##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933712.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1086752 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.64570481581814 34.0 31.0 34.0 31.0 34.0 2 32.85837247136421 34.0 31.0 34.0 31.0 34.0 3 32.84868672889491 34.0 31.0 34.0 31.0 34.0 4 36.32780339948765 37.0 37.0 37.0 35.0 37.0 5 36.344031572980775 37.0 37.0 37.0 35.0 37.0 6 36.334116707399666 37.0 37.0 37.0 35.0 37.0 7 36.4050657371691 37.0 37.0 37.0 35.0 37.0 8 36.331547583993405 37.0 37.0 37.0 35.0 37.0 9 38.179773306145286 39.0 39.0 39.0 37.0 39.0 10 37.56721772768764 39.0 37.0 39.0 34.0 39.0 11 37.57813374164483 39.0 37.0 39.0 35.0 39.0 12 37.669673485763084 39.0 37.0 39.0 35.0 39.0 13 37.72402811312977 39.0 38.0 39.0 35.0 39.0 14 39.15240275610259 40.0 39.0 41.0 36.0 41.0 15 39.18478916993021 41.0 39.0 41.0 36.0 41.0 16 39.20031341097141 41.0 39.0 41.0 36.0 41.0 17 39.166590905744826 41.0 39.0 41.0 36.0 41.0 18 38.50823370925473 39.0 38.0 40.0 35.0 41.0 19 37.82743164953918 37.0 37.0 40.0 35.0 41.0 20 37.069821817673215 37.0 35.0 40.0 34.0 41.0 21 36.98155788993257 37.0 35.0 40.0 34.0 41.0 22 36.97491792055593 37.0 35.0 40.0 34.0 41.0 23 36.900072877712674 37.0 35.0 40.0 34.0 41.0 24 36.79757387149966 37.0 35.0 40.0 34.0 41.0 25 36.736461492594444 37.0 35.0 40.0 34.0 41.0 26 36.67767347104031 37.0 35.0 40.0 33.0 41.0 27 36.60527608874886 37.0 35.0 40.0 33.0 41.0 28 36.41831162951621 36.0 35.0 40.0 33.0 41.0 29 36.199621440770294 36.0 35.0 40.0 33.0 41.0 30 35.80768565413268 36.0 35.0 40.0 31.0 41.0 31 35.099619784458646 37.0 35.0 40.0 26.0 41.0 32 33.93265528841907 37.0 34.0 40.0 18.0 41.0 33 32.42159296693266 37.0 31.0 40.0 10.0 41.0 34 31.121825402667767 37.0 23.0 40.0 7.0 41.0 35 30.33130649863078 37.0 20.0 40.0 7.0 41.0 36 29.912692132151587 37.0 18.0 40.0 7.0 41.0 37 29.668494743971024 36.0 18.0 40.0 7.0 41.0 38 29.527257368746504 36.0 17.0 40.0 7.0 41.0 39 29.414074232207533 36.0 16.0 40.0 7.0 41.0 40 29.293171763198963 36.0 15.0 40.0 7.0 41.0 41 29.146244957451195 36.0 15.0 40.0 7.0 41.0 42 29.02639240599511 36.0 15.0 40.0 7.0 41.0 43 28.888064618238566 36.0 15.0 40.0 7.0 41.0 44 28.726355231000266 35.0 15.0 40.0 7.0 41.0 45 28.689411199611317 35.0 15.0 40.0 7.0 41.0 46 28.540083662141868 35.0 15.0 40.0 7.0 41.0 47 28.44197020111304 35.0 13.0 40.0 7.0 41.0 48 28.350320036218015 35.0 12.0 40.0 7.0 41.0 49 28.319164814051412 35.0 12.0 40.0 7.0 41.0 50 28.2126060039457 35.0 12.0 40.0 7.0 41.0 51 27.457080364241335 34.0 10.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 0.0 10 1.0 11 4.0 12 3.0 13 4.0 14 13.0 15 14.0 16 53.0 17 124.0 18 368.0 19 824.0 20 1542.0 21 2799.0 22 5021.0 23 10066.0 24 22520.0 25 50863.0 26 81544.0 27 78011.0 28 54906.0 29 36371.0 30 26756.0 31 23533.0 32 23030.0 33 26715.0 34 38129.0 35 49980.0 36 63838.0 37 90450.0 38 177568.0 39 221631.0 40 69.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 14.674369129295368 3.157022025264274 36.64672344748388 45.52188539795648 2 50.093305556373494 2.9063668619887517 34.98295839345131 12.01736918818645 3 12.814423161862134 2.9761159859839226 70.81873325284886 13.390727599305086 4 10.8811393951886 3.0595756897617856 71.04831645122346 15.010968463826154 5 10.389674921233178 3.951039427578693 71.20713833514914 14.452147316038985 6 12.586772327081064 4.657640381614205 72.7159462324431 10.039641058861635 7 53.93585657077236 1.0919694649745297 42.30431598009481 2.667857984158299 8 55.77629486764229 1.256680456994788 40.545773092665115 2.4212515826978005 9 51.52665925620564 3.4743897411736993 41.944068195871736 3.0548828067489175 10 22.162278054238683 14.483525220105415 50.69693913606784 12.657257589588056 11 16.766014693324696 17.506938105473928 51.62576190335974 14.101285297841642 12 12.644467182945144 15.614786078148466 57.18149126939724 14.559255469509145 13 14.266088307175878 15.945680339212625 58.24677571331822 11.541455640293277 14 14.214834663290244 16.51802803215453 57.287311180471725 11.979826124083507 15 12.857395247489766 17.239075704484556 57.539898707340775 12.363630340684903 16 12.729399163746653 16.385063013456612 57.106037071935454 13.779500750861281 17 13.22049556844616 16.843677306321958 55.61185992756397 14.323967197667914 18 13.753367833691588 15.959206884367363 56.73649553900062 13.550929742940433 19 14.1648692618003 18.373833220458764 54.99782839139012 12.463469126350814 20 14.57563455139719 17.953314095580225 54.68432540266777 12.78672595035482 21 14.481960925767792 18.86253717499485 54.47296163246076 12.182540266776597 22 13.987459880451105 17.308456759223816 54.037995789287706 14.666087571037368 23 12.648976031330056 18.79472041459321 53.47558596625541 15.080717587821324 24 12.494662995789287 18.317886693560258 54.26978740319779 14.917662907452666 25 12.681274108536261 19.228121963428638 53.45359382821472 14.637010099820383 26 12.713480168428493 19.507118459409323 54.11943111215807 13.659970260004123 27 13.171910426665882 19.016850210535615 53.97505594652689 13.836183416271606 28 12.851782191337122 18.050944465710668 54.0114948028621 15.085778540090104 29 13.596938399929332 17.260791790583315 53.30747033361798 15.83479947586938 30 14.526957392302936 17.729620005300198 52.04710918406408 15.696313418332794 31 13.738829098083094 19.195179765024587 50.363652424840254 16.702338712052057 32 13.871794116781015 18.927225346721237 48.884474102647154 18.316506433850595 33 15.596474632666881 19.234931244662995 44.968309237066045 20.200284885604074 34 15.619386943847354 20.148019051264686 42.2272974882954 22.005296516592562 35 16.38027811312977 21.033133594417126 40.5578273607962 22.0287609316569 36 16.644827890815936 22.195864373840582 38.614973793468984 22.544333941874502 37 16.94848502694267 23.874720267365507 38.03912944259592 21.137665263095904 38 18.56863387414976 24.037222843850298 37.14122449280057 20.252918789199377 39 18.866769971437826 23.573179529460266 37.093559524160064 20.466490974941845 40 18.641051500250285 23.58827036895262 38.16970201113041 19.600976119666676 41 17.56904979240894 23.701819734401226 38.92369188186449 19.805438591325345 42 17.93546273666853 24.278032154530198 38.5991468154648 19.187358293336473 43 18.030608639321574 24.049829215865255 38.08707046317835 19.832491681634817 44 18.763342510526783 24.354774594387678 35.608400076558404 21.273482818527135 45 19.662167633461912 23.641364359117812 35.217050440210826 21.479417567209445 46 19.509234857630812 23.92220120137805 35.91684211301198 20.651721827979152 47 18.01524174788728 24.58417375813433 37.15033420688437 20.250250287094023 48 17.944112364182445 23.854384440976414 37.65449707016872 20.547006124672418 49 19.29704293159801 22.76600365124702 37.092547333706314 20.84440608344866 50 18.583448661700185 22.41781013515503 36.67101601837402 22.327725184770767 51 18.094652689850122 22.426551779982923 35.69333205735991 23.785463472807045 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 345.0 1 1040.5 2 1736.0 3 35598.5 4 69461.0 5 49188.5 6 28916.0 7 29145.5 8 29375.0 9 30304.5 10 31234.0 11 31698.5 12 32163.0 13 31910.0 14 31657.0 15 30873.0 16 30089.0 17 29030.0 18 27971.0 19 26594.0 20 25217.0 21 24152.0 22 23087.0 23 22180.5 24 21274.0 25 20334.0 26 18974.5 27 18555.0 28 18292.5 29 18030.0 30 18585.5 31 19141.0 32 20375.5 33 21610.0 34 23138.0 35 24666.0 36 26692.5 37 28719.0 38 31265.5 39 33812.0 40 36659.0 41 39506.0 42 44010.0 43 48514.0 44 52927.0 45 57340.0 46 65427.5 47 73515.0 48 78078.5 49 82642.0 50 79251.0 51 75860.0 52 65360.5 53 54861.0 54 46710.0 55 38559.0 56 32379.5 57 26200.0 58 22546.0 59 18892.0 60 16359.0 61 13826.0 62 11312.5 63 8799.0 64 6876.0 65 4953.0 66 4037.5 67 3122.0 68 2464.0 69 1806.0 70 1329.5 71 853.0 72 616.0 73 379.0 74 334.0 75 226.0 76 163.0 77 126.0 78 89.0 79 78.5 80 68.0 81 52.5 82 37.0 83 28.0 84 19.0 85 12.0 86 5.0 87 3.5 88 2.0 89 1.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1086752.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.48650871199999 #Duplication Level Percentage of deduplicated Percentage of total 1 80.33065870352914 40.55614500476422 2 7.726852862556667 7.802036487236184 3 3.3382293028326684 5.056066283403454 4 2.0216311930036537 4.0826040335211955 5 1.3809406798581874 3.4859436832207784 6 1.0509814183702264 3.1836229520819126 7 0.7653980595352012 2.7049593060610277 8 0.5850455390591721 2.36295253637021 9 0.4712981014751381 2.1414776135466256 >10 2.2208682732261247 17.692815547932735 >50 0.06763469791732198 2.400900345163199 >100 0.03663376124801874 3.1662517550449825 >500 0.002916119915031481 1.0541289486275904 >1k 7.290299787578703E-4 0.6856991031051679 >5k 0.0 0.0 >10k+ 1.8225749468946757E-4 3.6243963999207542 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 39389 3.624469980271488 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCC 3335 0.30687774211595653 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGC 1840 0.16931185771914842 No Hit CCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTGC 1241 0.1141934866464474 TruSeq Adapter, Index 20 (95% over 22bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.600865698889903E-4 0.0 0.0 0.0949618680250876 0.0 2 4.600865698889903E-4 0.0 0.0 0.34902167191778805 0.0 3 4.600865698889903E-4 0.0 0.0 0.5916713288772415 0.0 4 4.600865698889903E-4 0.0 0.0 0.9066465946232443 0.0 5 4.600865698889903E-4 0.0 0.0 1.5695393245193014 0.0 6 4.600865698889903E-4 0.0 0.0 2.505815494243397 0.0 7 4.600865698889903E-4 0.0 0.0 3.338756220370425 0.0 8 4.600865698889903E-4 0.0 0.0 4.503695415329348 0.0 9 4.600865698889903E-4 0.0 0.0 5.185819763846766 0.0 10 4.600865698889903E-4 0.0 0.0 6.266287064574071 0.0 11 4.600865698889903E-4 0.0 0.0 8.199110744677718 0.0 12 4.600865698889903E-4 0.0 0.0 9.687674832896558 0.0 13 5.521038838667883E-4 0.0 0.0 10.285051235240422 0.0 14 5.521038838667883E-4 0.0 0.0 10.525768528606342 0.0 15 6.441211978445864E-4 0.0 0.0 10.787189717617267 0.0 16 6.441211978445864E-4 0.0 0.0 11.3950560937546 0.0 17 6.441211978445864E-4 0.0 0.0 12.207753010806513 0.0 18 7.361385118223845E-4 0.0 0.0 13.031584022849739 0.0 19 7.361385118223845E-4 0.0 0.0 13.525440946968581 0.0 20 7.361385118223845E-4 0.0 0.0 13.95092900680192 0.0 21 7.361385118223845E-4 0.0 0.0 14.451779246783074 0.0 22 7.361385118223845E-4 0.0 0.0 14.90036365242484 0.0 23 7.361385118223845E-4 0.0 0.0 15.295485998645505 0.0 24 7.361385118223845E-4 0.0 0.0 15.567121109507966 0.0 25 7.361385118223845E-4 0.0 0.0 15.784097935867614 0.0 26 7.361385118223845E-4 0.0 0.0 15.972365360266188 0.0 27 7.361385118223845E-4 0.0 0.0 16.147474308765936 0.0 28 8.281558258001826E-4 0.0 0.0 16.32746017490651 0.0 29 9.201731397779806E-4 0.0 0.0 16.511954889431994 0.0 30 9.201731397779806E-4 0.0 0.0 16.703442919819793 0.0 31 9.201731397779806E-4 0.0 0.0 16.886189305379702 0.0 32 9.201731397779806E-4 0.0 0.0 17.062034392391272 0.0 33 9.201731397779806E-4 0.0 0.0 17.242756397043667 0.0 34 9.201731397779806E-4 0.0 0.0 17.407467389063925 0.0 35 0.0010121904537557787 0.0 0.0 17.58110406054003 0.0 36 0.0010121904537557787 0.0 0.0 17.756120991725805 0.0 37 0.0010121904537557787 0.0 0.0 17.941167810135155 0.0 38 0.0010121904537557787 0.0 0.0 18.127042784370307 2.7605194193339416E-4 39 0.0010121904537557787 0.0 0.0 18.32929684049351 2.7605194193339416E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 20 7.033115E-4 45.000004 1 TATAGCG 20 7.033115E-4 45.000004 1 GACGATT 20 7.033115E-4 45.000004 9 TATCCGG 45 3.8562575E-10 45.000004 2 TCGTAAC 25 3.8906648E-5 45.0 34 ACACGCG 30 2.1653923E-6 44.999996 36 CGTTTTT 39790 0.0 44.632442 1 CTTTGCG 220 0.0 40.909092 1 GTTTTTT 44580 0.0 40.341522 2 TCAAGCG 75 0.0 39.0 17 CGGACAG 35 6.247974E-6 38.57143 6 CTGCGCG 70 0.0 38.57143 1 CTACGGG 70 0.0 38.57143 3 TACACGC 35 6.247974E-6 38.57143 35 TTGTCCG 95 0.0 37.894737 1 CGCGGGC 180 0.0 37.500004 4 CTATCCG 30 1.1398811E-4 37.499996 1 CGTAACC 30 1.1398811E-4 37.499996 35 GCTCGTA 30 1.1398811E-4 37.499996 32 TAGCTCG 30 1.1398811E-4 37.499996 30 >>END_MODULE