##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933718.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 127863 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.02739651032746 33.0 31.0 34.0 30.0 34.0 2 32.235118838131434 34.0 31.0 34.0 30.0 34.0 3 32.342280409500795 34.0 31.0 34.0 30.0 34.0 4 35.93745649640631 37.0 35.0 37.0 35.0 37.0 5 35.94645049779842 37.0 35.0 37.0 35.0 37.0 6 35.903998811227645 37.0 35.0 37.0 35.0 37.0 7 35.96005881294823 37.0 35.0 37.0 35.0 37.0 8 35.79188662865724 37.0 35.0 37.0 35.0 37.0 9 37.59681846976842 39.0 37.0 39.0 35.0 39.0 10 37.06885494630972 39.0 37.0 39.0 33.0 39.0 11 37.071998936361574 39.0 37.0 39.0 33.0 39.0 12 37.12428927836825 39.0 37.0 39.0 34.0 39.0 13 37.04943572417353 39.0 37.0 39.0 33.0 39.0 14 37.968231622908895 40.0 37.0 41.0 33.0 41.0 15 38.05760071326341 40.0 37.0 41.0 33.0 41.0 16 38.172989840688864 40.0 37.0 41.0 33.0 41.0 17 38.18748973510711 40.0 37.0 41.0 33.0 41.0 18 37.95726676208129 39.0 37.0 40.0 33.0 41.0 19 37.679516357351226 39.0 37.0 40.0 34.0 41.0 20 37.23062965830616 39.0 35.0 40.0 33.0 41.0 21 37.10108475477659 39.0 35.0 40.0 33.0 41.0 22 37.12875499558121 39.0 35.0 40.0 33.0 41.0 23 37.097260348967254 38.0 35.0 40.0 33.0 41.0 24 36.978171949664876 38.0 35.0 40.0 33.0 41.0 25 36.878534055981795 38.0 35.0 40.0 32.0 41.0 26 36.80840430773562 38.0 35.0 40.0 32.0 41.0 27 36.738313663843336 38.0 35.0 40.0 32.0 41.0 28 36.61043460578901 38.0 35.0 40.0 32.0 41.0 29 36.508161078654496 38.0 35.0 40.0 32.0 41.0 30 36.39728459366666 38.0 35.0 40.0 31.0 41.0 31 36.08453579221511 38.0 35.0 40.0 30.0 41.0 32 35.72233562484847 38.0 35.0 40.0 30.0 41.0 33 35.37079530434919 38.0 35.0 40.0 27.0 41.0 34 35.03901832430023 38.0 35.0 40.0 24.0 41.0 35 34.73754721850731 38.0 34.0 40.0 23.0 41.0 36 34.603575702118675 38.0 34.0 40.0 21.0 41.0 37 34.47096501724502 38.0 34.0 40.0 21.0 41.0 38 34.372461149824424 38.0 34.0 40.0 20.0 41.0 39 34.34121677107529 38.0 34.0 40.0 20.0 41.0 40 34.15694141385702 38.0 34.0 40.0 18.0 41.0 41 33.99904585376536 38.0 33.0 40.0 18.0 41.0 42 33.93195842425096 38.0 33.0 40.0 18.0 41.0 43 33.84316807833384 38.0 33.0 40.0 17.0 41.0 44 33.692170526266395 37.0 33.0 40.0 16.0 41.0 45 33.73358985789478 37.0 33.0 40.0 17.0 41.0 46 33.48608276045455 37.0 33.0 40.0 16.0 41.0 47 33.303950321828836 37.0 33.0 40.0 15.0 41.0 48 33.28007320335046 37.0 33.0 40.0 15.0 41.0 49 33.357750091895234 37.0 33.0 40.0 15.0 41.0 50 33.3038955757334 37.0 33.0 40.0 15.0 41.0 51 32.19069629212517 35.0 31.0 39.0 12.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 3.0 12 2.0 13 2.0 14 0.0 15 9.0 16 10.0 17 20.0 18 51.0 19 79.0 20 144.0 21 220.0 22 362.0 23 589.0 24 1057.0 25 1923.0 26 2747.0 27 3058.0 28 3149.0 29 2905.0 30 3014.0 31 3408.0 32 4047.0 33 5443.0 34 7979.0 35 10533.0 36 13880.0 37 16992.0 38 26285.0 39 19944.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.72559692796196 5.306460821347849 43.509068299664484 29.458873951025705 2 34.753603466209924 4.910724760094789 42.97177447737031 17.363897296324975 3 17.955155126971835 4.938879894887497 58.109069863838634 18.996895114302028 4 15.035624066383551 5.140658360901903 58.34526016126635 21.47845741144819 5 13.37290693945864 6.183962522387242 58.66044125352917 21.78268928462495 6 17.474953661340653 7.210842855243503 61.755159819494295 13.55904366392154 7 64.68955053455652 2.71775259457388 27.106356021679456 5.486340849190149 8 63.97472294565277 3.030587425603967 26.174108225209796 6.8205814035334695 9 58.11845490876954 5.601307649593705 29.174194254788326 7.1060431868484235 10 28.623604952175373 21.38538904921674 35.074259168015764 14.916746830592118 11 18.8936596200621 18.06777566614267 41.298890218436924 21.73967449535831 12 17.136309956750583 16.17434285133307 46.9166216966597 19.77272549525664 13 20.406998115170143 16.7382276342648 47.90361558855963 14.95115866200543 14 16.62326083386124 19.09074556361105 47.241187833853424 17.044805768674284 15 12.81840720145781 18.467422162783603 49.037641851043695 19.67652878471489 16 13.814004051211063 18.915558058234204 45.10061550253005 22.16982238802468 17 13.917239545450991 19.433299703588997 42.66050382049537 23.98895693046464 18 14.883117086256384 18.153023157598366 46.344133955874646 20.6197258002706 19 15.226453313311906 20.647098847985735 45.73175977413325 18.39468806456911 20 14.577321038924474 24.61540867960239 42.95691482289638 17.850355458576757 21 14.102594182836317 24.312740980580777 44.34902982098027 17.23563501560264 22 12.207597193871566 22.746220564197618 42.38129873380102 22.664883508129797 23 12.148940663053425 23.36250518132689 40.79444405340091 23.694110102218783 24 14.00405121106184 23.00039886440956 40.29390832375277 22.70164160077583 25 13.474578259543419 24.740542612014423 37.71927766437515 24.06560146406701 26 12.622885432064008 25.786193034732484 39.66980283584775 21.921118697355762 27 14.243369856799855 24.128168430273025 42.49079092466155 19.137670788265567 28 11.662482500801639 23.56350156026372 40.62394907048951 24.150066868445133 29 13.919585806683715 22.96676912007383 39.339762089111005 23.773882984131454 30 19.646809475767032 23.429764669998356 38.00317527353496 18.920250580699655 31 16.751523114583577 29.110845201504738 33.11434895161227 21.023282732299414 32 15.80128731532969 28.832422201887958 31.473530262859466 23.892760219922888 33 18.842041872942133 23.465740675566817 32.19696080961654 25.49525664187451 34 16.63499214002487 24.817187145616792 31.562688189703042 26.9851325246553 35 15.361754377732417 28.370208739041004 30.414584359822623 25.85345252340396 36 17.865997200128263 28.268537418956225 32.87581239295183 20.98965298796368 37 15.195951917286472 29.96175594190657 32.2172950736335 22.624997067173457 38 17.23719918975779 28.01279494458913 28.579808075831163 26.17019778982192 39 22.21127300313617 21.442481405879732 27.944753368840086 28.401492222144014 40 21.471418627750012 22.660190985664343 29.691935900143125 26.17645448644252 41 16.25098738493544 28.223958455534436 28.3576953457998 27.16735881373032 42 16.42539280323471 27.322212055090212 31.500121223497025 24.75227391817805 43 16.715547109015116 23.117711926045846 35.14230074376481 25.024440221174228 44 18.637917145695003 22.10178081227564 32.290811258925565 26.96949078310379 45 22.018879582052666 19.639770692068854 30.770433980119343 27.570915745759134 46 21.646606133126863 21.846038337908542 33.714209740112466 22.793145788852133 47 15.416500473162682 25.859709220024556 35.9220415601073 22.801748746705456 48 15.867764716923583 24.20246670264267 35.97131304599454 23.958455534439203 49 20.373368370834406 19.54748441691498 36.81674917685335 23.26239803539726 50 18.931981886863284 17.978617739299093 34.61048153101366 28.47891884282396 51 17.249712582998992 18.300055528182508 31.98501521159366 32.46521667722484 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 379.0 1 587.5 2 796.0 3 4908.0 4 9020.0 5 5428.0 6 1836.0 7 1754.0 8 1672.0 9 1710.5 10 1749.0 11 1709.0 12 1669.0 13 1590.0 14 1511.0 15 1383.0 16 1255.0 17 1193.5 18 1132.0 19 1011.0 20 890.0 21 859.0 22 828.0 23 832.5 24 837.0 25 836.5 26 858.5 27 881.0 28 928.0 29 975.0 30 1092.5 31 1210.0 32 1351.5 33 1493.0 34 1624.0 35 1755.0 36 1879.0 37 2003.0 38 2287.5 39 2572.0 40 3307.5 41 4043.0 42 5051.5 43 6060.0 44 7062.5 45 8065.0 46 10379.5 47 12694.0 48 14930.5 49 17167.0 50 16431.5 51 15696.0 52 12617.5 53 9539.0 54 7536.0 55 5533.0 56 4625.5 57 3718.0 58 3209.0 59 2700.0 60 2418.0 61 2136.0 62 1872.5 63 1609.0 64 1410.5 65 1212.0 66 1025.5 67 839.0 68 713.0 69 587.0 70 478.0 71 369.0 72 313.5 73 258.0 74 201.0 75 128.0 76 112.0 77 78.0 78 44.0 79 31.0 80 18.0 81 17.0 82 16.0 83 9.5 84 3.0 85 1.5 86 0.0 87 0.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 127863.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.31710502647365 #Duplication Level Percentage of deduplicated Percentage of total 1 78.2890325349355 45.65589732760846 2 11.815036343641875 13.780374306875329 3 4.526191561837835 7.9186316604490745 4 2.0465091328487515 4.773859521519126 5 1.0567819113268782 3.081423085646356 6 0.5632593943620418 1.9708594354895475 7 0.36477751253922697 1.4890937957032135 8 0.26017219644341927 1.213799144396737 9 0.1810476624735134 0.9502357992538889 >10 0.823431590805461 8.431680783338418 >50 0.05230265804790388 2.135097721780343 >100 0.01609312555320119 2.14370067963367 >500 0.004023281388300297 1.4679774446086826 >1k 0.0 0.0 >5k 0.0013410937961000993 4.98736929369716 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6377 4.98736929369716 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCC 869 0.6796336704128637 No Hit CTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGCT 505 0.3949539741754847 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGC 503 0.39338980002033425 TruSeq Adapter, Index 16 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGC 463 0.36210631691732553 TruSeq Adapter, Index 16 (95% over 21bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGC 428 0.33473326920219293 No Hit GCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGC 395 0.3089243956422108 TruSeq Adapter, Index 16 (95% over 21bp) AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 269 0.21038142386773342 No Hit TCCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTG 209 0.16345619921322038 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 207 0.16189202505806996 No Hit TTCCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCT 174 0.13608315149808778 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCG 150 0.11731306163628259 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.45126424376090035 0.0 2 0.0 0.0 0.0 1.7229378318982036 0.0 3 0.0 0.0 0.0 2.491729429154642 0.0 4 0.0 0.0 0.0 3.603857253466601 0.0 5 0.0 0.0 0.0 5.9501184861922525 0.0 6 0.0 0.0 0.0 7.815396166209146 0.0 7 0.0 0.0 0.0 9.679109672070888 0.0 8 0.0 0.0 0.0 12.460993407005937 0.0 9 0.0 0.0 0.0 13.799144396737132 0.0 10 0.0 0.0 0.0 16.403494365062606 0.0 11 0.0 0.0 0.0 22.249595269937355 0.0 12 0.0 0.0 0.0 27.022672704378905 0.0 13 0.0 0.0 0.0 28.610309471856596 0.0 14 0.0 0.0 0.0 29.208606086201637 0.0 15 0.0 0.0 0.0 30.003206557018057 0.0 16 0.0 0.0 0.0 31.946692944792474 0.0 17 0.0 0.0 0.0 34.58154430914338 0.0 18 0.0 0.0 0.0 36.865238575663014 0.0 19 0.0 0.0 0.0 38.25266105128145 0.0 20 0.0 0.0 0.0 39.53059133603936 0.0 21 0.0 0.0 0.0 40.90471833133901 0.0 22 0.0 0.0 0.0 42.120863736968474 0.0 23 0.0 0.0 0.0 42.98428787061152 0.0 24 0.0 0.0 0.0 43.4863877744148 0.0 25 0.0 0.0 0.0 43.85084035256485 0.0 26 0.0 0.0 0.0 44.113621610630126 0.0 27 0.0 0.0 0.0 44.375620781617826 0.0 28 0.0 0.0 0.0 44.60007977288191 0.0 29 0.0 0.0 0.0 44.84721928939568 0.0 30 0.0 0.0 0.0 45.0834095868234 0.0 31 0.0 0.0 0.0 45.272674659596596 0.0 32 0.0 0.0 0.0 45.465068080680105 0.0 33 0.0 0.0 0.0 45.6418197602121 0.0 34 0.0 0.0 0.0 45.82248187513198 0.0 35 0.0 0.0 0.0 46.00861859959488 0.0 36 0.0 0.0 0.0 46.17442106004083 0.0 37 0.0 0.0 0.0 46.36290404573645 0.0 38 0.0 0.0 0.0 46.55607955389753 0.0 39 0.0 0.0 0.0 46.93617387359909 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGTG 25 3.871318E-5 45.0 42 TCTCTCG 20 7.009762E-4 45.0 1 CCCTACA 20 7.009762E-4 45.0 27 TCTTCCG 20 7.009762E-4 45.0 1 TTGCTCG 25 3.871318E-5 45.0 1 CGTGAGG 25 3.871318E-5 45.0 45 GGCCGAT 35 1.2006421E-7 45.0 8 TCGGGAC 35 1.2006421E-7 45.0 5 CACGACC 25 3.871318E-5 45.0 27 GCTTGCG 20 7.009762E-4 45.0 1 GGAAGAT 20 7.009762E-4 45.0 8 GCCCTAC 20 7.009762E-4 45.0 26 GTCAAGC 25 3.871318E-5 45.0 16 CGGGACT 20 7.009762E-4 45.0 6 AAACACG 25 3.871318E-5 45.0 40 CGGGACC 35 1.2006421E-7 45.0 6 CTATTGG 25 3.871318E-5 45.0 2 CGAGACA 25 3.871318E-5 45.0 22 TTGCAGG 20 7.009762E-4 45.0 2 GGCTGCG 20 7.009762E-4 45.0 1 >>END_MODULE