##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933715.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 422876 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.964263755805483 33.0 31.0 34.0 30.0 34.0 2 32.167372941476934 34.0 31.0 34.0 30.0 34.0 3 32.31494338765974 34.0 31.0 34.0 30.0 34.0 4 35.85119041988668 37.0 35.0 37.0 35.0 37.0 5 35.93394044589903 37.0 35.0 37.0 35.0 37.0 6 35.91734692912343 37.0 35.0 37.0 35.0 37.0 7 35.92768329250182 37.0 35.0 37.0 35.0 37.0 8 35.80824638901238 37.0 35.0 37.0 35.0 37.0 9 37.629789820183696 39.0 37.0 39.0 35.0 39.0 10 36.911983654782965 39.0 37.0 39.0 32.0 39.0 11 36.92485267548879 39.0 37.0 39.0 33.0 39.0 12 37.085441122220224 39.0 37.0 39.0 33.0 39.0 13 37.12691900226071 39.0 37.0 39.0 33.0 39.0 14 38.20537226042622 40.0 38.0 41.0 34.0 41.0 15 38.219423660836746 40.0 37.0 41.0 33.0 41.0 16 38.37556163035973 40.0 38.0 41.0 34.0 41.0 17 38.43535930154466 40.0 38.0 41.0 34.0 41.0 18 38.30381010036039 39.0 38.0 41.0 34.0 41.0 19 38.112680785856845 39.0 37.0 41.0 34.0 41.0 20 37.67819881005307 39.0 35.0 41.0 34.0 41.0 21 37.60569292180214 39.0 35.0 40.0 34.0 41.0 22 37.61690188140258 39.0 35.0 40.0 34.0 41.0 23 37.51136739848088 39.0 35.0 40.0 33.0 41.0 24 37.4230885649694 39.0 35.0 40.0 33.0 41.0 25 37.35570001608036 39.0 35.0 40.0 33.0 41.0 26 37.35762020072078 39.0 35.0 40.0 33.0 41.0 27 37.312330328512374 39.0 35.0 40.0 33.0 41.0 28 37.29375750811113 39.0 35.0 40.0 33.0 41.0 29 37.12280195612898 39.0 35.0 40.0 33.0 41.0 30 36.92612491605104 39.0 35.0 40.0 32.0 41.0 31 36.60100833341216 39.0 35.0 40.0 31.0 41.0 32 36.24572924450666 39.0 35.0 40.0 30.0 41.0 33 35.790297865095205 39.0 35.0 40.0 27.0 41.0 34 35.47292586952204 39.0 35.0 40.0 24.0 41.0 35 35.16111578807972 39.0 35.0 40.0 23.0 41.0 36 34.97902458403882 39.0 35.0 40.0 21.0 41.0 37 34.84147362347355 39.0 35.0 40.0 20.0 41.0 38 34.50811112477417 38.0 34.0 40.0 18.0 41.0 39 34.49586167103359 38.0 34.0 40.0 18.0 41.0 40 34.44226439902005 38.0 34.0 40.0 18.0 41.0 41 34.1724831865606 38.0 33.0 40.0 17.0 41.0 42 33.951080222098206 38.0 33.0 40.0 15.0 41.0 43 34.0185586318448 38.0 33.0 40.0 15.0 41.0 44 34.06217425439136 38.0 33.0 40.0 15.0 41.0 45 34.07732999744606 38.0 33.0 40.0 15.0 41.0 46 33.75746318069599 38.0 33.0 40.0 15.0 41.0 47 33.59148308251118 38.0 33.0 40.0 15.0 41.0 48 33.44374946792913 38.0 33.0 40.0 14.0 41.0 49 33.54551925387111 38.0 33.0 40.0 13.0 41.0 50 33.42237204286836 38.0 33.0 40.0 13.0 41.0 51 32.29769719728715 36.0 31.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 4.0 10 5.0 11 5.0 12 5.0 13 8.0 14 5.0 15 14.0 16 18.0 17 42.0 18 93.0 19 202.0 20 444.0 21 712.0 22 1249.0 23 2123.0 24 3854.0 25 7123.0 26 10552.0 27 10467.0 28 9058.0 29 8138.0 30 8330.0 31 9565.0 32 11598.0 33 15029.0 34 21588.0 35 28933.0 36 39564.0 37 57318.0 38 97758.0 39 79044.0 40 25.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.4618469716891 5.026769076514155 46.89578032330991 26.615603628486838 2 32.87322997758208 4.624287025038073 45.044646657649054 17.457836339730797 3 17.73025662369111 4.869749051731477 58.20807990994996 19.191914414627455 4 14.6253275191782 4.580538975964585 59.43822775470824 21.355905750148978 5 13.405821091762125 5.909770239975785 59.56545181093276 21.118956857329334 6 17.411487055306992 6.972966070431995 62.65784769057596 12.957699183685051 7 69.92026031271578 1.9291707261703195 23.335445851739046 4.815123109374852 8 70.08910413454535 2.18669302585155 21.827911728260766 5.8962911113423315 9 64.26895827618499 4.926030325674666 24.576235113839516 6.228776284300835 10 28.361741976371324 21.861964263755805 33.68883549787645 16.087458261996424 11 18.125644396939055 20.766371229391122 38.10265893547991 23.00532543818992 12 15.506436875112325 16.877997332551388 45.64269431228067 21.97287148005562 13 20.401961804406017 18.17506786859505 46.76548207985319 14.657488247145736 14 18.835545171634237 20.033295812484038 44.39622962759769 16.734929388284037 15 13.960120697320255 20.05315979152281 45.93568800310256 20.051031508054372 16 12.993643526707594 19.477104399398403 43.795817213556695 23.73343486033731 17 12.996717713939784 19.66723105591237 42.02201118058249 25.314040049565357 18 13.899346380499248 18.049026192075218 46.150171681533116 21.901455745892413 19 14.971291820770155 20.76471589780456 46.2965502889736 17.96744199245169 20 14.825386165211551 23.859949488739016 43.725347383157235 17.589316962892195 21 13.663106915502416 24.844162354922013 43.83696402727986 17.655766702295708 22 12.292965313708985 23.2637936416349 41.2832603410929 23.159980703563217 23 11.693025851549864 24.01507770599419 39.04383318041222 25.24806326204372 24 12.983238585306331 23.05049234290903 39.589619652096594 24.37664941968804 25 11.664175786755456 25.440318202026123 37.722169146511035 25.173336864707384 26 11.398376829141403 26.33561611441652 40.53268570455642 21.73332135188566 27 13.383119401432097 25.03097834826285 41.41970695901399 20.166195291291064 28 11.965446135510174 21.623596515290537 42.10643309149727 24.30452425770202 29 13.951607563446494 19.768679234574673 41.49088621723626 24.788826984742574 30 20.39250276676851 22.026551518648493 36.45016506020677 21.130780654376224 31 19.155024167841166 26.8889698162109 32.60482978461771 21.351176231330225 32 16.481427179598747 26.1532931639535 33.73352945071368 23.63175020573407 33 20.996698795864507 21.67987778923372 31.12732810563853 26.196095309263235 34 21.57346361581173 18.964188083504386 33.500600648889986 25.961747651793903 35 18.082369299747445 18.810478721894835 37.53417077346551 25.572981204892216 36 21.380026296124633 21.266517844474503 33.98561280375335 23.36784305564752 37 24.33313784655549 21.751766475278806 32.201638305318816 21.713457372846886 38 24.529176401592903 21.29631381303266 34.542750120602726 19.631759664771707 39 28.32106811453003 19.64642117310985 33.15037978036114 18.88213093199898 40 30.4202650422346 17.885384840946283 33.09835507335484 18.595995043464278 41 23.467872378664197 20.473850490451103 34.632138026277204 21.426139104607497 42 20.634654130288784 23.9230885649694 35.61682384434208 19.82543346039974 43 20.802079096472724 22.290695144675983 36.5686395066166 20.3385862522347 44 22.63003811992168 18.694605510835327 33.96669472847832 24.708661640764667 45 27.641909212156758 15.627985508754339 32.91366736348244 23.816437915606468 46 28.383261286996657 17.337233609852536 35.47895837077536 18.800546732375448 47 21.214020185586318 22.592201969371636 38.069552303748615 18.12422554129343 48 19.186948419867765 22.725574400060538 39.35077895174945 18.73669822832225 49 24.621165542617693 18.004568715178916 38.10360483924365 19.270660902959733 50 23.65587075170972 15.446135510173194 34.359717742316896 26.538275995800188 51 20.794038914480844 15.234016591152017 31.965635316262926 32.00630917810422 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 470.0 1 844.0 2 1218.0 3 8760.0 4 16302.0 5 10684.5 6 5067.0 7 4894.5 8 4722.0 9 4891.5 10 5061.0 11 5062.0 12 5063.0 13 4811.0 14 4559.0 15 4376.5 16 4194.0 17 3974.5 18 3755.0 19 3581.0 20 3407.0 21 3195.0 22 2983.0 23 2842.5 24 2702.0 25 2741.0 26 2918.5 27 3057.0 28 3184.0 29 3311.0 30 3660.0 31 4009.0 32 4628.5 33 5248.0 34 5973.5 35 6699.0 36 7506.0 37 8313.0 38 9222.0 39 10131.0 40 12557.5 41 14984.0 42 18544.5 43 22105.0 44 26650.5 45 31196.0 46 40137.5 47 49079.0 48 57087.0 49 65095.0 50 61624.0 51 58153.0 52 46814.0 53 35475.0 54 26756.0 55 18037.0 56 13578.0 57 9119.0 58 7474.5 59 5830.0 60 4825.0 61 3820.0 62 3299.0 63 2778.0 64 2258.5 65 1739.0 66 1404.0 67 1069.0 68 813.5 69 558.0 70 447.0 71 336.0 72 268.0 73 200.0 74 149.5 75 77.0 76 55.0 77 53.0 78 51.0 79 36.0 80 21.0 81 19.5 82 18.0 83 11.5 84 5.0 85 3.0 86 1.0 87 0.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 422876.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.273420056512165 #Duplication Level Percentage of deduplicated Percentage of total 1 73.76722663255659 35.609963176373356 2 11.76099728468706 11.354871244143949 3 5.211273776652167 7.5469802414944995 4 2.9597971339663123 5.715181213200665 5 1.777328968271745 4.289887393199467 6 1.1426658213303384 3.3096232306379347 7 0.7840459989316371 2.649400729503823 8 0.4915442203612662 1.8982816500680149 9 0.3843462906169541 1.6698338940703075 >10 1.566920431458358 13.109354639091709 >50 0.09517216072229107 3.151251502267828 >100 0.05375008040788164 4.545962376399066 >500 0.0019724800149681335 0.6239182797581794 >1k 0.0024656000187101667 2.1102768218451966 >5k 0.0 0.0 >10k+ 4.931200037420334E-4 2.4152136079460087 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10146 2.399284896754604 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCC 2534 0.5992300343363066 No Hit CCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCGTCTTCTGC 1886 0.44599362460863234 TruSeq Adapter, Index 21 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCGTCTTCTGCT 1839 0.4348792553845572 TruSeq Adapter, Index 15 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCGTCTTCTGC 1327 0.31380357362441946 TruSeq Adapter, Index 21 (95% over 22bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGC 1279 0.3024527284594065 No Hit GCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCGTCTTCTGC 951 0.2248886198318183 TruSeq Adapter, Index 21 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCGTCTTCTG 638 0.15087165031829664 No Hit TTCCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCGTCTTCT 523 0.12367691711045317 No Hit CGCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCGTCTTCTG 509 0.1203662539373244 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTCGTGGTATCGTATGCCG 446 0.10546826965824496 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.72951881875538E-4 0.0 0.0 0.46562112770646713 0.0 2 4.72951881875538E-4 0.0 0.0 1.5385124717411252 0.0 3 4.72951881875538E-4 0.0 0.0 2.258108760014756 0.0 4 4.72951881875538E-4 0.0 0.0 3.3224869701756545 0.0 5 4.72951881875538E-4 0.0 0.0 5.485768877874365 0.0 6 4.72951881875538E-4 0.0 0.0 7.185794417275987 0.0 7 4.72951881875538E-4 0.0 0.0 8.801161569821886 0.0 8 4.72951881875538E-4 0.0 0.0 11.42935517740425 0.0 9 4.72951881875538E-4 0.0 0.0 12.69402850953944 0.0 10 4.72951881875538E-4 0.0 0.0 15.63318797945497 0.0 11 4.72951881875538E-4 0.0 0.0 22.626490980807613 0.0 12 4.72951881875538E-4 0.0 0.0 28.618318372288805 0.0 13 4.72951881875538E-4 0.0 0.0 30.637349956015473 0.0 14 4.72951881875538E-4 0.0 0.0 31.330224462963137 0.0 15 4.72951881875538E-4 0.0 0.0 32.276128226714214 0.0 16 4.72951881875538E-4 0.0 0.0 34.778516633717686 0.0 17 4.72951881875538E-4 0.0 0.0 38.24998344668413 0.0 18 4.72951881875538E-4 0.0 0.0 41.46700214720154 0.0 19 4.72951881875538E-4 0.0 0.0 43.38647735979342 0.0 20 4.72951881875538E-4 0.0 0.0 44.95218456474238 0.0 21 4.72951881875538E-4 0.0 0.0 46.899327462423976 0.0 22 4.72951881875538E-4 0.0 0.0 48.505945005155176 0.0 23 4.72951881875538E-4 0.0 0.0 49.74295065220065 0.0 24 4.72951881875538E-4 0.0 0.0 50.431805068152364 0.0 25 4.72951881875538E-4 0.0 0.0 50.9116147523151 0.0 26 4.72951881875538E-4 0.0 0.0 51.25024829973798 0.0 27 9.45903763751076E-4 0.0 0.0 51.534492380745185 0.0 28 9.45903763751076E-4 0.0 0.0 51.80029133835924 0.0 29 9.45903763751076E-4 0.0 0.0 52.07673171331549 0.0 30 9.45903763751076E-4 0.0 0.0 52.3297609701189 0.0 31 0.001891807527502152 0.0 0.0 52.556068445596345 0.0 32 0.001891807527502152 0.0 0.0 52.747850433696875 0.0 33 0.001891807527502152 0.0 0.0 52.92615329316396 0.0 34 0.001891807527502152 0.0 0.0 53.097834826284775 0.0 35 0.001891807527502152 0.0 0.0 53.291508621912804 0.0 36 0.00236475940937769 0.0 0.0 53.47004795732082 0.0 37 0.00236475940937769 0.0 0.0 53.65591804689791 0.0 38 0.00236475940937769 0.0 0.0 53.84580822747094 0.0 39 0.00236475940937769 0.0 0.0 54.06242018936993 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTCGCG 20 7.028224E-4 45.0 1 TCGTTAG 25 3.88661E-5 45.0 1 TTTACGG 35 1.2095006E-7 45.0 2 ACGTTGT 20 7.028224E-4 45.0 10 CGTTGTC 20 7.028224E-4 45.0 11 TTCCGGA 20 7.028224E-4 45.0 3 TACGGGA 45 3.8380676E-10 45.0 4 CGTTAGG 50 2.1827873E-11 45.0 2 TTGCGGA 25 3.88661E-5 45.0 3 TGGGACG 25 3.88661E-5 45.0 6 CCGTTTG 25 3.88661E-5 45.0 1 AGTCGCG 20 7.028224E-4 45.0 1 TGGTACG 20 7.028224E-4 45.0 6 AGGGTGC 30 2.1622345E-6 44.999996 6 TGTTGCG 30 2.1622345E-6 44.999996 1 CTACGGG 30 2.1622345E-6 44.999996 3 CGTTTTT 5585 0.0 44.07341 1 TCGGGAC 95 0.0 42.63158 5 TTCGTTG 75 0.0 42.0 1 TAGTTGG 65 0.0 41.53846 2 >>END_MODULE