##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933705.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2766093 Sequences flagged as poor quality 0 Sequence length 51 %GC 35 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.52584023747575 34.0 31.0 34.0 31.0 34.0 2 32.75043644591849 34.0 31.0 34.0 31.0 34.0 3 32.77552707013105 34.0 31.0 34.0 31.0 34.0 4 36.217326387796795 37.0 37.0 37.0 35.0 37.0 5 36.27898194312339 37.0 37.0 37.0 35.0 37.0 6 36.27293189346851 37.0 37.0 37.0 35.0 37.0 7 36.28526770430351 37.0 37.0 37.0 35.0 37.0 8 36.24748661740585 37.0 37.0 37.0 35.0 37.0 9 38.097655791038115 39.0 39.0 39.0 37.0 39.0 10 37.56264304923949 39.0 38.0 39.0 35.0 39.0 11 37.47419338395347 39.0 37.0 39.0 34.0 39.0 12 37.523171491341756 39.0 37.0 39.0 35.0 39.0 13 37.59576413374388 39.0 37.0 39.0 35.0 39.0 14 39.0130982580846 40.0 38.0 41.0 35.0 41.0 15 39.03801932906811 40.0 39.0 41.0 35.0 41.0 16 39.093033748322995 41.0 39.0 41.0 35.0 41.0 17 39.04980129012293 40.0 39.0 41.0 35.0 41.0 18 38.54744290954787 39.0 38.0 41.0 35.0 41.0 19 38.0184277968962 38.0 37.0 41.0 35.0 41.0 20 37.36209411614143 38.0 35.0 41.0 34.0 41.0 21 37.29919167576795 38.0 35.0 41.0 34.0 41.0 22 37.28017676918311 38.0 35.0 41.0 34.0 41.0 23 37.142027039582544 38.0 35.0 41.0 34.0 41.0 24 37.05163853854516 38.0 35.0 41.0 34.0 41.0 25 37.00135678735314 38.0 35.0 40.0 33.0 41.0 26 36.9949531704104 38.0 35.0 40.0 34.0 41.0 27 36.935135586547524 38.0 35.0 40.0 33.0 41.0 28 36.83340075695214 38.0 35.0 40.0 33.0 41.0 29 36.63259008283525 38.0 35.0 40.0 33.0 41.0 30 36.323325716091254 38.0 35.0 40.0 33.0 41.0 31 35.85307435433299 38.0 35.0 40.0 31.0 41.0 32 35.11334506829669 38.0 35.0 41.0 23.0 41.0 33 33.991722621039855 38.0 34.0 41.0 16.0 41.0 34 33.06121450001862 38.0 33.0 41.0 10.0 41.0 35 32.478274953155946 38.0 31.0 41.0 8.0 41.0 36 32.12102774563256 38.0 31.0 41.0 7.0 41.0 37 31.937214692347656 38.0 30.0 41.0 7.0 41.0 38 31.772012365455534 38.0 29.0 41.0 7.0 41.0 39 31.673515677166314 38.0 29.0 41.0 7.0 41.0 40 31.51749525413643 38.0 27.0 40.0 7.0 41.0 41 31.364368804664196 37.0 25.0 40.0 7.0 41.0 42 31.147052900968983 37.0 24.0 40.0 7.0 41.0 43 31.020082838863335 37.0 23.0 40.0 7.0 41.0 44 30.8638332116816 37.0 23.0 40.0 7.0 41.0 45 30.814002999899134 37.0 23.0 40.0 7.0 41.0 46 30.673877920952044 36.0 23.0 40.0 7.0 41.0 47 30.63957755577994 36.0 23.0 40.0 7.0 41.0 48 30.51720350689583 36.0 23.0 40.0 7.0 41.0 49 30.457210223951254 36.0 23.0 40.0 7.0 41.0 50 30.31095013797439 36.0 22.0 40.0 7.0 41.0 51 29.648097153638723 35.0 20.0 40.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 12.0 10 12.0 11 15.0 12 20.0 13 22.0 14 52.0 15 76.0 16 170.0 17 421.0 18 1011.0 19 2081.0 20 3723.0 21 6261.0 22 10200.0 23 18263.0 24 37053.0 25 81743.0 26 136719.0 27 147794.0 28 120964.0 29 92161.0 30 74925.0 31 68313.0 32 68668.0 33 77346.0 34 111291.0 35 146507.0 36 187652.0 37 227738.0 38 447465.0 39 697036.0 40 371.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 17.015190740152264 3.261929371138281 39.88951203014505 39.83336785856441 2 44.24193257421207 3.1189840688653634 38.6220564529103 14.017026904012267 3 14.573298873175991 3.338282552321994 67.82613599759661 14.262282576905406 4 12.277967515915048 3.450643199632116 67.96568300487365 16.305706279579173 5 12.230644450493891 4.351589046355275 67.65228067169107 15.765485831459753 6 14.65973848312403 5.044479704767699 68.45106075609172 11.844721056016555 7 60.36084108524189 1.428874589538385 35.53846526490613 2.6718190603135903 8 63.10004761228202 1.5030224941822274 33.48361750671434 1.9133123868214121 9 58.573880198532734 4.089197290185109 34.67775667701701 2.6591658342651527 10 24.62802226823176 22.70386425908312 41.68663164976738 10.98148182291774 11 18.06768608286128 19.58394023628273 48.66965788930452 13.678715791551477 12 14.369075804754214 18.638563490092345 52.179807403438716 14.812553301714729 13 15.458518567524665 18.24121604009699 53.27384147966102 13.026423912717325 14 15.366113865296649 18.966968934160928 52.21755016913748 13.449367031404947 15 14.390983961855222 19.393418804067686 52.62050119066857 13.59509604340852 16 15.860131962302063 19.205283408764636 51.37527913920464 13.559305489728654 17 16.076212911134945 18.99368531716034 51.16064427334873 13.769457498355983 18 16.829332925537933 17.904025641943345 51.22398270773976 14.042658724778956 19 16.453423655676076 19.835667130497782 49.810400445682774 13.900508768143371 20 17.553169759657393 20.082730407112127 49.13399513320774 13.230104700022741 21 17.368938788392146 20.679673460002974 49.25383925992365 12.697548491681227 22 17.178489660325955 18.807429829727347 49.48839391878725 14.525686591159445 23 15.059616578329074 20.949331783132383 49.278964951648405 14.712086686890139 24 14.38610343180797 20.74973618023689 50.139818147835236 14.724342240119908 25 14.962512106425924 21.91498984307469 48.79944383648706 14.323054214012327 26 15.242148402096387 21.638064952986035 48.577325491225345 14.54246115369223 27 14.979612037628526 20.983857014207405 49.397724516131596 14.638806432032473 28 14.488160737907222 20.81846127371712 49.58282313718303 15.11055485119264 29 15.314524855093447 20.069426443724055 49.19324838318885 15.422800317993646 30 15.94559546624065 19.75974777420716 49.183884995913004 15.110771763639184 31 16.016055859293235 20.732455488662165 47.498583742484435 15.752904909560165 32 15.706304885627489 21.07731012659372 47.082220301342005 16.13416468643679 33 16.605587736927138 22.19126399582371 44.00365425168279 17.199494015566362 34 16.494709324668406 23.610341373193165 42.451103415539535 17.443845886598897 35 17.040641800546837 24.551741391196895 40.22138807335834 18.18622873489792 36 17.59300934567276 25.7825387649656 38.46258965262556 18.161862236736077 37 18.033413916307225 25.885572177074305 37.97453664790012 18.106477258718343 38 18.437087979326797 26.567761821457196 37.72740106713693 17.267749132079075 39 18.954424164335762 26.287727852968068 36.718722038629934 18.039125944066235 40 19.206151058550816 26.25280494907438 36.7840488371143 17.75699515526051 41 18.51344116051051 26.030216626845153 36.830540404823694 18.625801807820633 42 19.0945496048036 26.235054280532143 36.827033653604566 17.843362461059698 43 18.84701635122174 26.06344038324091 37.065781953101364 18.023761312435987 44 18.805730682229413 26.46592142780449 36.33099104043139 18.397356849534706 45 18.963172966346395 25.857156646576957 36.04726956035101 19.132400826725636 46 18.682669020889755 26.119223034077304 36.15670188963278 19.041406055400163 47 18.048308570969958 26.674012768189648 36.5796450083204 18.69803365252 48 18.383185236360454 26.095073448362005 36.69927222258977 18.822469092687776 49 19.07958264599202 25.46407514136365 36.5510125653765 18.905329647267823 50 18.132795968899092 25.51761636358575 36.5928405154852 19.75674715202996 51 17.844627783664542 25.038818289912886 36.27061707614313 20.845936850279436 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1062.0 1 2936.5 2 4811.0 3 114599.0 4 224387.0 5 148791.0 6 73195.0 7 70944.5 8 68694.0 9 68576.5 10 68459.0 11 68217.5 12 67976.0 13 66168.5 14 64361.0 15 61511.0 16 58661.0 17 55867.5 18 53074.0 19 49999.5 20 46925.0 21 44804.5 22 42684.0 23 41208.5 24 39733.0 25 40070.5 26 41530.5 27 42653.0 28 45408.0 29 48163.0 30 52499.0 31 56835.0 32 62193.0 33 67551.0 34 74549.5 35 81548.0 36 87913.0 37 94278.0 38 102087.5 39 109897.0 40 114489.0 41 119081.0 42 127701.5 43 136322.0 44 142923.0 45 149524.0 46 157470.5 47 165417.0 48 170308.0 49 175199.0 50 169812.5 51 164426.0 52 149268.0 53 134110.0 54 119670.5 55 105231.0 56 93207.0 57 81183.0 58 70718.0 59 60253.0 60 51822.0 61 43391.0 62 36680.0 63 29969.0 64 23937.0 65 17905.0 66 14062.5 67 10220.0 68 8085.5 69 5951.0 70 4787.0 71 3623.0 72 3262.0 73 2901.0 74 2786.0 75 2311.5 76 1952.0 77 1426.5 78 901.0 79 615.0 80 329.0 81 234.0 82 139.0 83 79.0 84 19.0 85 13.0 86 7.0 87 5.0 88 3.0 89 4.0 90 5.0 91 4.5 92 4.0 93 2.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2766093.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.95134970235873 #Duplication Level Percentage of deduplicated Percentage of total 1 75.19954417169092 30.04323286661196 2 8.217300895447572 6.565845233670629 3 3.8528813992024262 4.61783436423748 4 2.521909665119749 4.030147797958299 5 1.7557801191888716 3.5072892771081854 6 1.4258655381621224 3.4179151646194126 7 1.106346927534955 3.094003709585539 8 0.9000054055736811 2.876514455366987 9 0.7418388141403829 2.6673715697854994 >10 4.165663544778824 26.406859555468916 >50 0.06319673050429518 1.760142909807821 >100 0.04446043318943371 3.577758698555173 >500 0.003470903644511746 0.9455284286890322 >1k 0.001552772683065079 1.1089368769768717 >5k 9.133956959206347E-5 0.21373007629252486 >10k+ 9.133956959206347E-5 5.166889015265696 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 141592 5.118844521858087 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCC 5857 0.2117426999019917 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGC 3488 0.12609843559128345 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 3040 0.10990230624928372 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.5306452096874547E-4 0.0 0.0 0.05972322694862393 0.0 2 2.5306452096874547E-4 0.0 0.0 0.1659018695322247 0.0 3 2.5306452096874547E-4 0.0 0.0 0.2729120098275799 0.0 4 2.5306452096874547E-4 0.0 0.0 0.4137243397094747 0.0 5 2.5306452096874547E-4 0.0 0.0 0.7144372947691925 0.0 6 2.5306452096874547E-4 0.0 0.0 1.247535784227067 0.0 7 2.5306452096874547E-4 0.0 0.0 1.7677641351899593 0.0 8 2.5306452096874547E-4 0.0 0.0 2.4875157848994953 0.0 9 2.5306452096874547E-4 0.0 0.0 2.999320702521571 0.0 10 2.8921659539285195E-4 0.0 0.0 3.616725829536462 0.0 11 2.8921659539285195E-4 0.0 0.0 4.46423891026079 0.0 12 3.2536866981695844E-4 0.0 0.0 5.156008854366068 0.0 13 3.2536866981695844E-4 0.0 0.0 5.4797145287595175 0.0 14 3.2536866981695844E-4 0.0 0.0 5.649701582701666 0.0 15 3.6152074424106493E-4 0.0 0.0 5.791815387262829 0.0 16 3.6152074424106493E-4 0.0 0.0 6.007860184021289 0.0 17 3.976728186651714E-4 0.0 0.0 6.27954302331845 0.0 18 3.976728186651714E-4 0.0 0.0 6.5797136972618055 0.0 19 3.976728186651714E-4 0.0 0.0 6.782924507599708 0.0 20 4.699769675133844E-4 0.0 0.0 6.985376124374705 0.0 21 4.699769675133844E-4 0.0 0.0 7.202360875068192 0.0 22 5.061290419374909E-4 0.0 0.0 7.420249427622282 0.0 23 5.061290419374909E-4 0.0 0.0 7.63108832566367 0.0 24 5.061290419374909E-4 0.0 0.0 7.797640932535529 0.0 25 5.061290419374909E-4 0.0 0.0 7.956348539257357 0.0 26 5.061290419374909E-4 0.0 0.0 8.113393150555675 0.0 27 5.061290419374909E-4 0.0 0.0 8.27481216285931 0.0 28 5.422811163615974E-4 0.0 0.0 8.444835368875884 0.0 29 5.422811163615974E-4 0.0 0.0 8.630837791787911 0.0 30 5.422811163615974E-4 0.0 0.0 8.855450630184885 0.0 31 5.784331907857039E-4 0.0 0.0 9.035524112891359 0.0 32 6.145852652098103E-4 0.0 0.0 9.234866651265882 0.0 33 6.507373396339169E-4 0.0 0.0 9.427593360020795 0.0 34 6.868894140580233E-4 0.0 0.0 9.615294930430755 0.0 35 6.868894140580233E-4 0.0 0.0 9.829568275542435 0.0 36 6.868894140580233E-4 0.0 0.0 10.022367288446194 0.0 37 7.230414884821299E-4 0.0 0.0 10.237833652013869 0.0 38 7.591935629062363E-4 0.0 0.0 10.466423218597495 0.0 39 7.953456373303428E-4 0.0 0.0 10.758568132018699 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 83555 0.0 44.48028 1 GTTTTTT 94400 0.0 39.873146 2 TACGGGA 385 0.0 39.15584 4 GCTTACG 65 9.094947E-12 38.07692 1 CGAACGA 25 0.0021076205 35.999996 22 TTGGGAC 5445 0.0 35.619835 5 TGGGCGA 4330 0.0 35.594685 6 TTGGGCG 3410 0.0 35.300587 5 CTGCGCG 225 0.0 35.0 1 CGTTTGG 1320 0.0 34.772728 2 TTCGTCG 130 0.0 34.615383 1 GGGCGAT 6715 0.0 34.378258 7 CGGGATA 860 0.0 34.273254 6 GGACCGA 1150 0.0 34.239132 8 TCTTGCG 625 0.0 34.2 1 AGGCACG 645 0.0 34.186047 10 GCGAGAC 810 0.0 34.166664 21 TCTGGGA 6000 0.0 34.1625 4 TATCCGG 145 0.0 34.137928 2 ACGGGCG 165 0.0 34.090908 5 >>END_MODULE