##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933724.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 92287 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.936469925341598 33.0 31.0 34.0 30.0 34.0 2 32.148840031640425 33.0 31.0 34.0 30.0 34.0 3 32.23638215566656 33.0 31.0 34.0 30.0 34.0 4 35.86690433105421 37.0 35.0 37.0 35.0 37.0 5 35.89929242471854 37.0 35.0 37.0 35.0 37.0 6 35.87126030751894 37.0 35.0 37.0 35.0 37.0 7 35.870718519401436 37.0 35.0 37.0 35.0 37.0 8 35.65951867543641 37.0 35.0 37.0 33.0 37.0 9 37.48660157985415 39.0 37.0 39.0 34.0 39.0 10 37.11480490209889 39.0 37.0 39.0 33.0 39.0 11 37.110665640881166 39.0 37.0 39.0 33.0 39.0 12 37.15872224690368 39.0 37.0 39.0 34.0 39.0 13 37.066130657622416 39.0 37.0 39.0 33.0 39.0 14 38.09481292056303 40.0 37.0 41.0 33.0 41.0 15 38.13150281188033 40.0 37.0 41.0 33.0 41.0 16 38.189777541798954 40.0 37.0 41.0 33.0 41.0 17 38.173718941996164 40.0 37.0 41.0 33.0 41.0 18 37.863382708290445 39.0 37.0 40.0 33.0 41.0 19 37.5137993433528 38.0 37.0 40.0 33.0 41.0 20 36.99840714293454 38.0 35.0 40.0 33.0 41.0 21 36.86989500146283 38.0 35.0 40.0 33.0 41.0 22 36.85759641119551 38.0 35.0 40.0 33.0 41.0 23 36.83369271945128 38.0 35.0 40.0 33.0 41.0 24 36.7027642029755 38.0 35.0 40.0 32.0 41.0 25 36.574078689306184 38.0 35.0 40.0 32.0 41.0 26 36.451407023741154 38.0 35.0 40.0 32.0 41.0 27 36.350536912024445 38.0 35.0 40.0 32.0 41.0 28 36.273050375459164 38.0 35.0 40.0 31.0 41.0 29 36.20300800762838 38.0 35.0 40.0 31.0 41.0 30 36.09737016047764 38.0 35.0 40.0 31.0 41.0 31 35.80717760898068 38.0 35.0 40.0 30.0 41.0 32 35.382675783154724 38.0 35.0 40.0 28.0 41.0 33 34.89910821675859 38.0 35.0 40.0 24.0 41.0 34 34.47023957870556 38.0 34.0 40.0 21.0 41.0 35 34.031932991645625 38.0 34.0 40.0 18.0 41.0 36 33.75112421034382 37.0 33.0 40.0 18.0 41.0 37 33.54132217972195 37.0 33.0 40.0 15.0 41.0 38 33.57600745500449 37.0 33.0 40.0 15.0 41.0 39 33.59041901893008 37.0 33.0 40.0 15.0 41.0 40 33.40143248778268 37.0 33.0 40.0 15.0 41.0 41 33.21494901773814 37.0 33.0 40.0 15.0 41.0 42 33.032669823485435 37.0 33.0 40.0 13.0 41.0 43 32.66905414630446 37.0 31.0 40.0 12.0 41.0 44 32.45908957924735 36.0 31.0 40.0 10.0 41.0 45 32.57467465623544 37.0 31.0 40.0 10.0 41.0 46 32.34770877805108 36.0 31.0 40.0 10.0 41.0 47 32.12897807925277 36.0 31.0 40.0 10.0 41.0 48 32.08508240597267 36.0 31.0 39.0 10.0 41.0 49 32.08926501023979 36.0 31.0 39.0 10.0 41.0 50 31.999555733743648 36.0 31.0 39.0 10.0 41.0 51 30.845882952095096 35.0 27.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 1.0 14 1.0 15 3.0 16 8.0 17 26.0 18 40.0 19 81.0 20 150.0 21 202.0 22 333.0 23 578.0 24 922.0 25 1575.0 26 2416.0 27 2752.0 28 2633.0 29 2513.0 30 2530.0 31 2790.0 32 3111.0 33 4056.0 34 5546.0 35 8202.0 36 10727.0 37 12133.0 38 17918.0 39 11036.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.838113710490102 4.266039637218676 38.11912837127656 37.77671828101466 2 40.37621766879409 4.143595522662997 37.905663852980375 17.57452295556254 3 16.088939937369293 4.263872484748664 61.776848310162855 17.870339267719178 4 13.990052770162645 4.233532350168496 62.678383737687874 19.098031141980996 5 11.719960557825045 5.120981286638422 62.72281036332311 20.436247792213422 6 14.840660114642365 6.123289304018984 65.11426311398138 13.921787467357266 7 52.831926490188216 2.4683866633436997 37.32378341478215 7.375903431685936 8 50.65827256276615 3.1770455210376323 37.012797035335424 9.151884880860793 9 45.92196083955486 4.925937564337339 40.387053431144146 8.765048164963646 10 23.832175712722268 17.450995264771855 44.22616403177045 14.490664990735425 11 14.94793416190796 16.52778831254673 46.37489570578738 22.14938181975793 12 13.931539653472319 14.714965271381669 52.83301006642323 18.52048500872279 13 17.074994311224767 16.842025420698473 51.4059401649203 14.677040103156457 14 13.711573677766097 19.346170099797373 50.05688775233782 16.88536847009871 15 9.833454332679576 18.067550142490273 51.457951824200585 20.64104370062956 16 9.589649679803221 19.331000032507287 47.6578499680345 23.42150031965499 17 9.455286226662476 18.748036018074053 46.41607160271761 25.380606152545866 18 10.593041273418793 17.654707596952985 51.19897710403415 20.55327402559407 19 10.815174401595025 18.814134168409417 51.1155417339387 19.25514969605687 20 11.674450355954793 23.25246242699405 48.51495876992426 16.558128447126897 21 11.98543673540152 23.555863772795735 48.504123007574194 15.954576484228546 22 9.591816832273233 23.626296228071126 44.673681016827935 22.1082059228277 23 10.863935332170295 21.88498921841646 42.95729626057842 24.29377918883483 24 13.132943968272887 22.006349756737134 41.88130505921744 22.979401215772537 25 10.230043234691777 24.924420557608332 39.49201946102918 25.353516746670714 26 10.208371709991656 28.118803298406057 40.895250685361965 20.777574306240314 27 11.86841050202087 26.029668317314464 44.33018735033104 17.771733830333634 28 9.10420752652053 22.271825934313608 43.9996965986542 24.624269940511663 29 10.941952821090728 21.676942581295307 43.78514850412301 23.59595609349096 30 15.679348120537021 23.314226272389394 41.502053376965335 19.50437223010825 31 14.685708713036504 27.0991580612654 36.80475039821427 21.41038282748383 32 15.629503613726744 25.416364168301058 35.10461928548983 23.849512932482362 33 19.12620412409115 20.61612144722442 36.98462405322526 23.273050375459164 34 16.059683379024133 19.453444147062967 37.24901665456673 27.23785581934617 35 17.518176991342227 25.474877284991386 32.60264175886095 24.404303964805443 36 19.132705581501185 29.0810189950914 34.544410371991724 17.24186505141569 37 16.385839825760943 25.525805368036668 38.874381007075755 19.213973799126638 38 17.352389827386304 21.138405192497316 37.39855017499757 24.110654805118813 39 19.620314887253894 17.537681363572332 39.33490090695331 23.507102842220466 40 19.71892032463944 18.543240109657916 36.8654306673746 24.87240889832804 41 22.8287841191067 21.744124307865683 30.812573818631012 24.614517754396612 42 26.74374505618343 20.188108834397045 33.612534809886554 19.45561129953298 43 22.81578120428663 18.313521947836637 39.3869125662336 19.483784281643135 44 17.37081062338141 17.53876493980734 38.303336331227584 26.787088105583667 45 20.399406200223215 15.88089330024814 36.44391951195726 27.27578098757138 46 21.935917301461743 16.748837864487957 40.977602479222426 20.337642354827874 47 17.48783685676206 20.459002893148547 41.70576570914647 20.34739454094293 48 17.64495541083793 18.08813809095539 42.5769610020913 21.689945496115378 49 22.746432325246243 14.19268152610877 42.74924962345726 20.31163652518773 50 20.729896951900052 12.995329786427124 38.37701951520799 27.897753746464833 51 17.90284655476936 13.052759326882443 36.32689327857662 32.71750083977158 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 361.0 1 523.0 2 685.0 3 4899.5 4 9114.0 5 5459.5 6 1805.0 7 1712.0 8 1619.0 9 1592.0 10 1565.0 11 1489.5 12 1414.0 13 1344.0 14 1274.0 15 1178.5 16 1083.0 17 1011.0 18 939.0 19 824.5 20 710.0 21 670.5 22 631.0 23 575.0 24 519.0 25 500.0 26 482.5 27 484.0 28 460.5 29 437.0 30 494.0 31 551.0 32 581.5 33 612.0 34 716.5 35 821.0 36 937.5 37 1054.0 38 1260.5 39 1467.0 40 2126.5 41 2786.0 42 3812.5 43 4839.0 44 5148.0 45 5457.0 46 7275.0 47 9093.0 48 11355.0 49 13617.0 50 12948.0 51 12279.0 52 9268.0 53 6257.0 54 4733.5 55 3210.0 56 2579.5 57 1949.0 58 1671.5 59 1394.0 60 1264.0 61 1134.0 62 983.0 63 832.0 64 752.5 65 673.0 66 561.5 67 450.0 68 356.0 69 262.0 70 213.0 71 164.0 72 136.5 73 109.0 74 94.5 75 60.0 76 40.0 77 31.5 78 23.0 79 15.5 80 8.0 81 6.0 82 4.0 83 2.5 84 1.0 85 0.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 92287.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.05109061948053 #Duplication Level Percentage of deduplicated Percentage of total 1 82.06672571597284 45.17862754234074 2 10.585572286192303 11.654945983724685 3 3.326444247613424 5.49373151148049 4 1.3266410786339926 2.9213215295762134 5 0.7400846373388446 2.0371233218113063 6 0.4192500738116327 1.3848104283376856 7 0.2854049798248204 1.099829878531104 8 0.17124298789489226 0.7541690595641857 9 0.16140143686645014 0.7996792614344381 >10 0.7971656333038087 8.02171486774952 >50 0.070859167404783 2.673182571759836 >100 0.0354295837023915 3.5476285934096894 >500 0.003936620411376833 1.3728910897526196 >1k 0.007873240822753666 5.972672207353148 >5k 0.0019683102056884164 7.087672153174336 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6541 7.087672153174336 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCC 1991 2.1574002838969735 No Hit CTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGCT 1331 1.4422399687930043 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGC 1163 1.2601991613119943 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGC 1027 1.1128327933511764 No Hit TCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGC 753 0.8159329049595284 No Hit GCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTGC 514 0.5569581847930911 No Hit CGCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTG 387 0.4193440029473273 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCG 348 0.37708452978209284 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 257 0.27847909239654556 No Hit TCCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTG 241 0.26114187263644933 No Hit TTCCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCT 206 0.22321670441123884 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 187 0.2026287559461246 No Hit CGTTTTTTTTTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATG 171 0.18529153618602837 No Hit TTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTG 166 0.1798736550109983 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTC 162 0.17553935007097424 No Hit CGTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTC 150 0.16253643525090206 No Hit GGCCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCT 149 0.16145285901589607 No Hit GCCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTG 144 0.156034977840866 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGT 143 0.15495140160586 No Hit TGCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTG 121 0.1311127244357277 No Hit TTTCCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTC 115 0.12461126702569159 No Hit CGTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCT 112 0.12136053832067355 No Hit GTTCCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTC 110 0.11919338585066153 No Hit TGCCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCT 105 0.11377550467563145 No Hit GTTTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTC 98 0.10619047103058936 No Hit GTCTGTCTCTTATACACATCTGACGCAATCTCGGTCGTATGCCGTCTTCTG 94 0.1018561660905653 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 93 0.10077258985555929 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.5668512358186961 0.0 2 0.0 0.0 0.0 4.541268000910204 0.0 3 0.0 0.0 0.0 6.227312622579562 0.0 4 0.0 0.0 0.0 8.08456228937987 0.0 5 0.0 0.0 0.0 11.351544637923 0.0 6 0.0 0.0 0.0 13.468852601124752 0.0 7 0.0 0.0 0.0 15.645757257251834 0.0 8 0.0 0.0 0.0 18.341694929946797 0.0 9 0.0 0.0 0.0 19.76226337403968 0.0 10 0.0 0.0 0.0 22.661913378915774 0.0 11 0.0 0.0 0.0 29.852525274415683 0.0 12 0.0 0.0 0.0 35.203224722875376 0.0 13 0.0 0.0 0.0 37.08973094802085 0.0 14 0.0 0.0 0.0 37.89699524310033 0.0 15 0.0 0.0 0.0 38.926392666356044 0.0 16 0.0 0.0 0.0 41.31351111207429 0.0 17 0.0 0.0 0.0 44.09938561227475 0.0 18 0.0 0.0 0.0 46.36839424837734 0.0 19 0.0 0.0 0.0 47.77595977765016 0.0 20 0.0 0.0 0.0 48.847616674071105 0.0 21 0.0 0.0 0.0 49.99404033070747 0.0 22 0.0 0.0 0.0 50.871737081062335 0.0 23 0.0 0.0 0.0 51.48829195878076 0.0 24 0.0 0.0 0.0 51.89354947067301 0.0 25 0.0 0.0 0.0 52.19044935906466 0.0 26 0.0 0.0 0.0 52.41691679218091 0.0 27 0.0 0.0 0.0 52.596790447191914 0.0 28 0.0 0.0 0.0 52.75065827256277 0.0 29 0.0 0.0 0.0 52.87526953958846 0.0 30 0.0 0.0 0.0 53.03997312730937 0.0 31 0.0 0.0 0.0 53.167835123040085 0.0 32 0.0 0.0 0.0 53.29894784747581 0.0 33 0.0 0.0 0.0 53.39972043733137 0.0 34 0.0 0.0 0.0 53.506994484596966 0.0 35 0.0 0.0 0.0 53.62943859915264 0.0 36 0.0 0.0 0.0 53.7291276127732 0.0 37 0.0 0.0 0.0 53.84073596497882 0.0 38 0.0 0.0 0.0 53.92958921624931 0.0 39 0.0 0.0 0.0 54.04553187339495 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCGATG 30 2.1437845E-6 45.000004 8 TTCCTTG 30 2.1437845E-6 45.000004 1 TTGGGTA 30 2.1437845E-6 45.000004 5 GTCTTTG 30 2.1437845E-6 45.000004 1 TTAGGGA 30 2.1437845E-6 45.000004 4 TGGGCTC 30 2.1437845E-6 45.000004 6 GCTTTGG 60 0.0 45.000004 2 CGCTGGG 25 3.8628787E-5 45.0 3 GTGTTTG 25 3.8628787E-5 45.0 1 GGGTTCG 20 6.9995614E-4 45.0 7 TGTCTTA 20 6.9995614E-4 45.0 30 ATGATCT 25 3.8628787E-5 45.0 11 CCTCGGG 40 6.697519E-9 45.0 3 GGCCGGT 20 6.9995614E-4 45.0 9 TGTTCGG 20 6.9995614E-4 45.0 2 AGGGCCT 20 6.9995614E-4 45.0 6 TTACACG 20 6.9995614E-4 45.0 34 AAGGGGC 25 3.8628787E-5 45.0 5 TACACGC 20 6.9995614E-4 45.0 35 TTGGGCA 40 6.697519E-9 45.0 5 >>END_MODULE