##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933709.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 846788 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.5132477078088 34.0 31.0 34.0 31.0 34.0 2 32.73658932341979 34.0 31.0 34.0 31.0 34.0 3 32.75995290438693 34.0 31.0 34.0 31.0 34.0 4 36.2078879247226 37.0 37.0 37.0 35.0 37.0 5 36.27530975875898 37.0 37.0 37.0 35.0 37.0 6 36.2836932030213 37.0 37.0 37.0 35.0 37.0 7 36.304002890924295 37.0 37.0 37.0 35.0 37.0 8 36.261860111385616 37.0 37.0 37.0 35.0 37.0 9 38.12234349093279 39.0 39.0 39.0 37.0 39.0 10 37.67089755641317 39.0 38.0 39.0 35.0 39.0 11 37.516450398446835 39.0 37.0 39.0 35.0 39.0 12 37.58545468287222 39.0 37.0 39.0 35.0 39.0 13 37.6356183602035 39.0 37.0 39.0 35.0 39.0 14 39.066525505793656 40.0 39.0 41.0 35.0 41.0 15 39.07371384573234 41.0 39.0 41.0 35.0 41.0 16 39.12517300670298 41.0 39.0 41.0 35.0 41.0 17 39.07098707114414 41.0 39.0 41.0 35.0 41.0 18 38.52885373907046 39.0 38.0 41.0 35.0 41.0 19 37.981510130044356 38.0 37.0 41.0 35.0 41.0 20 37.29360595568194 38.0 35.0 41.0 34.0 41.0 21 37.2214840078036 38.0 35.0 41.0 34.0 41.0 22 37.20414554764593 38.0 35.0 41.0 34.0 41.0 23 37.06227178467338 38.0 35.0 40.0 34.0 41.0 24 36.961015035640564 38.0 35.0 40.0 34.0 41.0 25 36.91142765367483 38.0 35.0 40.0 33.0 41.0 26 36.89200602748267 38.0 35.0 40.0 33.0 41.0 27 36.82203692069326 38.0 35.0 40.0 33.0 41.0 28 36.72167177617066 38.0 35.0 40.0 33.0 41.0 29 36.49622337586267 38.0 35.0 40.0 33.0 41.0 30 36.134453960141144 37.0 35.0 40.0 32.0 41.0 31 35.59964949904817 37.0 35.0 40.0 30.0 41.0 32 34.753623102830936 38.0 35.0 40.0 21.0 41.0 33 33.5561958837395 38.0 33.0 40.0 15.0 41.0 34 32.52557428777923 37.0 32.0 40.0 10.0 41.0 35 31.906276423378696 37.0 30.0 40.0 7.0 41.0 36 31.540348942120104 37.0 27.0 40.0 7.0 41.0 37 31.34118929413265 37.0 25.0 40.0 7.0 41.0 38 31.158661908293457 37.0 24.0 40.0 7.0 41.0 39 31.074526327723113 37.0 23.0 40.0 7.0 41.0 40 30.91983471659967 37.0 23.0 40.0 7.0 41.0 41 30.74512274618913 37.0 23.0 40.0 7.0 41.0 42 30.524292975337392 36.0 22.0 40.0 7.0 41.0 43 30.391311638804517 36.0 21.0 40.0 7.0 41.0 44 30.21578010080445 36.0 21.0 40.0 7.0 41.0 45 30.15549110284983 36.0 20.0 40.0 7.0 41.0 46 30.002198897480834 35.0 20.0 40.0 7.0 41.0 47 29.965392754739085 35.0 20.0 40.0 7.0 41.0 48 29.848584297368408 35.0 20.0 40.0 7.0 41.0 49 29.77780861325385 35.0 20.0 40.0 7.0 41.0 50 29.62372754455661 35.0 20.0 40.0 7.0 41.0 51 28.975338573527257 35.0 19.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 5.0 12 10.0 13 7.0 14 14.0 15 26.0 16 42.0 17 129.0 18 319.0 19 693.0 20 1204.0 21 2058.0 22 3372.0 23 6058.0 24 12618.0 25 26991.0 26 44932.0 27 49058.0 28 40494.0 29 30840.0 30 24210.0 31 21333.0 32 21035.0 33 23306.0 34 33011.0 35 44602.0 36 57644.0 37 70488.0 38 133695.0 39 198504.0 40 89.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 17.81059722150054 3.4673377515978023 36.63443506521113 42.08762996169053 2 46.86355971034072 3.458008379901463 37.17447578378532 12.503956125972499 3 15.1829029225733 3.622394271057219 67.81142387468883 13.383278931680657 4 12.152746614264727 3.654988025338101 68.50770204584855 15.684563314548624 5 11.83165089727299 4.244746028521897 68.2878122977652 15.635790776439912 6 14.919200555510942 4.957793450072509 68.65472822005036 11.468277774366193 7 58.987727742953375 1.3375248586423047 37.230570107275966 2.444177291128358 8 61.09250485363514 1.4456983329947992 35.54337094998984 1.9184258633802087 9 57.01202662295639 3.875586333297118 36.54161372149818 2.5707733222483076 10 23.262374998228598 25.338927807196132 41.56530324000812 9.833393954567141 11 16.550895855869474 19.320892596494048 51.422315857097644 12.705895690538835 12 14.30523342324171 19.07053477375683 52.75523507654809 13.868996726453375 13 15.048867012758802 18.763964534216356 53.71580608133323 12.471362371691615 14 15.145113062537494 19.558496341469176 52.84286031450611 12.45353028148722 15 13.921312063940444 18.861155330495944 53.52083402221099 13.696698583352621 16 15.545685578917038 19.619668677402135 52.04372286806142 12.790922875619398 17 15.210536757724483 18.66866323093856 52.39800280589711 13.722797205439852 18 16.468584816978986 17.10498967864448 52.52684260995668 13.899582894419854 19 15.753765995739194 19.224882733340575 51.14160805301917 13.879743217901055 20 17.56779737077049 19.72040227306008 50.36325502959419 12.348545326575247 21 16.98181835359027 20.345352083402222 50.4805216890178 12.192307873989712 22 16.88427327737285 18.20030515311979 50.69261727846875 14.222804291038607 23 14.79874537664681 20.89732022655021 50.16722013065844 14.136714266144537 24 13.96713226923386 20.981756945067715 51.14208042626962 13.909030359428806 25 14.29897447767328 22.516261449146658 49.819435325016414 13.365328748163648 26 14.641326990935157 22.024520895430733 49.632257424526564 13.701894689107547 27 14.128683920886928 21.472670845595356 50.49115008715287 13.907495146364852 28 13.325295115188219 21.354695626296074 50.68836591921473 14.631643339300982 29 14.68195109047365 19.849478263744878 50.69131825203003 14.777252393751446 30 15.73061970646726 19.516691308804564 50.61408522558185 14.138603759146326 31 15.611935927292308 21.5317175019013 48.305242870706714 14.551103700099672 32 15.526318275648688 21.537622167531897 47.5483828301771 15.387676726642324 33 16.0269158278105 22.703203163011285 44.6222667302796 16.647614278898615 34 16.16083364431239 24.264987222303574 43.17172657146771 16.402452561916324 35 16.159652711186272 25.40187154281827 41.42807881075311 17.01039693524235 36 17.44261845940188 26.50722494886559 39.42498004223017 16.625176549502356 37 18.43188613915171 26.028002286286533 38.222435839903255 17.317675734658497 38 17.885232195071257 26.991407530574357 37.708257556791075 17.41510271756331 39 18.886899672645338 25.78402150243036 37.33803502175279 17.991043803171515 40 19.593924335252744 26.093662168098746 38.014355423081106 16.298058073567407 41 18.4565676414876 26.55918600641483 36.80661511499927 18.177631237098304 42 19.93922918132992 26.805882936461074 35.98220569965564 17.272682182553368 43 19.408872114389904 26.36362348072953 36.31770880078603 17.90979560409453 44 19.023179355399463 27.08080416822156 36.093567693448655 17.80244878293032 45 19.691705598095393 25.89998913541524 35.76231595157229 18.645989314917074 46 18.946418702201733 26.442509813554278 36.25618218491523 18.354889299328757 47 17.775169227716972 27.47098447309126 36.9876521632333 17.766194135958468 48 18.718498608860777 26.68495538434649 36.56476001077011 18.031785996022617 49 19.58990916262394 26.076420544457406 36.221226564382114 18.11244372853654 50 18.37827177522591 26.29123228009844 36.062627245544334 19.267868699131306 51 18.04123346103157 25.47721507626466 35.47275114904793 21.008800313655836 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 453.0 1 1263.5 2 2074.0 3 35852.5 4 69631.0 5 47196.0 6 24761.0 7 24250.5 8 23740.0 9 23680.0 10 23620.0 11 23272.5 12 22925.0 13 22374.0 14 21823.0 15 20648.0 16 19473.0 17 18383.5 18 17294.0 19 16204.0 20 15114.0 21 14409.0 22 13704.0 23 13281.0 24 12858.0 25 12652.5 26 12891.0 27 13335.0 28 13967.0 29 14599.0 30 15631.5 31 16664.0 32 18029.5 33 19395.0 34 21681.0 35 23967.0 36 25941.5 37 27916.0 38 29946.5 39 31977.0 40 34215.0 41 36453.0 42 38333.0 43 40213.0 44 42352.0 45 44491.0 46 47020.0 47 49549.0 48 51122.0 49 52695.0 50 51670.5 51 50646.0 52 45845.5 53 41045.0 54 35660.5 55 30276.0 56 26487.0 57 22698.0 58 19611.0 59 16524.0 60 14308.5 61 12093.0 62 10370.0 63 8647.0 64 6805.5 65 4964.0 66 3859.0 67 2754.0 68 2129.0 69 1504.0 70 1257.0 71 1010.0 72 993.0 73 976.0 74 1025.5 75 975.5 76 876.0 77 609.0 78 342.0 79 225.0 80 108.0 81 86.5 82 65.0 83 38.0 84 11.0 85 6.5 86 2.0 87 1.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 846788.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.20015902833771 #Duplication Level Percentage of deduplicated Percentage of total 1 77.19165741955416 34.89075191024813 2 8.147527108644018 7.365390419968043 3 3.893661478227297 5.279823540551589 4 2.3581961715955413 4.263633679045427 5 1.6711165485174013 3.7767366873936683 6 1.271277976091838 3.447718001314463 7 0.9530489497792051 3.0154574864267216 8 0.7812958248010535 2.825175642334712 9 0.6343263405670182 2.5804486322543454 >10 2.9871313077073958 21.283967205407833 >50 0.07349084026665618 2.3151700178105585 >100 0.03412045388979017 2.858738219132596 >500 0.0020997202390924384 0.6206962842418636 >1k 7.873950896596644E-4 0.48616463547843214 >5k 0.0 0.0 >10k+ 2.624650298865548E-4 4.990127638391726 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 42063 4.967359008394072 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGCC 1971 0.2327619191580419 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGCTTCGTCGTATGC 1090 0.1287217107469638 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1037 0.12246276517853347 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 882 0.10415830172368998 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1809331261189341E-4 0.0 0.0 0.0788863328247448 0.0 2 1.1809331261189341E-4 0.0 0.0 0.24374459723094802 0.0 3 1.1809331261189341E-4 0.0 0.0 0.3943135708111121 0.0 4 1.1809331261189341E-4 0.0 0.0 0.5788934184235015 0.0 5 1.1809331261189341E-4 0.0 0.0 0.9570282054067842 0.0 6 1.1809331261189341E-4 0.0 0.0 1.4980136704818678 0.0 7 1.1809331261189341E-4 0.0 0.0 1.9903446907608515 0.0 8 1.1809331261189341E-4 0.0 0.0 2.6837886224178895 0.0 9 1.1809331261189341E-4 0.0 0.0 3.1305356240286826 0.0 10 2.3618662522378682E-4 0.0 0.0 3.7735537112004423 0.0 11 2.3618662522378682E-4 0.0 0.0 4.913980831093497 0.0 12 2.3618662522378682E-4 0.0 0.0 5.809128140691649 0.0 13 2.3618662522378682E-4 0.0 0.0 6.16033765239942 0.0 14 2.3618662522378682E-4 0.0 0.0 6.296735428466157 0.0 15 2.3618662522378682E-4 0.0 0.0 6.457932800181391 0.0 16 3.5427993783568025E-4 0.0 0.0 6.79213687487305 0.0 17 4.7237325044757365E-4 0.0 0.0 7.258014993126969 0.0 18 4.7237325044757365E-4 0.0 0.0 7.72460167125656 0.0 19 4.7237325044757365E-4 0.0 0.0 8.006018035210703 0.0 20 4.7237325044757365E-4 0.0 0.0 8.277514560905445 0.0 21 4.7237325044757365E-4 0.0 0.0 8.575818268563088 0.0 22 4.7237325044757365E-4 0.0 0.0 8.866209724275734 0.0 23 4.7237325044757365E-4 0.0 0.0 9.118929413265185 0.0 24 4.7237325044757365E-4 0.0 0.0 9.288747596801088 0.0 25 4.7237325044757365E-4 0.0 0.0 9.432349064937151 0.0 26 4.7237325044757365E-4 0.0 0.0 9.551269030737327 0.0 27 4.7237325044757365E-4 0.0 0.0 9.687194433553616 0.0 28 4.7237325044757365E-4 0.0 0.0 9.818041823927596 0.0 29 4.7237325044757365E-4 0.0 0.0 9.963532785065448 0.0 30 4.7237325044757365E-4 0.0 0.0 10.141145127233735 0.0 31 4.7237325044757365E-4 0.0 0.0 10.289588421186885 0.0 32 4.7237325044757365E-4 0.0 0.0 10.450077233026448 0.0 33 4.7237325044757365E-4 0.0 0.0 10.590844461659826 0.0 34 4.7237325044757365E-4 0.0 0.0 10.727360331039174 0.0 35 4.7237325044757365E-4 0.0 0.0 10.89304524863366 0.0 36 5.904665630594671E-4 0.0 0.0 11.02271170588152 0.0 37 5.904665630594671E-4 0.0 0.0 11.156393335758183 0.0 38 7.085598756713605E-4 0.0 0.0 11.314402188032895 0.0 39 7.085598756713605E-4 0.0 0.0 11.503115301586702 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATACGA 20 7.032233E-4 45.0 18 CGTTTTT 27125 0.0 44.46083 1 GCTCTCG 90 0.0 42.5 1 GCGATGC 235 0.0 40.21276 9 GTTTTTT 30565 0.0 40.1415 2 CGGGACG 45 1.9272193E-8 40.0 6 GCGTTTG 160 0.0 39.375 1 GGACCGA 360 0.0 38.75 8 GCCTTCG 35 6.2463387E-6 38.57143 1 CGTTAGG 35 6.2463387E-6 38.57143 2 TGGGCGA 1320 0.0 38.352272 6 CTTCGCG 65 9.094947E-12 38.076927 1 GGGACCG 430 0.0 37.67442 7 AGGCACG 275 0.0 37.636364 10 ATCGTCG 30 1.1396682E-4 37.499996 11 GCGATTC 120 0.0 37.499996 9 GACCGAT 355 0.0 37.394367 9 GCTTTCG 145 0.0 37.24138 1 CTCTGCG 115 0.0 37.173916 1 TTGGGCG 1055 0.0 36.895737 5 >>END_MODULE