##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933719.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 403010 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1283814297412 33.0 31.0 34.0 30.0 34.0 2 32.36122676856654 34.0 31.0 34.0 30.0 34.0 3 32.47324880275924 34.0 31.0 34.0 31.0 34.0 4 35.96604054489963 37.0 35.0 37.0 35.0 37.0 5 36.05562889258331 37.0 35.0 37.0 35.0 37.0 6 36.058152403166176 37.0 35.0 37.0 35.0 37.0 7 36.0629761048113 37.0 35.0 37.0 35.0 37.0 8 35.960844644053495 37.0 35.0 37.0 35.0 37.0 9 37.80534974318255 39.0 38.0 39.0 35.0 39.0 10 37.316019453611574 39.0 37.0 39.0 34.0 39.0 11 37.21085829135753 39.0 37.0 39.0 34.0 39.0 12 37.28103272871641 39.0 37.0 39.0 34.0 39.0 13 37.29347410734225 39.0 37.0 39.0 34.0 39.0 14 38.4314359445175 40.0 38.0 41.0 34.0 41.0 15 38.47432321778616 40.0 38.0 41.0 34.0 41.0 16 38.604858440237216 40.0 38.0 41.0 34.0 41.0 17 38.629897521153325 40.0 38.0 41.0 34.0 41.0 18 38.41067219175703 39.0 38.0 41.0 35.0 41.0 19 38.1414332150567 39.0 37.0 41.0 34.0 41.0 20 37.678618396565845 39.0 35.0 41.0 34.0 41.0 21 37.613828440981614 39.0 35.0 41.0 34.0 41.0 22 37.62748318900275 39.0 35.0 41.0 34.0 41.0 23 37.51201955286469 39.0 35.0 41.0 34.0 41.0 24 37.43811816083968 39.0 35.0 41.0 33.0 41.0 25 37.37323887744721 39.0 35.0 41.0 33.0 41.0 26 37.338559837224885 39.0 35.0 41.0 33.0 41.0 27 37.28133048807722 39.0 35.0 41.0 33.0 41.0 28 37.236932086052455 39.0 35.0 41.0 33.0 41.0 29 37.07984913525719 39.0 35.0 41.0 33.0 41.0 30 36.87972506885685 39.0 35.0 41.0 33.0 41.0 31 36.53429691570929 39.0 35.0 41.0 31.0 41.0 32 36.10876653184784 39.0 35.0 41.0 30.0 41.0 33 35.57534304359693 39.0 35.0 41.0 25.0 41.0 34 35.1413612565445 39.0 35.0 41.0 22.0 41.0 35 34.741579613409094 38.0 35.0 41.0 19.0 41.0 36 34.55508051909382 38.0 35.0 41.0 18.0 41.0 37 34.47392868663309 38.0 35.0 41.0 18.0 41.0 38 34.31990521327014 38.0 34.0 40.0 17.0 41.0 39 34.348686136820426 38.0 34.0 40.0 17.0 41.0 40 34.181648098062084 38.0 34.0 40.0 15.0 41.0 41 33.89060321083844 38.0 33.0 40.0 15.0 41.0 42 33.679794546041045 38.0 33.0 40.0 15.0 41.0 43 33.733130691546116 38.0 33.0 40.0 15.0 41.0 44 33.660266494627926 38.0 33.0 40.0 12.0 41.0 45 33.660832237413466 38.0 33.0 40.0 12.0 41.0 46 33.418361827249946 38.0 33.0 40.0 12.0 41.0 47 33.33673109848391 37.0 33.0 40.0 12.0 41.0 48 33.225230143172624 37.0 33.0 40.0 10.0 41.0 49 33.23655492419543 37.0 33.0 40.0 10.0 41.0 50 33.05546016227885 37.0 33.0 40.0 10.0 41.0 51 32.2248902012357 36.0 31.0 40.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 3.0 11 5.0 12 6.0 13 7.0 14 9.0 15 20.0 16 22.0 17 44.0 18 103.0 19 246.0 20 410.0 21 650.0 22 1136.0 23 1995.0 24 3677.0 25 7100.0 26 10674.0 27 11639.0 28 10131.0 29 8777.0 30 8511.0 31 9054.0 32 10496.0 33 13564.0 34 20158.0 35 27108.0 36 36835.0 37 45954.0 38 81553.0 39 93072.0 40 48.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.73000669958562 4.47135306816208 45.187712463710575 29.61092776854172 2 35.815984715019475 4.053745564626188 44.017021910126296 16.113247810228035 3 17.80923550284112 4.301630232500434 60.74514280042679 17.143991464231657 4 13.976079998014937 4.397409493560954 61.493263194461676 20.133247313962432 5 13.175851715838316 5.232872633433414 61.703431676633336 19.887843974094935 6 17.14969851864718 6.00059551872162 63.099923078831786 13.74978288379941 7 67.61370685590929 1.672166943748294 26.395374804595416 4.318751395747004 8 68.19930026550209 2.006898091858763 24.930150616610007 4.863651026029131 9 62.84831641894743 4.989950621572666 27.10776407533312 5.053968884146796 10 26.771792263219275 28.439740949356096 32.19622341877373 12.592243368650902 11 18.22560234237364 20.639934492940622 42.506637552418056 18.627825612267685 12 16.717947445472817 19.41763231681596 45.22939877422397 18.63502146348726 13 19.013423984516514 19.96774273591226 46.5261407905511 14.492692489020124 14 16.754174834371355 22.24833130691546 45.154710801220816 15.84278305749237 15 13.725465869333267 21.20791047368552 47.11347112974864 17.953152527232575 16 14.748765539316642 21.910622565196896 44.29393811567951 19.04667377980695 17 15.054961415349494 21.253318776209028 42.79695292920771 20.894766879233767 18 16.269571474653237 19.33351529738716 45.512022034192704 18.884891193766904 19 15.612019552864693 22.42425746259398 44.577057641249596 17.386665343291728 20 16.410759038237266 25.0519838217414 42.52276618446192 16.014490955559417 21 15.635840301729488 25.606064365648496 42.93739609438972 15.820699238232303 22 14.345797871020572 23.168159599017393 42.225503089253365 20.260539440708666 23 13.564179548894566 25.008560581623286 40.32083571127267 21.106424158209474 24 13.704622714076573 24.724696657651172 41.52452792734672 20.046152700925536 25 13.759956328627082 27.185925907545716 38.41269447408253 20.64142328974467 26 13.949033522741372 27.53231929728791 39.48239497779211 19.036252202178606 27 15.020967221657031 25.710280141931964 41.01957767797325 18.249174958437756 28 12.678345450485098 25.147266817200563 40.73496935559911 21.43941837671522 29 14.78300786580978 24.69417632316816 39.3657725614749 21.157043249547158 30 20.30718840723555 24.45720949852361 37.69037989131783 17.545222202923007 31 19.205726905039576 27.900548373489492 34.21081362745341 18.68291109401752 32 17.043497679958314 28.988362571648345 33.74730155579266 20.22083819260068 33 20.65308553137639 25.281010396764348 32.93615543038634 21.12974864147292 34 19.291084588471747 25.43733406118955 33.00464008337262 22.266941266966082 35 18.49433016550458 29.117391627999307 32.211111386814224 20.177166819681894 36 22.774372844346296 28.490608173494454 31.336939530036474 17.398079452122776 37 20.900473933649288 27.49013672117317 31.759013423984516 19.850375921193024 38 18.805984963152277 28.883402396962854 32.13369395300365 20.17691868688122 39 22.9138234783256 26.157167315947493 32.10416614972333 18.824843056003573 40 26.055681000471452 24.513287511476143 32.35552467680703 17.07550681124538 41 21.445621696732093 25.479764770104964 34.04282772139649 19.031785811766458 42 20.279645666360636 24.900622813329694 37.18865536835314 17.631076151956528 43 19.088111957519665 24.64380536463115 37.12091511376889 19.147167564080295 44 19.85781990521327 25.740552343614304 32.14560432743605 22.256023423736384 45 23.01406912979827 24.000645145281755 30.646137812957498 22.33914791196248 46 23.91627999305228 23.999900746879728 33.25227661844619 18.831542641621795 47 18.342472891491525 26.555916726632095 36.875759906702065 18.225850475174312 48 17.61792511352076 25.741296742016328 37.61246619190591 19.028311952557008 49 21.40939430783355 22.104414282524008 37.25813255254212 19.22805885710032 50 19.89007716930101 22.05925411280117 34.76117217935039 23.28949653854743 51 18.56207042008883 20.994019999503735 33.20463512071661 27.239274459690826 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 472.0 1 1037.5 2 1603.0 3 13075.5 4 24548.0 5 15521.5 6 6495.0 7 6317.0 8 6139.0 9 6351.5 10 6564.0 11 6613.0 12 6662.0 13 6449.5 14 6237.0 15 5776.5 16 5316.0 17 4973.0 18 4630.0 19 4411.0 20 4192.0 21 3889.0 22 3586.0 23 3628.0 24 3670.0 25 3716.5 26 4077.5 27 4392.0 28 4590.0 29 4788.0 30 5324.5 31 5861.0 32 6559.0 33 7257.0 34 8029.5 35 8802.0 36 9717.5 37 10633.0 38 11718.0 39 12803.0 40 14814.5 41 16826.0 42 18929.0 43 21032.0 44 24143.0 45 27254.0 46 32343.0 47 37432.0 48 42557.5 49 47683.0 50 44651.0 51 41619.0 52 34091.0 53 26563.0 54 21030.0 55 15497.0 56 12863.5 57 10230.0 58 8533.5 59 6837.0 60 5975.0 61 5113.0 62 4104.5 63 3096.0 64 2540.0 65 1984.0 66 1617.0 67 1250.0 68 944.0 69 638.0 70 528.5 71 419.0 72 386.0 73 353.0 74 350.5 75 309.5 76 271.0 77 179.5 78 88.0 79 70.0 80 52.0 81 27.5 82 3.0 83 4.0 84 5.0 85 3.0 86 1.0 87 0.5 88 0.0 89 0.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 403010.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.80526672276712 #Duplication Level Percentage of deduplicated Percentage of total 1 75.38076270038849 36.03597466657686 2 10.566081278190135 10.10228667436631 3 4.6255508317890595 6.6337707376018 4 2.6614587906991347 5.089269894441015 5 1.714169695613151 4.09731697534356 6 1.1190169837886006 3.209694322639225 7 0.7616977696328923 2.548921552760607 8 0.6025495348804554 2.3044032982911555 9 0.4235667122917306 1.8223847690392572 >10 2.020877682155091 15.869282289105044 >50 0.0819751228138386 2.6638145440696324 >100 0.038115821435732576 3.2439030935839606 >500 0.002088538160862059 0.7413351945171102 >1k 0.0015664036206465442 1.3875698135759649 >5k 0.0 0.0 >10k+ 5.221345402155147E-4 4.250072174088496 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17027 4.224957197091884 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCC 2859 0.7094116771295997 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGC 1517 0.3764174586238555 No Hit CTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGCT 1183 0.2935411031984318 TruSeq Adapter, Index 21 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGC 978 0.24267387906007293 TruSeq Adapter, Index 14 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGC 820 0.20346889655343542 TruSeq Adapter, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCGTCTTCTGC 617 0.1530979380164264 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTCTGTCTCTTATACACATCTGACGCAGCAGGTTTCGTATGCCG 555 0.13771370437458128 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 470 0.11662241631721297 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.481328006749212E-4 0.0 0.0 0.4342324011811121 0.0 2 2.481328006749212E-4 0.0 0.0 1.3282548820128532 0.0 3 2.481328006749212E-4 0.0 0.0 1.908637502791494 0.0 4 2.481328006749212E-4 0.0 0.0 2.7349197290389817 0.0 5 2.481328006749212E-4 0.0 0.0 4.358452643854991 0.0 6 2.481328006749212E-4 0.0 0.0 5.807796332597206 0.0 7 2.481328006749212E-4 0.0 0.0 7.191384829160567 0.0 8 2.481328006749212E-4 0.0 0.0 9.266271308404258 0.0 9 2.481328006749212E-4 0.0 0.0 10.295278032803155 0.0 10 4.962656013498424E-4 0.0 0.0 12.28108483660455 0.0 11 4.962656013498424E-4 0.0 0.0 16.601573161956278 0.0 12 4.962656013498424E-4 0.0 0.0 20.266742760725542 0.0 13 4.962656013498424E-4 0.0 0.0 21.481104687228605 0.0 14 4.962656013498424E-4 0.0 0.0 21.937917173271135 0.0 15 4.962656013498424E-4 0.0 0.0 22.520532989255848 0.0 16 4.962656013498424E-4 0.0 0.0 23.851517332076128 0.0 17 4.962656013498424E-4 0.0 0.0 25.802337410982357 0.0 18 4.962656013498424E-4 0.0 0.0 27.593856231855288 0.0 19 4.962656013498424E-4 0.0 0.0 28.689114414034393 0.0 20 4.962656013498424E-4 0.0 0.0 29.648395821443636 0.0 21 4.962656013498424E-4 0.0 0.0 30.821071437433314 0.0 22 4.962656013498424E-4 0.0 0.0 31.846108037021413 0.0 23 4.962656013498424E-4 0.0 0.0 32.65129897521153 0.0 24 7.443984020247637E-4 0.0 0.0 33.12250316369321 0.0 25 7.443984020247637E-4 0.0 0.0 33.4688965534354 0.0 26 7.443984020247637E-4 0.0 0.0 33.74779782139401 0.0 27 7.443984020247637E-4 0.0 0.0 33.99593062206893 0.0 28 7.443984020247637E-4 0.0 0.0 34.235130641919554 0.0 29 7.443984020247637E-4 0.0 0.0 34.476563856976256 0.0 30 7.443984020247637E-4 0.0 0.0 34.751743132924744 0.0 31 7.443984020247637E-4 0.0 0.0 34.96538547430585 0.0 32 7.443984020247637E-4 0.0 0.0 35.21500707178482 0.0 33 7.443984020247637E-4 0.0 0.0 35.4269124835612 0.0 34 9.925312026996848E-4 0.0 0.0 35.62790005210789 0.0 35 9.925312026996848E-4 0.0 0.0 35.84600878390114 0.0 36 9.925312026996848E-4 0.0 0.0 36.03210838440734 0.0 37 9.925312026996848E-4 0.0 0.0 36.24624699138979 0.0 38 0.0012406640033746062 0.0 0.0 36.48519887843974 0.0 39 0.0012406640033746062 0.0 0.0 36.889903476340535 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCTACG 35 1.2093005E-7 45.000004 9 GTGTTCG 20 7.027829E-4 45.0 1 GCAACGA 25 3.8862825E-5 45.0 9 CTACGGG 20 7.027829E-4 45.0 3 ATAGTAC 20 7.027829E-4 45.0 10 CAATCGG 25 3.8862825E-5 45.0 20 AGTACGG 20 7.027829E-4 45.0 2 ACGACGC 25 3.8862825E-5 45.0 12 CGCGCAA 30 2.1619799E-6 44.999996 16 TATTGCG 30 2.1619799E-6 44.999996 1 GTCTTCG 30 2.1619799E-6 44.999996 1 AAGCTAC 30 2.1619799E-6 44.999996 8 ACGCGCA 30 2.1619799E-6 44.999996 15 CGTTTTT 7125 0.0 44.652634 1 CGCTTGG 90 0.0 42.500004 2 GCGTTTG 55 6.002665E-11 40.909092 1 TCTTTCG 55 6.002665E-11 40.909092 1 GCGATGC 95 0.0 40.263157 9 GTTTGCG 90 0.0 40.000004 1 TTGTGCG 45 1.9230356E-8 40.000004 1 >>END_MODULE