526468 36.0 28.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 3.0 11 3.0 12 7.0 13 6.0 14 15.0 15 17.0 16 43.0 17 77.0 18 162.0 19 338.0 20 664.0 21 1043.0 22 1767.0 23 3186.0 24 6387.0 25 12324.0 26 18528.0 27 18176.0 28 14456.0 29 11537.0 30 10669.0 31 11171.0 32 12731.0 33 16103.0 34 23536.0 35 30832.0 36 40374.0 37 52604.0 38 92911.0 39 100090.0 40 35.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.783243017924136 4.571696540225094 44.16965402250938 31.47540641934139 2 38.32951229679033 4.254689453939141 42.64589412255106 14.769904126719466 3 16.85493955814923 3.936015006252605 62.76406836181743 16.44497707378074 4 13.138182576073365 4.1661108795331385 63.858065860775326 18.837640683618172 5 12.467278032513548 4.996665277198833 63.86202584410171 18.67403084618591 6 15.966235931638181 6.512296790329304 65.6317215506461 11.88974572738641 7 65.65152146727803 1.7150896206752815 29.098165902459357 3.535223009587328 8 67.07419758232597 1.8286786160900377 27.115256356815337 3.9818674447686537 9 61.645685702375985 4.736140058357649 29.145894122551063 4.4722801167152975 10 27.783243017924136 19.86140058357649 37.753647353063776 14.601709045435598 11 19.75239683201334 20.91725719049604 41.28928720300125 18.041058774489372 12 16.189870779491457 18.402667778240932 47.0208420175073 18.386619424760315 13 18.747394747811587 19.503126302626093 48.54147561483952 13.2080033347228 14 17.7919966652772 20.760525218841185 47.18945393914131 14.258024176740308 15 14.413714047519798 20.950604418507712 48.68695289704043 15.948728636932055 16 14.63651521467278 20.27344726969571 46.635889954147565 18.454147561483953 17 15.192788661942478 20.71717382242601 44.86890370987911 19.221133805752398 18 16.076490204251773 18.994997915798248 47.1394330971238 17.789078782826177 19 16.442476031679867 22.663609837432265 45.68841183826595 15.205502292621926 20 16.25406419341392 23.601292205085453 44.8151313047103 15.329512296790329 21 15.77303042934556 24.087119633180492 45.16381825760733 14.976031679866612 22 14.507294706127553 22.281158816173406 44.20466861192163 19.00687786577741 23 13.603376406836182 23.936015006252607 42.7234264276782 19.737182159233015 24 13.997707378074198 23.47311379741559 43.09045435598166 19.438724468528555 25 13.26448520216757 25.22446852855356 41.67736556898708 19.83368070029179 26 13.478324301792414 25.38557732388495 42.81888286786161 18.317215506461025 27 14.1802834514381 25.073989162150895 43.670279283034596 17.075448103376406 28 13.379949979157981 22.91871613172155 43.439558149228844 20.261775739891622 29 14.735931638182576 22.487494789495624 42.03459774906211 20.741975823259693 30 17.568153397248853 24.231763234681118 39.89516465193831 18.30491871613172 31 15.935806586077533 27.341392246769487 36.93226344310129 19.79053772405169 32 15.573363901625678 26.267611504793663 35.936223426427674 22.22280116715298 33 17.49937473947478 25.343059608170073 35.081909128803666 22.07565652355148 34 16.69591496456857 24.539391413088786 34.11296373488954 24.651729887453104 35 16.389537307211338 25.94622759483118 31.887869945810753 25.77636515214673 36 16.710921217173823 28.263443101292207 32.20216756982076 22.823468111713215 37 16.765527303042933 29.776781992496876 31.57940808670279 21.8782826177574 38 19.636098374322632 26.01083784910379 32.068778657774075 22.2842851187995 39 20.131304710295957 24.69528970404335 34.65923301375573 20.51417257190496 40 18.313672363484784 26.83451438099208 33.7303042934556 21.12150896206753 41 16.081909128803666 27.71842434347645 31.54647769904127 24.653188828678616 42 17.053147144643603 26.281158816173406 33.68924551896624 22.976448520216756 43 17.761567319716548 24.82596915381409 36.05106294289287 21.36140058357649 44 18.78991246352647 24.61796581909129 33.283243017924136 23.30887869945811 45 20.26052521884118 24.129637348895372 32.2180075031263 23.39182992913714 46 19.843268028345143 26.0154230929554 33.34576907044602 20.795539808253437 47 16.082325969153814 27.613588995414755 35.396206752813676 20.907878282617755 48 16.765527303042933 26.04210087536474 35.97498957899125 21.217382242601087 49 19.706544393497293 23.007294706127553 36.74551896623593 20.540641934139224 50 18.415381408920382 22.754272613588995 34.58711963318049 24.243226344310127 51 17.110671112963736 22.713213839099623 32.771154647769904 27.404960400166733 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 431.0 1 861.0 2 1291.0 3 14159.5 4 27028.0 5 17938.0 6 8848.0 7 8697.5 8 8547.0 9 8679.0 10 8811.0 11 8995.0 12 9179.0 13 8903.0 14 8627.0 15 8261.0 16 7895.0 17 7574.5 18 7254.0 19 6723.5 20 6193.0 21 5924.0 22 5655.0 23 5574.0 24 5493.0 25 5364.0 26 5323.0 27 5411.0 28 5522.5 29 5634.0 30 6232.5 31 6831.0 32 7549.0 33 8267.0 34 9251.0 35 10235.0 36 11262.5 37 12290.0 38 13768.5 39 15247.0 40 17603.5 41 19960.0 42 22961.0 43 25962.0 44 28998.5 45 32035.0 46 37547.0 47 43059.0 48 48139.5 49 53220.0 50 50022.5 51 46825.0 52 38887.0 53 30949.0 54 24708.5 55 18468.0 56 15036.5 57 11605.0 58 9843.0 59 8081.0 60 6887.0 61 5693.0 62 4750.0 63 3807.0 64 3139.0 65 2471.0 66 1901.0 67 1331.0 68 1049.5 69 768.0 70 638.0 71 508.0 72 393.5 73 279.0 74 221.0 75 120.5 76 78.0 77 61.0 78 44.0 79 43.5 80 43.0 81 36.5 82 30.0 83 22.0 84 14.0 85 9.5 86 5.0 87 2.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 479800.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.150970139522855 #Duplication Level Percentage of deduplicated Percentage of total 1 76.99465520933192 38.613566543060635 2 9.76081119072602 9.790283011272424 3 4.427077445571107 6.66066686334575 4 2.447350669945916 4.909480414775956 5 1.5772810054849464 3.9551086303856064 6 1.074942101560474 3.234563354224517 7 0.7342719409994429 2.5777115131146786 8 0.5369039186002132 2.154100191160968 9 0.4371561116765934 1.9731422792702478 >10 1.9017875107069329 15.730813360794476 >50 0.0735126728329347 2.47995559603655 >100 0.03132642307640267 2.678536379921502 >500 0.0012530569230561066 0.52033192834324 >1k 0.0012530569230561066 1.0249533516036529 >5k 0.0 0.0 >10k+ 4.176856410187022E-4 3.696786582689815 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17648 3.6781992496873697 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCC 2487 0.5183409754064194 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGC 1372 0.2859524802000834 No Hit CTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCTGCT 1034 0.21550646102542725 No Hit TCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCTGC 897 0.1869528970404335 No Hit CCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCTGC 842 0.17548978741142143 No Hit GCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCGTCTTCTGC 745 0.15527303042934557 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCCACGTACTTCGTATGCCG 488 0.10170904543559817 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.22926219258024177 0.0 2 0.0 0.0 0.0 0.7982492705293872 0.0 3 0.0 0.0 0.0 1.161317215506461 0.0 4 0.0 0.0 0.0 1.752396832013339 0.0 5 0.0 0.0 0.0 3.024176740308462 0.0 6 0.0 0.0 0.0 4.232596915381409 0.0 7 0.0 0.0 0.0 5.353063776573572 0.0 8 0.0 0.0 0.0 7.155481450604419 0.0 9 0.0 0.0 0.0 8.017924135056273 0.0 10 0.0 0.0 0.0 9.896206752813672 0.0 11 0.0 0.0 0.0 13.783451438099208 0.0 12 0.0 0.0 0.0 17.073780741975824 0.0 13 0.0 0.0 0.0 18.15756565235515 0.0 14 0.0 0.0 0.0 18.545227177990828 0.0 15 0.0 0.0 0.0 19.046269278866195 0.0 16 0.0 0.0 0.0 20.378907878282618 0.0 17 0.0 0.0 0.0 22.25614839516465 0.0 18 0.0 0.0 0.0 24.097123801583994 0.0 19 0.0 0.0 0.0 25.190496040016672 0.0 20 0.0 0.0 0.0 26.15193830762818 0.0 21 0.0 0.0 0.0 27.348895373072114 0.0 22 0.0 0.0 0.0 28.434556065027095 0.0 23 0.0 0.0 0.0 29.215506461025427 0.0 24 0.0 0.0 0.0 29.677157148812004 0.0 25 0.0 0.0 0.0 30.025218841183825 0.0 26 0.0 0.0 0.0 30.314506044185077 0.0 27 0.0 0.0 0.0 30.588161734055856 0.0 28 0.0 0.0 0.0 30.84493538974573 0.0 29 0.0 0.0 0.0 31.095664860358482 0.0 30 2.0842017507294707E-4 0.0 0.0 31.351187994997915 0.0 31 4.1684035014589413E-4 0.0 0.0 31.58128386827845 0.0 32 4.1684035014589413E-4 0.0 0.0 31.794706127553148 0.0 33 4.1684035014589413E-4 0.0 0.0 32.00979574822843 0.0 34 4.1684035014589413E-4 0.0 0.0 32.22759483117966 0.0 35 6.252605252188412E-4 0.0 0.0 32.45810754481034 0.0 36 6.252605252188412E-4 0.0 0.0 32.6625677365569 0.0 37 6.252605252188412E-4 0.0 0.0 32.891413088787 0.0 38 6.252605252188412E-4 0.0 0.0 33.149020425177156 0.0 39 6.252605252188412E-4 0.0 0.0 33.531263026260945 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCGTTG 30 2.1628475E-6 45.000004 1 GCTAGCG 30 2.1628475E-6 45.000004 1 TATCCGG 30 2.1628475E-6 45.000004 2 CGCATGG 25 3.8873975E-5 45.0 2 TAGCGGA 25 3.8873975E-5 45.0 3 TACGGGT 25 3.8873975E-5 45.0 4 CACTGCG 25 3.8873975E-5 45.0 1 CCTCGTT 20 7.029174E-4 45.0 14 TTATCCG 20 7.029174E-4 45.0 1 TCGGAAT 20 7.029174E-4 45.0 5 CCTCCGC 25 3.8873975E-5 45.0 45 TATTCGG 20 7.029174E-4 45.0 2 CGGGCTA 20 7.029174E-4 45.0 6 TTGGTCG 20 7.029174E-4 45.0 1 CTAGCGG 35 1.2099554E-7 45.0 2 CGTTTTT 10235 0.0 44.362484 1 GGACCGA 190 0.0 41.44737 8 CCGCTTG 50 1.0786607E-9 40.5 1 GCGTTTG 125 0.0 39.6 1 GTTTTTT 11870 0.0 39.408173 2 >>END_MODULE