##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933721.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 478942 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.97078978247888 33.0 31.0 34.0 30.0 34.0 2 32.16558581206075 33.0 31.0 34.0 30.0 34.0 3 32.320990850666675 34.0 31.0 34.0 30.0 34.0 4 35.841193714479 37.0 35.0 37.0 35.0 37.0 5 35.916806210355325 37.0 35.0 37.0 35.0 37.0 6 35.89705851648007 37.0 35.0 37.0 35.0 37.0 7 35.8910389984591 37.0 35.0 37.0 35.0 37.0 8 35.756093639730906 37.0 35.0 37.0 35.0 37.0 9 37.554221596769544 39.0 37.0 39.0 35.0 39.0 10 37.09082310592932 39.0 37.0 39.0 33.0 39.0 11 37.02242025130391 39.0 37.0 39.0 33.0 39.0 12 37.106954495533905 39.0 37.0 39.0 34.0 39.0 13 37.09928133260395 39.0 37.0 39.0 33.0 39.0 14 38.12472491449904 40.0 38.0 41.0 33.0 41.0 15 38.156555491061546 40.0 37.0 41.0 33.0 41.0 16 38.31867741814249 40.0 38.0 41.0 34.0 41.0 17 38.37796643434904 40.0 38.0 41.0 34.0 41.0 18 38.267942673643155 39.0 38.0 41.0 34.0 41.0 19 38.12242192165231 39.0 37.0 41.0 34.0 41.0 20 37.734980436044445 39.0 35.0 41.0 34.0 41.0 21 37.666874068258785 39.0 35.0 41.0 33.0 41.0 22 37.68408700844779 39.0 35.0 41.0 34.0 41.0 23 37.56750295442872 39.0 35.0 41.0 33.0 41.0 24 37.4854053309169 39.0 35.0 41.0 33.0 41.0 25 37.41762050519687 39.0 35.0 41.0 33.0 41.0 26 37.40452914966739 39.0 35.0 41.0 33.0 41.0 27 37.3289083020491 39.0 35.0 41.0 33.0 41.0 28 37.31352021747936 39.0 35.0 41.0 33.0 41.0 29 37.17293534498958 39.0 35.0 41.0 33.0 41.0 30 36.97779063018069 39.0 35.0 41.0 32.0 41.0 31 36.751894801458214 39.0 35.0 40.0 31.0 41.0 32 36.5925727958709 39.0 35.0 41.0 31.0 41.0 33 36.21828321592176 39.0 35.0 41.0 30.0 41.0 34 36.013790813919016 39.0 35.0 41.0 29.0 41.0 35 35.845559587590984 39.0 35.0 41.0 27.0 41.0 36 35.54485094228529 39.0 35.0 40.0 25.0 41.0 37 35.39333155162838 38.0 35.0 40.0 25.0 41.0 38 35.38497772172831 38.0 35.0 40.0 25.0 41.0 39 35.427358636327575 39.0 35.0 40.0 25.0 41.0 40 35.33059117805496 39.0 35.0 40.0 24.0 41.0 41 35.13379490627258 38.0 35.0 40.0 23.0 41.0 42 34.7371602406972 38.0 34.0 40.0 22.0 41.0 43 34.575299305552655 38.0 34.0 40.0 22.0 41.0 44 34.60008518776804 38.0 34.0 40.0 22.0 41.0 45 34.60951221651056 38.0 34.0 40.0 22.0 41.0 46 34.354750679623 38.0 34.0 40.0 20.0 41.0 47 34.24384581013985 38.0 33.0 40.0 21.0 41.0 48 34.12341786688158 37.0 33.0 40.0 21.0 41.0 49 34.14340358540282 37.0 33.0 40.0 21.0 41.0 50 33.97762568327689 37.0 33.0 40.0 20.0 41.0 51 32.968891849117426 36.0 31.0 39.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 5.0 11 4.0 12 14.0 13 13.0 14 11.0 15 28.0 16 36.0 17 58.0 18 116.0 19 222.0 20 412.0 21 623.0 22 1050.0 23 1697.0 24 2920.0 25 5477.0 26 8385.0 27 9465.0 28 9278.0 29 9150.0 30 9929.0 31 11285.0 32 13792.0 33 17965.0 34 26565.0 35 35335.0 36 48434.0 37 62821.0 38 104100.0 39 99691.0 40 54.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.385382781213593 5.0106275916499285 47.48508170091577 25.118907926220714 2 30.57217784199339 4.927945346200584 47.69679835971788 16.803078452088144 3 19.102104221387975 4.768844661775329 56.88475848850174 19.244292628334954 4 15.650955648074296 5.093727424197502 57.91431947918537 21.34099744854283 5 14.569613857210268 6.070463646955164 57.116310534469726 22.24361196136484 6 18.44628368361931 7.121739166746704 60.278906422907156 14.153070726726828 7 71.07708240246208 2.7151513126850433 21.126148886504005 5.081617398348861 8 70.79416714341194 3.4419616571526404 19.81993644324365 5.943934756191773 9 64.06475105545138 7.243257012331347 22.488318000927045 6.203673931290219 10 28.764443293759996 30.152294014724124 27.557616579878147 13.525646111637734 11 18.29094128307812 19.853552204651084 40.20946168847167 21.646044823799123 12 17.57707613865562 17.369326557286684 44.034350714700324 21.019246589357376 13 21.158094299518524 18.864079575397437 43.95981141766644 16.0180147074176 14 17.59607635162504 21.18377590605961 42.87972238809709 18.340425354218258 15 13.758242125351295 20.891047350201067 44.788513014101916 20.56219751034572 16 14.836869600076835 21.02133452484852 41.27723189864326 22.864563976431384 17 15.217709033661697 20.672440504278182 39.87058975825883 24.239260703801296 18 15.808594777655749 19.520944080911676 43.06659261455458 21.603868526877992 19 16.23119292106351 22.239644883931668 42.412651218727945 19.116510976276878 20 16.115521294854073 25.59934188273319 39.7607643514246 18.524372470988137 21 15.579965841375365 25.919213599976615 39.94763457788208 18.55318598076594 22 14.00211299071704 23.943191451156924 38.81284163844474 23.241853919681297 23 12.979233393605071 24.893410893177045 37.310363259016746 24.816992454201134 24 14.202972384965193 24.587528343724294 37.56926725991874 23.640232011391777 25 14.282313933628707 26.36561420798343 35.19444943229034 24.15762242609752 26 14.262896133561057 26.981763971420342 36.11773450647468 22.637605388543918 27 15.019355162002915 26.227601672018743 38.37166086916579 20.381382296812557 28 13.57032793114824 24.475197414300688 37.79204997682392 24.162424677727156 29 15.811726680892468 22.983993886524882 36.4000233848775 24.80425604770515 30 20.692484684993172 25.109303422961442 34.280351274267026 19.917860617778352 31 19.93477289525663 30.063765549899568 29.55514446425663 20.44631709058717 32 18.757386071799925 29.432165063828187 28.57694668665517 23.233502177716716 33 19.979037127668903 26.35392176923302 29.620288051580356 24.04675305151772 34 20.824651001582655 24.52071440800765 30.169623879300627 24.48501071110907 35 23.000279783355815 24.2336232779752 28.648562874001442 24.117534064667538 36 23.2174250744349 29.289559069782978 29.523616638340343 17.96939921744178 37 20.330645464377735 32.482847609940244 28.77613573251041 18.410371193171613 38 19.302337234988787 28.157898033582356 29.69816804540007 22.84159668602879 39 20.75157325939258 22.006631283119876 33.822258227509806 23.419537229977745 40 26.940005261597438 20.88102525984357 32.77327943675852 19.40569004180047 41 28.123655891527577 23.001741338199615 29.048402520555726 19.826200249717086 42 24.619056169640583 24.483966743363496 32.797499488455806 18.099477598540116 43 19.836848720721925 24.392932755949573 36.176823080874094 19.59339544245441 44 19.538065151939065 23.433108810670188 32.707300675238336 24.32152536215241 45 23.330173590956736 21.30717289358628 30.543364332215596 24.819289183241395 46 25.473021785518913 22.22419416129719 32.93342408892935 19.369359964254546 47 20.706891439882074 25.482208701679955 34.98043604444797 18.830463813990004 48 19.242831073491153 24.381031523650044 36.29395626192733 20.08218114093147 49 22.472449691194342 19.968597450213178 37.165669329480394 20.393283529112086 50 21.868409953606076 18.705605271619525 33.90368771166446 25.52229706310994 51 20.05399401180101 18.252732063590162 32.23542725423955 29.45784667036927 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 786.0 1 1353.5 2 1921.0 3 11774.5 4 21628.0 5 13507.0 6 5386.0 7 5173.0 8 4960.0 9 5176.0 10 5392.0 11 5307.5 12 5223.0 13 5134.5 14 5046.0 15 4648.0 16 4250.0 17 3923.5 18 3597.0 19 3479.5 20 3362.0 21 3189.0 22 3016.0 23 3033.0 24 3050.0 25 3157.5 26 3538.5 27 3812.0 28 4394.5 29 4977.0 30 5660.5 31 6344.0 32 6711.5 33 7079.0 34 8229.5 35 9380.0 36 10232.0 37 11084.0 38 12274.0 39 13464.0 40 16637.0 41 19810.0 42 23149.0 43 26488.0 44 30464.5 45 34441.0 46 41952.0 47 49463.0 48 56151.0 49 62839.0 50 59363.5 51 55888.0 52 45665.0 53 35442.0 54 27808.0 55 20174.0 56 16555.5 57 12937.0 58 11410.0 59 9883.0 60 8515.0 61 7147.0 62 6332.0 63 5517.0 64 4959.0 65 4401.0 66 3677.0 67 2953.0 68 2310.5 69 1668.0 70 1430.0 71 1192.0 72 1010.5 73 829.0 74 617.5 75 328.5 76 251.0 77 184.5 78 118.0 79 84.5 80 51.0 81 33.0 82 15.0 83 9.0 84 3.0 85 3.0 86 3.0 87 1.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 478942.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.547414165821614 #Duplication Level Percentage of deduplicated Percentage of total 1 72.68485101839337 32.3792216189741 2 11.16495838533664 9.947400506715082 3 5.135949276804555 6.863797787053937 4 2.9365111149093073 5.23255907353614 5 1.9223383872365898 4.281760215154296 6 1.3499139410527716 3.6081105252176586 7 0.9350907309259138 2.915911185122428 8 0.6955866970620117 2.478927094580586 9 0.5442909699395395 2.1822079738152085 >10 2.487045140163756 17.975889361462034 >50 0.09249674435032114 2.84734322032164 >100 0.04530452784467793 3.473195314724889 >500 0.002359610825243642 0.56866977339936 >1k 0.0028315329902923706 2.0493134754517413 >5k 0.0 0.0 >10k+ 4.7192216504872837E-4 3.1956928744708577 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15201 3.173870740089614 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCC 3117 0.6508094925899169 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGC 1573 0.32843225275711885 No Hit CTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGCT 1452 0.3031682333142635 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC 1364 0.28479440099218695 No Hit TCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC 1123 0.23447515565559085 No Hit GCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTGC 1119 0.23363998145913284 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 577 0.12047387783907029 No Hit TCCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCTG 538 0.11233092942360454 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 538 0.11233092942360454 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCG 536 0.11191334232537552 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 516 0.10773747134308538 No Hit TTCCTGTCTCTTATACACATCTGACGCGAACTGGTTCGTATGCCGTCTTCT 484 0.10105607777142118 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.175870982290131E-4 0.0 0.0 0.32905863340446234 0.0 2 4.175870982290131E-4 0.0 0.0 1.1700790492376947 0.0 3 4.175870982290131E-4 0.0 0.0 1.722546780194679 0.0 4 4.175870982290131E-4 0.0 0.0 2.541643873370888 0.0 5 4.175870982290131E-4 0.0 0.0 4.236421111533338 0.0 6 4.175870982290131E-4 0.0 0.0 5.884637388243253 0.0 7 4.175870982290131E-4 0.0 0.0 7.550183529529671 0.0 8 4.175870982290131E-4 0.0 0.0 10.098091209373996 0.0 9 4.175870982290131E-4 0.0 0.0 11.533338065987113 0.0 10 4.175870982290131E-4 0.0 0.0 13.990002964868397 0.0 11 4.175870982290131E-4 0.0 0.0 19.378338086866467 0.0 12 4.175870982290131E-4 0.0 0.0 24.13757824538253 0.0 13 4.175870982290131E-4 0.0 0.0 25.7016507217993 0.0 14 4.175870982290131E-4 0.0 0.0 26.342646917580833 0.0 15 4.175870982290131E-4 0.0 0.0 27.1193589202868 0.0 16 4.175870982290131E-4 0.0 0.0 28.96154440412409 0.0 17 6.263806473435197E-4 0.0 0.0 31.505067419437008 0.0 18 6.263806473435197E-4 0.0 0.0 33.871324711551715 0.0 19 6.263806473435197E-4 0.0 0.0 35.31575848432587 0.0 20 6.263806473435197E-4 0.0 0.0 36.58584964358941 0.0 21 6.263806473435197E-4 0.0 0.0 38.046778106743616 0.0 22 6.263806473435197E-4 0.0 0.0 39.42794743413607 0.0 23 6.263806473435197E-4 0.0 0.0 40.53580600573765 0.0 24 8.351741964580262E-4 0.0 0.0 41.13420831749982 0.0 25 8.351741964580262E-4 0.0 0.0 41.55910318994784 0.0 26 8.351741964580262E-4 0.0 0.0 41.89024975884345 0.0 27 8.351741964580262E-4 0.0 0.0 42.189242121175425 0.0 28 8.351741964580262E-4 0.0 0.0 42.46902547698886 0.0 29 8.351741964580262E-4 0.0 0.0 42.74254502632887 0.0 30 0.0010439677455725328 0.0 0.0 43.02775701441928 0.0 31 0.0010439677455725328 0.0 0.0 43.263693724918674 0.0 32 0.0010439677455725328 0.0 0.0 43.47979504825219 0.0 33 0.0010439677455725328 0.0 0.0 43.677313745714514 0.0 34 0.0010439677455725328 0.0 0.0 43.88172263029762 0.0 35 0.0010439677455725328 0.0 0.0 44.10408776010456 0.0 36 0.0010439677455725328 0.0 0.0 44.30202404466512 0.0 37 0.0010439677455725328 0.0 0.0 44.48931185822083 0.0 38 0.0010439677455725328 0.0 0.0 44.7077099105946 0.0 39 0.0010439677455725328 0.0 0.0 45.09272521516175 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGGCAT 25 3.887385E-5 45.000004 21 TAACCCG 30 2.1628402E-6 45.000004 37 TCTCGCG 20 7.029159E-4 45.000004 1 AATTCCG 30 2.1628402E-6 45.000004 11 CCTGGCG 20 7.029159E-4 45.000004 4 GTTCAAG 35 1.2099372E-7 45.0 10 CGTTTTT 5450 0.0 43.96789 1 ATGGGAC 125 0.0 43.2 5 GGATACT 50 1.0786607E-9 40.500004 8 TGGGCAA 100 0.0 40.500004 6 CGCAGGG 45 1.9243089E-8 40.000004 3 GTTTTTT 6440 0.0 39.444878 2 AGCGTTC 40 3.4525874E-7 39.375004 7 CGTTCAA 40 3.4525874E-7 39.375004 9 CTACGGG 40 3.4525874E-7 39.375004 3 AAAGCGT 40 3.4525874E-7 39.375004 5 TTTGGGA 3225 0.0 39.139534 4 CGTAGGG 75 0.0 39.0 3 CGAACGA 35 6.24066E-6 38.571426 22 TCCGATA 35 6.24066E-6 38.571426 14 >>END_MODULE