##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933703.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 905989 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.088087162206165 33.0 31.0 34.0 30.0 34.0 2 32.29804445749341 34.0 31.0 34.0 30.0 34.0 3 32.424929000241725 34.0 31.0 34.0 30.0 34.0 4 35.9365422758996 37.0 35.0 37.0 35.0 37.0 5 36.01931370027671 37.0 35.0 37.0 35.0 37.0 6 36.01483682472966 37.0 35.0 37.0 35.0 37.0 7 36.02772219088753 37.0 35.0 37.0 35.0 37.0 8 35.92678167174215 37.0 35.0 37.0 35.0 37.0 9 37.739423988591476 39.0 38.0 39.0 35.0 39.0 10 36.999269306801736 39.0 37.0 39.0 32.0 39.0 11 37.03480174704108 39.0 37.0 39.0 33.0 39.0 12 37.16341258006444 39.0 37.0 39.0 34.0 39.0 13 37.23172135644031 39.0 37.0 39.0 34.0 39.0 14 38.42958578967294 40.0 38.0 41.0 34.0 41.0 15 38.449639013277206 40.0 38.0 41.0 34.0 41.0 16 38.57143850532402 40.0 38.0 41.0 34.0 41.0 17 38.60047638547488 40.0 38.0 41.0 34.0 41.0 18 38.360513207113996 39.0 38.0 41.0 34.0 41.0 19 38.05346864034773 39.0 37.0 41.0 34.0 41.0 20 37.55495486148286 39.0 35.0 41.0 34.0 41.0 21 37.47067900382896 39.0 35.0 40.0 34.0 41.0 22 37.47451569500292 39.0 35.0 40.0 34.0 41.0 23 37.34505165073748 39.0 35.0 40.0 33.0 41.0 24 37.27392164805533 39.0 35.0 40.0 33.0 41.0 25 37.210694611082474 39.0 35.0 40.0 33.0 41.0 26 37.20856323862652 39.0 35.0 40.0 33.0 41.0 27 37.15724914982412 39.0 35.0 40.0 33.0 41.0 28 37.11453671071062 39.0 35.0 40.0 33.0 41.0 29 36.95298728792513 39.0 35.0 40.0 33.0 41.0 30 36.68429086887368 39.0 35.0 40.0 32.0 41.0 31 36.32309222297401 39.0 35.0 40.0 31.0 41.0 32 35.836743050964195 39.0 35.0 40.0 28.0 41.0 33 35.083584900037415 39.0 35.0 41.0 21.0 41.0 34 34.528619000892945 39.0 35.0 41.0 16.0 41.0 35 34.15846881143148 39.0 34.0 41.0 14.0 41.0 36 33.885620024084176 39.0 34.0 41.0 10.0 41.0 37 33.74618014125999 39.0 34.0 41.0 10.0 41.0 38 33.66063053745685 39.0 33.0 41.0 10.0 41.0 39 33.6024466080714 39.0 33.0 41.0 10.0 41.0 40 33.502274310173746 39.0 33.0 40.0 10.0 41.0 41 33.35159367277086 38.0 33.0 40.0 10.0 41.0 42 33.07388169172032 38.0 33.0 40.0 10.0 41.0 43 32.98066974323088 38.0 33.0 40.0 10.0 41.0 44 32.965033791801005 38.0 32.0 40.0 10.0 41.0 45 32.978861774259954 38.0 32.0 40.0 9.0 41.0 46 32.749904248285574 38.0 31.0 40.0 8.0 41.0 47 32.652936183551894 38.0 31.0 40.0 8.0 41.0 48 32.5083836558722 38.0 31.0 40.0 8.0 41.0 49 32.507239050363744 38.0 31.0 40.0 8.0 41.0 50 32.35378023353484 38.0 31.0 40.0 8.0 41.0 51 31.44101308073277 36.0 28.0 40.0 8.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 3.0 12 6.0 13 10.0 14 10.0 15 15.0 16 33.0 17 94.0 18 281.0 19 567.0 20 1089.0 21 1758.0 22 3065.0 23 5579.0 24 11124.0 25 22520.0 26 34189.0 27 32530.0 28 25423.0 29 19789.0 30 18170.0 31 19317.0 32 22264.0 33 28534.0 34 41098.0 35 53161.0 36 71211.0 37 101950.0 38 189235.0 39 202903.0 40 57.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.015916308034644 4.317602090091602 45.39845406511558 30.268027536758176 2 35.96268828870991 4.215172590395689 43.650309220089866 16.171829900804536 3 16.590709158720472 4.110756311610848 61.3793324201508 17.919202109517887 4 13.747186775998385 4.36694043746668 62.09953983988768 19.786332946647256 5 12.587349294527858 5.349733826790391 63.0186459217496 19.04427095693215 6 16.09831907451415 6.36144588951963 64.91050112087453 12.629733915091684 7 66.9604156341854 1.6703293307093132 27.22052916757268 4.148725867532608 8 67.7563414125337 1.981370634742806 25.38463491278592 4.877653039937571 9 61.77448070561563 4.985380617203962 28.052879229218014 5.187259447962393 10 27.25894022995864 19.13654580795131 37.971873830697724 15.632640131392323 11 18.896035161574808 20.68457784807542 40.1949692545936 20.224417735756173 12 14.882851778553603 17.41422909108168 47.46282791512921 20.240091215235505 13 18.465014475893195 18.45508058044855 48.79827459273788 14.281630350920373 14 17.700104526655398 20.08534319953112 46.60972704966617 15.604825224147312 15 14.26639837790525 20.232475228727942 47.88711562723167 17.61401076613513 16 13.596743448320012 19.809180906169942 46.27462364333342 20.31945200217663 17 13.842772925499094 20.388437387208896 44.27504086694209 21.493748820349918 18 14.999740614952279 18.666120670339264 47.2691169539586 19.065021760749854 19 15.199191160157573 22.077530742646985 46.1751743122709 16.548103784924542 20 15.41784723655585 23.15944233318506 44.44656612828632 16.976144301972763 21 14.580199097340035 24.455484558863297 44.54104851162652 16.423267832170147 22 13.857894521898167 22.05755257514164 42.861447545168865 21.22310535779132 23 12.736247349581506 23.3585617485422 41.52721501033677 22.377975891539524 24 13.351486607453293 22.33117620633363 42.80647999037516 21.510857195837918 25 12.779294229841643 24.22126537960174 41.21981613463298 21.77962425592364 26 12.907662234309688 24.77943992697483 43.351519720438105 18.961378118277374 27 14.224896770269838 23.692340635482328 43.21586685931065 18.866895734937177 28 12.830508979689597 21.654126043472935 43.705718281347785 21.809646695489683 29 14.125116309359164 19.98710801124517 43.183526510807525 22.704249168588138 30 17.613017376590665 21.354895037356965 40.572236528258074 20.4598510577943 31 16.203839119459506 24.646436104632617 36.83808523061538 22.31163954529249 32 14.932631632392887 23.827993496609782 37.759067714950184 23.480307156047147 33 17.278465853338176 20.702679613107886 36.43002288107251 25.58883165248143 34 17.524053824053052 19.571098545346576 36.559494651701065 26.3453529788993 35 17.77935493698047 19.063034981660927 37.98776806340916 25.169842017949446 36 18.211700142054703 20.519785560310336 36.64845820423868 24.62005609339628 37 18.545368652378784 21.80423824130315 34.37679706928009 25.273596037037976 38 19.055639748385467 21.402356982259167 36.25430330831831 23.287699961037053 39 20.688220276405122 19.61944350317719 39.29495832730861 20.397377893109077 40 25.19853993812287 19.080143357148927 36.4056296489251 19.315687055803103 41 24.927454969100065 20.011280490160477 33.291022297180206 21.77024224355925 42 22.350602490758718 19.910837769553495 36.288188929446164 21.450370810241626 43 18.59205796096862 19.361824481312688 39.31670252067078 22.72941503704791 44 18.412033700188413 19.71083534126794 36.257283476951706 25.61984748159194 45 21.916160129979502 18.385322559103916 35.51235169521926 24.186165615697323 46 24.200073069319828 19.50299617324272 35.359369705371705 20.937561052065753 47 20.866478511328506 21.720020883255756 36.66269678770934 20.750803817706394 48 19.694389225476247 20.690096678878 38.45179135729021 21.163722738355542 49 22.22532503154012 17.700877162967764 38.62662791711599 21.447169888376127 50 21.595405683733468 16.98331878201612 35.83056747929611 25.59070805495431 51 20.420005099399663 16.928351227222404 33.34190591718001 29.309737756197922 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 302.0 1 803.0 2 1304.0 3 18543.5 4 35783.0 5 24614.0 6 13445.0 7 13321.5 8 13198.0 9 13533.5 10 13869.0 11 14195.5 12 14522.0 13 14411.0 14 14300.0 15 13816.5 16 13333.0 17 12803.5 18 12274.0 19 11577.5 20 10881.0 21 10572.5 22 10264.0 23 9711.0 24 9158.0 25 8956.5 26 8721.5 27 8688.0 28 9098.0 29 9508.0 30 10071.5 31 10635.0 32 11437.5 33 12240.0 34 14313.5 35 16387.0 36 18133.5 37 19880.0 38 22869.5 39 25859.0 40 30089.0 41 34319.0 42 41298.5 43 48278.0 44 58309.0 45 68340.0 46 83108.0 47 97876.0 48 108908.5 49 119941.0 50 112391.5 51 104842.0 52 84133.5 53 63425.0 54 49917.5 55 36410.0 56 28794.0 57 21178.0 58 17608.0 59 14038.0 60 11642.5 61 9247.0 62 7338.5 63 5430.0 64 4512.5 65 3595.0 66 2881.0 67 2167.0 68 1635.5 69 1104.0 70 803.0 71 502.0 72 397.5 73 293.0 74 237.0 75 161.0 76 141.0 77 93.0 78 45.0 79 36.5 80 28.0 81 22.5 82 17.0 83 9.0 84 1.0 85 0.5 86 0.0 87 2.0 88 4.0 89 3.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 905989.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.484482673381905 #Duplication Level Percentage of deduplicated Percentage of total 1 76.28975936185302 34.70000237850678 2 9.55163756205091 8.689025863870569 3 4.2415062231379155 5.7876814894607405 4 2.440204058583184 4.439656768885722 5 1.629129586765346 3.7050058230961103 6 1.148502958147888 3.1343437740123283 7 0.8712108937234919 2.7738603760299414 8 0.6488113197331086 2.3608677784555696 9 0.5209930751402432 2.132739044925151 >10 2.4746006780465093 18.50574839080429 >50 0.11706495982679739 3.6060980932531175 >100 0.0624333578265935 5.329632013943321 >500 0.0021949227343729264 0.6775463582163691 >1k 0.0017071621267344982 1.7197120483674475 >5k 0.0 0.0 >10k+ 2.4388030381921407E-4 2.4380797981724913 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 21979 2.4259676441987708 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCC 3933 0.4341112309310599 No Hit CTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTCTGCT 2737 0.3021007981333107 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTCTGC 2355 0.2599369308015881 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGC 2181 0.2407313996086045 No Hit TCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTCTGC 1829 0.20187883075843083 No Hit GCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTCTGC 1436 0.15850082065014034 No Hit CGCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTCTG 1032 0.11390866776528191 No Hit TTCCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTCT 930 0.10265025292801569 No Hit TCCTGTCTCTTATACACATCTGACGCTCCTTGGTTCGTATGCCGTCTTCTG 925 0.10209836984775753 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.415064642065191E-4 0.0 0.0 0.3204233163978812 0.0 2 4.415064642065191E-4 0.0 0.0 1.0000121414277656 0.0 3 4.415064642065191E-4 0.0 0.0 1.5113870035949664 0.0 4 4.415064642065191E-4 0.0 0.0 2.24781978589144 0.0 5 4.415064642065191E-4 0.0 0.0 3.856227834995789 0.0 6 4.415064642065191E-4 0.0 0.0 5.566513500715792 0.0 7 4.415064642065191E-4 0.0 0.0 7.11862947563381 0.0 8 4.415064642065191E-4 0.0 0.0 9.62108811475636 0.0 9 4.415064642065191E-4 0.0 0.0 10.906975691757847 0.0 10 4.415064642065191E-4 0.0 0.0 13.37378268389572 0.0 11 4.415064642065191E-4 0.0 0.0 18.29393072101317 0.0 12 4.415064642065191E-4 0.0 0.0 22.374554216441922 0.0 13 4.415064642065191E-4 0.0 0.0 23.857905559559775 0.0 14 4.415064642065191E-4 0.0 0.0 24.395108549883055 0.0 15 4.415064642065191E-4 0.0 0.0 25.0517390387742 0.0 16 4.415064642065191E-4 0.0 0.0 26.795799949006003 0.0 17 4.415064642065191E-4 0.0 0.0 29.25951639589443 0.0 18 4.415064642065191E-4 0.0 0.0 31.652260678661662 0.0 19 4.415064642065191E-4 0.0 0.0 33.05238805327659 0.0 20 4.415064642065191E-4 0.0 0.0 34.26344028459507 0.0 21 4.415064642065191E-4 0.0 0.0 35.67261854172622 0.0 22 4.415064642065191E-4 0.0 0.0 36.86170582645043 0.0 23 4.415064642065191E-4 0.0 0.0 37.84085678744444 0.0 24 4.415064642065191E-4 0.0 0.0 38.43887729321217 0.0 25 4.415064642065191E-4 0.0 0.0 38.8573150446639 0.0 26 4.415064642065191E-4 0.0 0.0 39.18138078939148 0.0 27 4.415064642065191E-4 0.0 0.0 39.483923093989 0.0 28 5.518830802581488E-4 0.0 0.0 39.75887124457361 0.0 29 5.518830802581488E-4 0.0 0.0 40.03260525238165 0.0 30 6.622596963097786E-4 0.0 0.0 40.313734493465155 0.0 31 7.726363123614084E-4 0.0 0.0 40.561640373117115 0.0 32 8.830129284130381E-4 0.0 0.0 40.802261396109664 0.0 33 8.830129284130381E-4 0.0 0.0 41.041447523093545 0.0 34 8.830129284130381E-4 0.0 0.0 41.26628468999072 0.0 35 9.93389544464668E-4 0.0 0.0 41.50447742743013 0.0 36 9.93389544464668E-4 0.0 0.0 41.73295702265701 0.0 37 9.93389544464668E-4 0.0 0.0 41.992121317146236 0.0 38 9.93389544464668E-4 0.0 0.0 42.2334045998351 0.0 39 0.0011037661605162977 0.0 0.0 42.49841885497506 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGTACG 25 3.890149E-5 45.000004 1 CGTTAGG 50 2.1827873E-11 45.000004 2 CTACGAA 25 3.890149E-5 45.000004 11 CCGGCGG 20 7.032494E-4 45.0 2 TACGAAT 20 7.032494E-4 45.0 12 TCGCTAG 20 7.032494E-4 45.0 1 CGTTTTT 17590 0.0 44.53951 1 TTGCGCG 85 0.0 42.352943 1 GTCTTCG 55 6.002665E-11 40.909092 1 CTGTGCG 55 6.002665E-11 40.909092 1 TGTACGG 50 1.0804797E-9 40.500004 2 CGTCTGG 95 0.0 40.263157 2 ATGGGCG 45 1.927583E-8 40.0 5 GTTTTTT 20185 0.0 39.604904 2 TATCGGG 40 3.457135E-7 39.375 3 TACGGGA 120 0.0 39.374996 4 GCGGGCA 235 0.0 38.29787 5 GGACCGA 290 0.0 38.01724 8 TAGCGGG 95 0.0 37.894737 3 GACCGAT 285 0.0 37.894737 9 >>END_MODULE