##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933710.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 841005 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.59279433534878 34.0 31.0 34.0 31.0 34.0 2 32.79165403297245 34.0 31.0 34.0 31.0 34.0 3 32.80923894626073 34.0 31.0 34.0 31.0 34.0 4 36.283028043828516 37.0 37.0 37.0 35.0 37.0 5 36.2987187947753 37.0 37.0 37.0 35.0 37.0 6 36.28689484604729 37.0 37.0 37.0 35.0 37.0 7 36.366277251621575 37.0 37.0 37.0 35.0 37.0 8 36.29849406365004 37.0 37.0 37.0 35.0 37.0 9 38.149227412441064 39.0 39.0 39.0 37.0 39.0 10 37.661242204267516 39.0 38.0 39.0 35.0 39.0 11 37.513354855203 39.0 37.0 39.0 35.0 39.0 12 37.60309035023573 39.0 37.0 39.0 35.0 39.0 13 37.638594300866224 39.0 37.0 39.0 35.0 39.0 14 39.04713883984043 40.0 39.0 41.0 35.0 41.0 15 39.05792712290652 40.0 39.0 41.0 35.0 41.0 16 39.07331704329938 41.0 39.0 41.0 35.0 41.0 17 38.99448398047574 40.0 38.0 41.0 35.0 41.0 18 38.419286448950956 39.0 38.0 40.0 35.0 41.0 19 37.84224112817403 38.0 37.0 40.0 35.0 41.0 20 37.190567238006906 38.0 35.0 40.0 34.0 41.0 21 37.09583296175409 38.0 35.0 40.0 34.0 41.0 22 37.09500538046742 38.0 35.0 40.0 34.0 41.0 23 37.0021165153596 38.0 35.0 40.0 34.0 41.0 24 36.88460591791963 38.0 35.0 40.0 33.0 41.0 25 36.821533760203565 38.0 35.0 40.0 33.0 41.0 26 36.786946569877706 38.0 35.0 40.0 33.0 41.0 27 36.71062835536055 37.0 35.0 40.0 33.0 41.0 28 36.55609657493118 37.0 35.0 40.0 33.0 41.0 29 36.37799656363517 37.0 35.0 40.0 33.0 41.0 30 36.10468903276437 37.0 35.0 40.0 32.0 41.0 31 35.559914625953475 37.0 35.0 40.0 30.0 41.0 32 34.648789246199485 37.0 35.0 40.0 21.0 41.0 33 33.487769989476874 37.0 33.0 40.0 15.0 41.0 34 32.445281538159705 37.0 31.0 40.0 10.0 41.0 35 31.779717124155027 37.0 30.0 40.0 7.0 41.0 36 31.415178268856902 37.0 27.0 40.0 7.0 41.0 37 31.181028650245835 37.0 24.0 40.0 7.0 41.0 38 31.01609859632226 37.0 23.0 40.0 7.0 41.0 39 30.895250325503415 37.0 23.0 40.0 7.0 41.0 40 30.74628212674122 37.0 23.0 40.0 7.0 41.0 41 30.560047799953626 36.0 22.0 40.0 7.0 41.0 42 30.3858098346621 36.0 21.0 40.0 7.0 41.0 43 30.219557553165558 36.0 21.0 40.0 7.0 41.0 44 30.054868877117258 36.0 20.0 40.0 7.0 41.0 45 30.01139945660252 35.0 20.0 40.0 7.0 41.0 46 29.86955606684859 35.0 20.0 40.0 7.0 41.0 47 29.76350437868978 35.0 20.0 40.0 7.0 41.0 48 29.670686856796333 35.0 20.0 40.0 7.0 41.0 49 29.630157965767147 35.0 20.0 40.0 7.0 41.0 50 29.523194273517994 35.0 20.0 40.0 7.0 41.0 51 28.78059821285248 35.0 18.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 1.0 11 4.0 12 6.0 13 8.0 14 9.0 15 29.0 16 66.0 17 125.0 18 302.0 19 659.0 20 1207.0 21 2077.0 22 3526.0 23 6271.0 24 12529.0 25 27376.0 26 45422.0 27 49497.0 28 40423.0 29 30914.0 30 24218.0 31 21204.0 32 21196.0 33 23618.0 34 33622.0 35 45266.0 36 58023.0 37 72171.0 38 136983.0 39 184186.0 40 65.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 17.722486786642172 3.3314903002954797 36.63842664431246 42.30759626874988 2 46.96666488308631 3.4085409718134847 37.111907777004895 12.512886368095314 3 14.945808883419243 3.562404504134934 68.21445770239178 13.277328910054042 4 11.987086878199298 3.6243541952782685 68.74596464943728 15.642594277085154 5 11.809561179778955 4.223161574544741 68.36071129184725 15.60656595382905 6 14.816439854697652 4.886058941385604 68.89079137460539 11.40670982931136 7 58.88538118084911 1.2903609372120262 37.462678580983464 2.3615793009554045 8 60.954215492178996 1.4074827141336854 35.74746880220688 1.890832991480431 9 56.82201651595412 3.8304171794460196 36.80572648200665 2.541839822593207 10 23.17441632332745 25.270004340045542 41.78358035921308 9.771998977413928 11 16.546869519206187 19.100124256098358 51.638337465294505 12.714668759400954 12 14.199915577196332 19.011064143494984 52.88862729710287 13.900392982205814 13 14.850327881522702 18.713681844935522 54.02215206806142 12.413838205480348 14 15.095391822878579 19.405116497523796 53.037496804418524 12.461994875179101 15 13.817278137466484 18.708568914572446 53.79028662136373 13.683866326597343 16 15.551037151978884 19.53662582267644 52.17055784448368 12.741779180860993 17 15.115249017544485 18.683598789543463 52.494931659145905 13.706220533766148 18 16.385514949376045 17.010362601887028 52.68957972901469 13.914542719722236 19 15.696101687861546 19.135201336496216 51.25688907913746 13.911807896504778 20 17.473498968496028 19.68252269606007 50.54345693545223 12.300521399991677 21 16.98848401614735 20.250176871718956 50.64571554271377 12.11562356941992 22 16.67100671220742 18.18800126039679 50.87829442155516 14.262697605840632 23 14.687189731333344 20.863609609930975 50.332518831635966 14.11668182709972 24 13.81002491067235 20.888579734959958 51.30183530418964 13.999560050178061 25 14.200629009340016 22.434825001040423 49.936445086533375 13.428100903086188 26 14.615965422322102 21.87442405217567 49.77080992384112 13.738800601661108 27 14.065195807397101 21.360752908722304 50.57104297834138 14.003008305539206 28 13.191003620668129 21.261348030035492 50.920505823389874 14.627142525906505 29 14.537131170444884 19.729490312186016 50.96295503593914 14.770423481429956 30 15.643783330657962 19.423903543974173 50.806356680400235 14.125956444967628 31 15.599669443106759 21.376329510526094 48.4026848829674 14.621316163399742 32 15.379337816065302 21.415568278428783 47.71481739109756 15.490276514408357 33 15.96387655245807 22.565501988692098 44.814240105587956 16.65638135326187 34 16.17219873841416 24.179166592350818 43.322453493142135 16.326181176092888 35 16.088727177602987 25.312929174023935 41.477042348142994 17.121301300230083 36 17.374450805881057 26.42576441281562 39.48573432976023 16.714050451543095 37 18.373017996325824 25.941462892610627 38.30464741588932 17.38087169517423 38 17.829025986765835 26.96143304736595 37.75102407238958 17.458516893478635 39 18.751018127121718 25.755257103108782 37.3586363933627 18.1350883764068 40 19.585852640590723 26.06857271954388 38.04543373701702 16.30014090284838 41 18.442458724977854 26.51066283791416 36.79252798734847 18.254350449759514 42 19.91129660346847 26.727427304237196 36.016076004304374 17.345200087989966 43 19.402500579663617 26.317560537690028 36.23652653670311 18.043412345943246 44 19.020576572077456 27.090802076087538 36.012627748943224 17.87599360289178 45 19.58014518344124 25.773568528130035 35.839501548742284 18.806784739686446 46 18.943288089844888 26.293541655519288 36.217858395610016 18.54531185902581 47 17.760060879542927 27.379147567493657 37.025939203690825 17.834852349272595 48 18.642576441281562 26.558819507612913 36.58670281389528 18.211901237210242 49 19.599883472749866 25.900678355063288 36.27517077781939 18.224267394367452 50 18.33021206770471 26.16964227323262 36.12820375622023 19.371941902842433 51 18.00583825304249 25.308767486519105 35.46007455365901 21.225319706779388 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 479.0 1 1254.5 2 2030.0 3 35843.0 4 69656.0 5 47031.0 6 24406.0 7 23953.0 8 23500.0 9 23513.0 10 23526.0 11 23158.0 12 22790.0 13 22076.0 14 21362.0 15 20522.0 16 19682.0 17 18537.5 18 17393.0 19 16313.0 20 15233.0 21 14509.5 22 13786.0 23 13296.5 24 12807.0 25 12627.0 26 12792.0 27 13137.0 28 13791.5 29 14446.0 30 15619.5 31 16793.0 32 18030.5 33 19268.0 34 21528.5 35 23789.0 36 25797.0 37 27805.0 38 29773.5 39 31742.0 40 33733.5 41 35725.0 42 37727.0 43 39729.0 44 41724.0 45 43719.0 46 46464.5 47 49210.0 48 50728.5 49 52247.0 50 51260.0 51 50273.0 52 45537.0 53 40801.0 54 35462.0 55 30123.0 56 26276.0 57 22429.0 58 19423.0 59 16417.0 60 14311.5 61 12206.0 62 10375.5 63 8545.0 64 6708.0 65 4871.0 66 3796.5 67 2722.0 68 2129.0 69 1536.0 70 1260.5 71 985.0 72 978.5 73 972.0 74 1031.5 75 974.5 76 858.0 77 575.5 78 293.0 79 199.0 80 105.0 81 79.0 82 53.0 83 33.0 84 13.0 85 8.0 86 3.0 87 2.5 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 841005.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.07905602120651 #Duplication Level Percentage of deduplicated Percentage of total 1 77.1342607528834 34.77139661633582 2 8.24251825303456 7.431298841687243 3 3.8423068468811445 5.196226968036613 4 2.3048030533750916 4.1559338384377424 5 1.713810739110085 3.862848515904443 6 1.2755041550349695 3.449911395606183 7 0.9491375641901608 2.995035779957182 8 0.7686326265812603 2.771938658670699 9 0.639518348456351 2.594599511098798 >10 3.0141233004030026 21.27489350764218 >50 0.07560595722533021 2.3653414758957663 >100 0.03635377211849458 2.929521921736515 >500 0.0026343313124276746 0.7939836866726567 >1k 5.268662624855349E-4 0.3713411588730777 >5k 0.0 0.0 >10k+ 2.6343313124276745E-4 5.035728123445111 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 42405 5.04218167549539 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCC 2020 0.24018882170736203 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGC 1107 0.13162823050992561 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 996 0.1184297358517488 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.945267864043614E-4 0.0 0.0 0.07978549473546531 0.0 2 5.945267864043614E-4 0.0 0.0 0.24827438600246135 0.0 3 7.134321436852337E-4 0.0 0.0 0.40154339153750573 0.0 4 7.134321436852337E-4 0.0 0.0 0.5876302756820708 0.0 5 7.134321436852337E-4 0.0 0.0 0.9928597332952837 0.0 6 7.134321436852337E-4 0.0 0.0 1.5504069535852938 0.0 7 7.134321436852337E-4 0.0 0.0 2.0446965238018797 0.0 8 7.134321436852337E-4 0.0 0.0 2.762409260349225 0.0 9 7.134321436852337E-4 0.0 0.0 3.2156764823039103 0.0 10 7.134321436852337E-4 0.0 0.0 3.8659698812730006 0.0 11 7.134321436852337E-4 0.0 0.0 5.015071254035351 0.0 12 7.134321436852337E-4 0.0 0.0 5.919465401513666 0.0 13 7.134321436852337E-4 0.0 0.0 6.270117300134958 0.0 14 7.134321436852337E-4 0.0 0.0 6.415776362804026 0.0 15 7.134321436852337E-4 0.0 0.0 6.576417500490485 0.0 16 7.134321436852337E-4 0.0 0.0 6.910898270521578 0.0 17 7.134321436852337E-4 0.0 0.0 7.367019221051004 0.0 18 7.134321436852337E-4 0.0 0.0 7.845018757320111 0.0 19 7.134321436852337E-4 0.0 0.0 8.140855286234922 0.0 20 7.134321436852337E-4 0.0 0.0 8.408392340116883 0.0 21 7.134321436852337E-4 0.0 0.0 8.729912426204363 0.0 22 7.134321436852337E-4 0.0 0.0 9.031218601554093 0.0 23 7.134321436852337E-4 0.0 0.0 9.286508403636125 0.0 24 7.134321436852337E-4 0.0 0.0 9.470930612778758 0.0 25 7.134321436852337E-4 0.0 0.0 9.620632457595377 0.0 26 7.134321436852337E-4 0.0 0.0 9.7547577006082 0.0 27 7.134321436852337E-4 0.0 0.0 9.891855577553047 0.0 28 7.134321436852337E-4 0.0 0.0 10.024910672350343 0.0 29 7.134321436852337E-4 0.0 0.0 10.179249826100914 0.0 30 7.134321436852337E-4 0.0 0.0 10.349522297727123 0.0 31 7.134321436852337E-4 0.0 0.0 10.499699763972865 0.0 32 7.134321436852337E-4 0.0 0.0 10.664383683806873 0.0 33 7.134321436852337E-4 0.0 0.0 10.809448219689537 0.0 34 7.134321436852337E-4 0.0 0.0 10.935725709121824 0.0 35 7.134321436852337E-4 0.0 0.0 11.09208625394617 0.0 36 7.134321436852337E-4 0.0 0.0 11.217412500520211 0.0 37 7.134321436852337E-4 0.0 0.0 11.366282007835864 0.0 38 7.134321436852337E-4 0.0 0.0 11.523712700875738 0.0 39 7.134321436852337E-4 0.0 0.0 11.720738877890144 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGTTCG 65 0.0 45.000004 1 TACGAAT 25 3.8899096E-5 45.0 12 CTTACGG 35 1.2114106E-7 45.0 2 CGTTTTT 27105 0.0 44.493637 1 GTACGGC 65 0.0 41.538464 9 GCGATCG 105 0.0 40.714287 9 GTTTTTT 30480 0.0 40.08366 2 CGGGTGA 40 3.456753E-7 39.375 6 CGCATGG 40 3.456753E-7 39.375 2 TGGGCGA 1310 0.0 38.64504 6 CTTCGCG 35 6.2462914E-6 38.571426 1 CGGGTCC 35 6.2462914E-6 38.571426 6 CCGCGAG 35 6.2462914E-6 38.571426 16 TCCGCCG 30 1.1396617E-4 37.499996 3 ATCGTCG 30 1.1396617E-4 37.499996 11 GCGGGAC 325 0.0 37.384617 5 GGCGATT 860 0.0 37.151165 8 GGCCGAT 270 0.0 36.666664 8 GCGATTC 135 0.0 36.666664 9 GCGATTT 455 0.0 36.593407 9 >>END_MODULE