##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933716.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 420528 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03195268804931 33.0 31.0 34.0 30.0 34.0 2 32.2283438914888 34.0 31.0 34.0 30.0 34.0 3 32.35888454514325 34.0 31.0 34.0 30.0 34.0 4 35.93212342578853 37.0 35.0 37.0 35.0 37.0 5 35.95125413765552 37.0 35.0 37.0 35.0 37.0 6 35.91039360042613 37.0 35.0 37.0 35.0 37.0 7 35.99267587413918 37.0 35.0 37.0 35.0 37.0 8 35.83435823536126 37.0 35.0 37.0 35.0 37.0 9 37.6575947380436 39.0 37.0 39.0 35.0 39.0 10 36.86542394323327 39.0 37.0 39.0 32.0 39.0 11 36.88800983525473 39.0 37.0 39.0 33.0 39.0 12 37.091266217707265 39.0 37.0 39.0 34.0 39.0 13 37.11350492713922 39.0 37.0 39.0 33.0 39.0 14 38.16016531598372 40.0 37.0 41.0 33.0 41.0 15 38.19874063082601 40.0 37.0 41.0 33.0 41.0 16 38.29147167370544 40.0 38.0 41.0 34.0 41.0 17 38.304521934330175 40.0 38.0 41.0 34.0 41.0 18 38.123390119088384 39.0 38.0 41.0 34.0 41.0 19 37.89219505003234 39.0 37.0 41.0 34.0 41.0 20 37.48935148194651 39.0 35.0 40.0 33.0 41.0 21 37.374983354259406 39.0 35.0 40.0 33.0 41.0 22 37.41547055130693 39.0 35.0 40.0 33.0 41.0 23 37.3495177491154 39.0 35.0 40.0 33.0 41.0 24 37.25792099455922 39.0 35.0 40.0 33.0 41.0 25 37.18051592283986 39.0 35.0 40.0 33.0 41.0 26 37.13484001065327 39.0 35.0 40.0 33.0 41.0 27 37.09167284937032 39.0 35.0 40.0 33.0 41.0 28 37.00846079214701 39.0 35.0 40.0 33.0 41.0 29 36.92028117033824 39.0 35.0 40.0 32.0 41.0 30 36.792993569988205 39.0 35.0 40.0 32.0 41.0 31 36.460937202754636 38.0 35.0 40.0 31.0 41.0 32 36.017722957805425 38.0 35.0 40.0 30.0 41.0 33 35.664604972796106 38.0 35.0 40.0 27.0 41.0 34 35.35863248107142 39.0 35.0 40.0 24.0 41.0 35 34.987772514553136 39.0 35.0 40.0 22.0 41.0 36 34.845256439523645 38.0 35.0 40.0 21.0 41.0 37 34.64803057109158 38.0 35.0 40.0 19.0 41.0 38 34.32857027356086 38.0 34.0 40.0 18.0 41.0 39 34.27080241981509 38.0 34.0 40.0 18.0 41.0 40 34.23413423125214 38.0 33.0 40.0 18.0 41.0 41 33.9284090476734 38.0 33.0 40.0 16.0 41.0 42 33.761219229159536 38.0 33.0 40.0 15.0 41.0 43 33.81254042537001 38.0 33.0 40.0 15.0 41.0 44 33.84992200281551 38.0 33.0 40.0 15.0 41.0 45 33.91182037819122 38.0 33.0 40.0 15.0 41.0 46 33.61927862116197 38.0 33.0 40.0 15.0 41.0 47 33.301366377506376 37.0 32.0 40.0 14.0 41.0 48 33.20217203135106 37.0 32.0 40.0 13.0 41.0 49 33.31841399383632 38.0 33.0 40.0 13.0 41.0 50 33.27850939770955 38.0 32.0 40.0 12.0 41.0 51 32.00667494197771 36.0 30.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 1.0 12 4.0 13 5.0 14 3.0 15 9.0 16 20.0 17 60.0 18 87.0 19 241.0 20 429.0 21 680.0 22 1239.0 23 2148.0 24 3973.0 25 7220.0 26 10478.0 27 10516.0 28 9031.0 29 8359.0 30 8812.0 31 9992.0 32 12156.0 33 15665.0 34 22777.0 35 30550.0 36 42025.0 37 61136.0 38 95790.0 39 67104.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.399288513487804 4.7846992352471185 47.15976106228361 26.65625118898147 2 32.97901685500133 4.551183274359852 45.12588935814024 17.343910512498574 3 17.608577787923753 4.83059392002435 58.47934025796142 19.081488034090476 4 14.31462352090705 4.535013126355439 59.81171289426626 21.338650458471257 5 13.364627325647756 5.91542061408515 59.6652303770498 21.054721683217288 6 17.248078605943004 6.8977571053532705 62.8638283300993 12.99033595860442 7 69.87073393448236 1.9575390937107635 23.496414031883727 4.675312939923145 8 70.09973176578016 2.127087851462923 21.882966175855113 5.8902142069018 9 64.119154967089 4.910493474869688 24.80548263135867 6.164868926682646 10 28.254717878476583 21.773104287942775 33.86290568047787 16.109272153102765 11 18.046360765513832 20.575562150439445 38.31421451128106 23.063862572765668 12 15.484343491991021 16.722548795799565 45.71847772324316 22.07462998896625 13 20.385800707681774 18.1666856903702 47.08176387779173 14.365749724156299 14 18.736445611231595 19.899031693490087 44.56897043716471 16.79555225811361 15 13.807166229121485 20.121609024844958 46.00954038732261 20.061684358710956 16 12.735893923829092 19.36422782787353 44.08695734885668 23.812920899440705 17 12.94182551459118 19.612962751588476 42.19172088422174 25.2534908495986 18 13.771021192405739 17.81427158239166 46.37503329148119 22.039673933721417 19 14.753357683673856 20.90586120305901 46.45992656850436 17.880854544762776 20 14.468477723243161 23.87902826922345 44.04201384925617 17.610480158277213 21 13.505878324392192 24.983829851995587 43.83964920290682 17.670642620705397 22 12.147348095727276 23.219619145455237 41.47381387208462 23.15921888673287 23 11.437763953886543 23.992457101548528 39.00429935699882 25.56547958756611 24 12.631739146977134 23.1451889053761 39.78522238709432 24.43784956055245 25 11.574496823041509 25.37857170033862 37.84504242285888 25.201889053760983 26 11.109367271620439 26.431295894684776 40.74829737853366 21.711039455161128 27 13.216955826960392 24.897985389795686 41.62410113000799 20.26095765323593 28 11.908362820073812 21.585720808126926 42.18078225468934 24.32513411710992 29 13.800745729178557 19.51689304873873 41.656679222311 25.025681999771717 30 20.349893467260205 22.07177643343606 36.665572803713424 20.912757295590307 31 19.08743294144504 26.832696039264924 32.60448769166381 21.475383327626222 32 16.455027964844195 26.244388007457292 33.640803941711376 23.65978008598714 33 20.896824943880073 21.510577179165242 31.221940037286462 26.370657839668226 34 21.60189095613134 18.837271239965 33.52523494273865 26.035602861165014 35 17.8982136742381 18.6736673895674 37.666695202221966 25.761423733972528 36 21.2589886999201 21.026423924209563 34.237197047521214 23.477390328349124 37 24.444032264201194 21.709850473690217 32.21664193585207 21.629475326256514 38 24.64663470684473 21.044972035155805 34.765104820606474 19.54328843739299 39 28.33271506296846 19.509045771030703 33.252482593311264 18.905756572689572 40 30.49428337708785 17.783120267853747 33.043935243313165 18.678661111745235 41 23.4735855876422 20.29044439371457 34.94440322642012 21.29156679222311 42 20.527527299014572 23.880217250694365 35.768605182056845 19.823650268234218 43 20.671156260700833 22.150487006810486 36.836072746642316 20.342283985846365 44 22.68433968725031 18.484143743103907 33.96040216109272 24.87111440855306 45 27.74012669786554 15.42180306662101 32.94429859605068 23.89377163946277 46 28.370286877449303 17.22881710611422 35.63020773884259 18.770688277593884 47 21.18622303390024 22.563063577217214 38.294715215158085 17.95599817372446 48 19.089573108092683 22.638920595061446 39.48678803789522 18.784718258950655 49 24.668749762203706 17.868013544876916 38.084978883689075 19.378257809230302 50 23.475963550584027 15.465081992162233 34.40389224974318 26.65506220751056 51 20.696362667884184 15.172592550317695 31.90132404976601 32.22972073203211 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 506.0 1 881.5 2 1257.0 3 8942.0 4 16627.0 5 10812.5 6 4998.0 7 4912.0 8 4826.0 9 4903.0 10 4980.0 11 4961.0 12 4942.0 13 4777.0 14 4612.0 15 4462.5 16 4313.0 17 4053.5 18 3794.0 19 3528.5 20 3263.0 21 3115.0 22 2967.0 23 2887.5 24 2808.0 25 2799.0 26 2889.5 27 2989.0 28 3132.0 29 3275.0 30 3561.5 31 3848.0 32 4540.5 33 5233.0 34 5792.0 35 6351.0 36 7268.0 37 8185.0 38 9184.5 39 10184.0 40 12344.0 41 14504.0 42 18197.0 43 21890.0 44 26547.5 45 31205.0 46 39936.0 47 48667.0 48 56844.5 49 65022.0 50 61851.5 51 58681.0 52 47012.5 53 35344.0 54 26383.0 55 17422.0 56 13322.5 57 9223.0 58 7392.0 59 5561.0 60 4663.0 61 3765.0 62 3197.0 63 2629.0 64 2106.5 65 1584.0 66 1284.5 67 985.0 68 737.5 69 490.0 70 409.5 71 329.0 72 278.0 73 227.0 74 164.0 75 84.5 76 68.0 77 53.0 78 38.0 79 30.0 80 22.0 81 20.0 82 18.0 83 11.5 84 5.0 85 2.5 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 420528.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.14495934814108 #Duplication Level Percentage of deduplicated Percentage of total 1 73.90012808096267 35.57918662280367 2 11.59340532169214 11.163280558387811 3 5.297596606681751 7.651577198146291 4 2.89167894454563 5.5687906093209945 5 1.7884449271239804 4.3052304156386585 6 1.1159745585013514 3.223712985156435 7 0.766398217181371 2.582874770747943 8 0.5578412984494138 2.148579730924901 9 0.3712602718105457 1.6086879624508679 >10 1.550405843995132 12.81826281994179 >50 0.10663621501808818 3.4994364166017333 >100 0.055292852231562405 4.67241194576646 >500 0.0019747447225558 0.6132273283181131 >1k 0.00246843090319475 2.0830714361937765 >5k 0.0 0.0 >10k+ 4.9368618063895E-4 2.4816691996005504 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10441 2.48283110756002 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCC 2591 0.6161301982269908 No Hit CCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCGTCTTCTGC 1902 0.4522885515352129 TruSeq Adapter, Index 21 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCGTCTTCTGCT 1786 0.42470418141003685 TruSeq Adapter, Index 15 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCGTCTTCTGC 1253 0.297958756610737 TruSeq Adapter, Index 21 (95% over 22bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGC 1232 0.2929650344329034 No Hit GCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCGTCTTCTGC 933 0.2218639424723205 TruSeq Adapter, Index 21 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCGTCTTCTG 616 0.1464825172164517 No Hit TTCCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCGTCTTCT 517 0.1229406840923791 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCG 514 0.12222729520983144 No Hit CGCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCGTCTTCTG 444 0.10558155461705283 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3779629418255147E-4 0.0 0.0 0.4584712551839592 0.0 2 2.3779629418255147E-4 0.0 0.0 1.5452003195982194 0.0 3 2.3779629418255147E-4 0.0 0.0 2.250979720732032 0.0 4 2.3779629418255147E-4 0.0 0.0 3.332001674085911 0.0 5 2.3779629418255147E-4 0.0 0.0 5.4771620439067075 0.0 6 2.3779629418255147E-4 0.0 0.0 7.263012213217669 0.0 7 2.3779629418255147E-4 0.0 0.0 8.87265532853936 0.0 8 2.3779629418255147E-4 0.0 0.0 11.529553323441007 0.0 9 2.3779629418255147E-4 0.0 0.0 12.807946200966404 0.0 10 2.3779629418255147E-4 0.0 0.0 15.833428451851006 0.0 11 2.3779629418255147E-4 0.0 0.0 22.972786592093748 0.0 12 2.3779629418255147E-4 0.0 0.0 29.068694593463455 0.0 13 2.3779629418255147E-4 0.0 0.0 31.057622798006317 0.0 14 2.3779629418255147E-4 0.0 0.0 31.722739032834912 0.0 15 2.3779629418255147E-4 0.0 0.0 32.70031959821938 0.0 16 2.3779629418255147E-4 0.0 0.0 35.20265000190237 0.0 17 2.3779629418255147E-4 0.0 0.0 38.70681619297645 0.0 18 2.3779629418255147E-4 0.0 0.0 41.95083323821481 0.0 19 2.3779629418255147E-4 0.0 0.0 43.97138834988395 0.0 20 2.3779629418255147E-4 0.0 0.0 45.543697447018985 0.0 21 2.3779629418255147E-4 0.0 0.0 47.493389263021726 0.0 22 2.3779629418255147E-4 0.0 0.0 49.12490963740821 0.0 23 2.3779629418255147E-4 0.0 0.0 50.39236388540121 0.0 24 2.3779629418255147E-4 0.0 0.0 51.09196058288627 0.0 25 4.7559258836510294E-4 0.0 0.0 51.561846060190994 0.0 26 4.7559258836510294E-4 0.0 0.0 51.88168207586653 0.0 27 4.7559258836510294E-4 0.0 0.0 52.164897462237946 0.0 28 4.7559258836510294E-4 0.0 0.0 52.42837575619222 0.0 29 4.7559258836510294E-4 0.0 0.0 52.698750142677774 0.0 30 4.7559258836510294E-4 0.0 0.0 52.9560457329833 0.0 31 0.0019023703534604118 0.0 0.0 53.18242780504509 0.0 32 0.0021401666476429633 0.0 0.0 53.3826522847468 0.0 33 0.0021401666476429633 0.0 0.0 53.57217593121029 0.0 34 0.0021401666476429633 0.0 0.0 53.758846022143594 0.0 35 0.0021401666476429633 0.0 0.0 53.95645474260929 0.0 36 0.0021401666476429633 0.0 0.0 54.13361298177529 0.0 37 0.0021401666476429633 0.0 0.0 54.323136628238785 0.0 38 0.0021401666476429633 0.0 0.0 54.51313586729064 0.0 39 0.0021401666476429633 0.0 0.0 54.73167066164441 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCCGG 65 0.0 45.000004 2 CGGGTCC 45 3.8380676E-10 45.0 6 GTTCTCG 35 1.2094642E-7 45.0 1 CGTATGG 35 1.2094642E-7 45.0 2 TGCCTCG 20 7.0281787E-4 45.0 1 GCGATGC 40 6.7975634E-9 45.0 9 CGATGCG 20 7.0281787E-4 45.0 10 TGGGCGC 20 7.0281787E-4 45.0 6 GTCTTCG 25 3.886572E-5 45.0 1 TACGGGA 30 2.1622072E-6 44.999996 4 TCGAGGG 30 2.1622072E-6 44.999996 3 GTGAAGT 30 2.1622072E-6 44.999996 15 CGTTTTT 5490 0.0 44.385246 1 GGACCGA 75 0.0 42.000004 8 GACCGAT 70 0.0 41.785713 9 TGGGTCC 175 0.0 41.142857 6 TCTTGCG 55 6.002665E-11 40.909092 1 GGATCTA 55 6.002665E-11 40.909092 8 TGTTTCG 50 1.0786607E-9 40.5 1 GCTTGCG 50 1.0786607E-9 40.5 1 >>END_MODULE