##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933697.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 821166 Sequences flagged as poor quality 0 Sequence length 51 %GC 36 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27870247915769 33.0 31.0 34.0 30.0 34.0 2 32.51256871326869 34.0 31.0 34.0 31.0 34.0 3 32.566638170601315 34.0 31.0 34.0 31.0 34.0 4 36.06912487852639 37.0 35.0 37.0 35.0 37.0 5 36.13913508352757 37.0 35.0 37.0 35.0 37.0 6 36.135173643331555 37.0 36.0 37.0 35.0 37.0 7 36.137828404975366 37.0 36.0 37.0 35.0 37.0 8 36.040287834615654 37.0 37.0 37.0 35.0 37.0 9 37.85586227388859 39.0 38.0 39.0 35.0 39.0 10 37.347418183412366 39.0 37.0 39.0 34.0 39.0 11 37.28051210108553 39.0 37.0 39.0 34.0 39.0 12 37.39929076459571 39.0 37.0 39.0 34.0 39.0 13 37.45289381196981 39.0 37.0 39.0 35.0 39.0 14 38.71142497375683 40.0 38.0 41.0 35.0 41.0 15 38.72536490794797 40.0 38.0 41.0 34.0 41.0 16 38.8320692771011 40.0 38.0 41.0 35.0 41.0 17 38.838535691930744 40.0 38.0 41.0 35.0 41.0 18 38.40757654359776 39.0 38.0 40.0 35.0 41.0 19 37.93508377112545 38.0 37.0 40.0 35.0 41.0 20 37.28440047444731 38.0 35.0 40.0 34.0 41.0 21 37.20002167649415 38.0 35.0 40.0 34.0 41.0 22 37.189934800028254 38.0 35.0 40.0 34.0 41.0 23 37.05630652024073 38.0 35.0 40.0 33.0 41.0 24 36.9434523592063 38.0 35.0 40.0 33.0 41.0 25 36.88449594844404 38.0 35.0 40.0 33.0 41.0 26 36.888346570608135 38.0 35.0 40.0 33.0 41.0 27 36.817830986670174 38.0 35.0 40.0 33.0 41.0 28 36.72383537555135 38.0 35.0 40.0 33.0 41.0 29 36.52173007650097 38.0 35.0 40.0 33.0 41.0 30 36.18069671662003 38.0 35.0 40.0 31.0 41.0 31 35.66789053614007 38.0 35.0 40.0 30.0 41.0 32 34.95944425365882 38.0 35.0 40.0 23.0 41.0 33 33.92185014966523 38.0 34.0 40.0 16.0 41.0 34 33.10824607935545 38.0 33.0 40.0 10.0 41.0 35 32.59407963797819 38.0 32.0 40.0 8.0 41.0 36 32.24349400730181 38.0 31.0 40.0 8.0 41.0 37 32.05568910549146 38.0 30.0 40.0 7.0 41.0 38 31.882562112898 38.0 30.0 40.0 7.0 41.0 39 31.82931343966993 38.0 30.0 40.0 7.0 41.0 40 31.683174900081106 38.0 29.0 40.0 7.0 41.0 41 31.458328766656194 37.0 27.0 40.0 7.0 41.0 42 31.201752142684914 37.0 26.0 40.0 7.0 41.0 43 31.11225379521315 37.0 25.0 40.0 7.0 41.0 44 31.036349532250483 37.0 24.0 40.0 7.0 41.0 45 31.01025614796521 37.0 24.0 40.0 7.0 41.0 46 30.75921068334539 37.0 23.0 40.0 7.0 41.0 47 30.649908788235265 36.0 23.0 40.0 7.0 41.0 48 30.50193261776547 36.0 23.0 40.0 7.0 41.0 49 30.49486827267568 36.0 23.0 40.0 7.0 41.0 50 30.329609360348577 36.0 23.0 40.0 7.0 41.0 51 29.419395104034994 35.0 21.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 4.0 11 7.0 12 9.0 13 16.0 14 14.0 15 33.0 16 46.0 17 137.0 18 307.0 19 605.0 20 1160.0 21 2036.0 22 3474.0 23 6105.0 24 12176.0 25 25615.0 26 39777.0 27 40874.0 28 32224.0 29 24424.0 30 20963.0 31 20361.0 32 21741.0 33 25548.0 34 35291.0 35 48167.0 36 64550.0 37 82740.0 38 149620.0 39 163068.0 40 68.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 13.834596171785 4.074693789075534 40.81720382967634 41.27350620946313 2 41.94730419915096 3.804833614640645 39.14007642790861 15.107785758299782 3 13.54598217656357 3.7127694035067207 66.33421257090527 16.40703584902444 4 12.140663398143616 3.8596337403156005 65.9899460036095 18.009756857931283 5 11.767413653268646 4.284030269153861 66.03220298940774 17.91635308816975 6 14.815031309138469 4.895234337515192 67.80590039042045 12.483833962925889 7 59.92917388201655 1.3310341636161265 34.932766334699686 3.8070256196676437 8 60.680909828219875 1.7539693557697227 33.399824152485614 4.165296663524793 9 55.23950090481097 4.666048034136825 35.542630844433404 4.5518202166188075 10 23.409761241941336 23.258634673135518 41.45215461916349 11.879449465759663 11 15.505391114585846 17.77825677146886 50.00840268593683 16.70794942800847 12 13.96258490975028 15.527676499026994 53.231746078137675 17.277992513085053 13 16.402895395084553 15.807644252197486 54.53647618142982 13.252984171288142 14 14.997211282493431 17.736121563727675 53.09072708806746 14.17594006571144 15 11.668286314825504 18.145904725719284 54.222045238112635 15.963763721342577 16 12.277785490388057 18.34744741014606 52.387580586629255 16.987186512836626 17 12.629724075278324 18.067114322804404 50.87278333491645 18.430378267000826 18 13.46767888587691 17.349719788690717 52.63637315719355 16.546228168238823 19 13.406424523178018 19.766405330956225 52.37942145680654 14.447748689059217 20 13.62525969170667 21.567259238692298 50.002192005027 14.805289064574032 21 13.025746316822664 22.279782650523767 50.22650718612315 14.467963846530422 22 12.239303624358534 20.57976097402961 49.32449711751339 17.856438284098463 23 11.268854287683611 21.690011520204198 48.035719939695504 19.005414252416685 24 11.58803457522596 21.34233516731087 48.76943273345463 18.300197524008542 25 11.529946442010507 22.710146304157746 47.19411178738525 18.56579546644649 26 11.721503325758738 23.005458092517227 48.067869346758144 17.20516923496589 27 12.288501959408938 22.057172362226396 49.423380899842414 16.230944778522247 28 11.293697011322925 20.862651400569433 49.375765679533735 18.467885908573905 29 12.43475740593254 18.862325035376525 48.53233085636765 20.17058670232328 30 15.793761553693164 20.08595095266974 46.194801051188186 17.925486442448907 31 14.645272697603165 23.92208152797364 43.04148004179423 18.39116573262897 32 13.313751421758816 23.866916068127516 41.78083359515616 21.03849891495751 33 15.397495756034713 22.304990708334245 38.85925622833873 23.43825730729231 34 15.35438632383708 22.718792546208682 38.04784903417823 23.878972095776007 35 14.510099054271608 22.54172725125005 38.53410881600066 24.414064878477674 36 14.999037953349262 25.15264879451901 36.57153364849495 23.27677960363678 37 15.604274896914875 28.14802366391205 34.576565517812476 21.6711359213606 38 15.31773112866339 27.084535891646755 34.44711544316253 23.150617536527328 39 17.1529264484891 24.7215544725427 33.209485049307936 24.916034029660263 40 20.31099680210822 22.705640516046692 35.389312270600584 21.5940504112445 41 18.71753092553759 24.009639950996508 36.905449080941004 20.367380042524896 42 17.541642006610115 26.98784411434472 36.786837253368994 18.683676625676174 43 16.37963578618696 26.4928163124143 37.14133317745742 19.986214723941323 44 16.99534564265934 24.731053160993028 34.738895667867396 23.534705528480234 45 19.398757376705806 22.45124615485785 33.815452661215886 24.334543807220467 46 20.399894783758704 22.970629568199367 35.48320315259034 21.14627249545159 47 17.04515286799502 25.79551515771476 37.09590996217574 20.063422012114483 48 16.257735951074448 25.327034972222425 37.602141345355264 20.813087731347863 49 19.236427226650886 22.468295082845614 37.08580238344013 21.20947530706337 50 18.707545124859042 20.902229269112457 36.07236539262463 24.317860213403865 51 17.337663761042226 20.487696762895688 34.91425607002726 27.260383406034833 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 654.0 1 1370.0 2 2086.0 3 29783.5 4 57481.0 5 38564.5 6 19648.0 7 19450.5 8 19253.0 9 19439.5 10 19626.0 11 19557.5 12 19489.0 13 19152.5 14 18816.0 15 17953.0 16 17090.0 17 16134.0 18 15178.0 19 14317.5 20 13457.0 21 12584.5 22 11712.0 23 11170.0 24 10628.0 25 10441.0 26 10169.0 27 10084.0 28 10223.0 29 10362.0 30 11131.5 31 11901.0 32 13017.0 33 14133.0 34 15600.0 35 17067.0 36 18279.0 37 19491.0 38 21322.0 39 23153.0 40 25923.5 41 28694.0 42 33493.5 43 38293.0 44 44149.5 45 50006.0 46 60384.5 47 70763.0 48 79257.0 49 87751.0 50 83876.5 51 80002.0 52 65052.0 53 50102.0 54 39209.5 55 28317.0 56 22184.0 57 16051.0 58 13303.0 59 10555.0 60 8897.5 61 7240.0 62 5926.5 63 4613.0 64 3836.0 65 3059.0 66 2487.5 67 1916.0 68 1438.0 69 960.0 70 717.0 71 474.0 72 411.0 73 348.0 74 256.0 75 167.0 76 170.0 77 108.0 78 46.0 79 49.0 80 52.0 81 32.5 82 13.0 83 12.0 84 11.0 85 5.5 86 0.0 87 0.5 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 821166.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.99107949972252 #Duplication Level Percentage of deduplicated Percentage of total 1 77.88644930420962 37.378547805094314 2 9.210587882871916 8.840521106521742 3 4.011460216833098 5.775429185280339 4 2.338972039351472 4.489991723525785 5 1.5473314828060962 3.7129054101885446 6 1.049478802607009 3.0219372389511943 7 0.7399495318107354 2.4857683764838017 8 0.5695101012797642 2.1865123637129753 9 0.4339465515466482 1.8743007108515064 >10 2.0558027552882003 16.35722425244773 >50 0.10655028873699793 3.556543246236433 >100 0.04460807380283741 3.6556123484387646 >500 0.0038235491825888775 1.1192048112004083 >1k 0.0012745163941962924 1.0873987940496699 >5k 0.0 0.0 >10k+ 2.549032788392585E-4 4.458102627016776 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 36443 4.437957733271957 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCACCGTATCGTATGCC 3377 0.4112444986762725 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTCACCGTATCGTATGC 1769 0.21542538293110042 No Hit CCTGTCTCTTATACACATCTGACGCTCACCGTATCGTATGCCGTCTTCTGC 1601 0.1949666693457839 TruSeq Adapter, Index 14 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCTCACCGTATCGTATGCCGTCTTCTG 1097 0.13359052858983445 No Hit CTGTCTCTTATACACATCTGACGCTCACCGTATCGTATGCCGTCTTCTGCT 1045 0.12725806962295078 Illumina Paired End PCR Primer 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTCACCGTATCGTATGCCGTCTTCTGC 955 0.11629804448795981 TruSeq Adapter, Index 14 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.4355611411091058E-4 0.0 0.0 0.13870520698616357 0.0 2 2.4355611411091058E-4 0.0 0.0 0.550193261776547 0.0 3 2.4355611411091058E-4 0.0 0.0 0.9437799421797786 0.0 4 2.4355611411091058E-4 0.0 0.0 1.5439022073490622 0.0 5 2.4355611411091058E-4 0.0 0.0 2.817457128035014 0.0 6 2.4355611411091058E-4 0.0 0.0 4.255534203802886 0.0 7 2.4355611411091058E-4 0.0 0.0 5.693976613741923 0.0 8 2.4355611411091058E-4 0.0 0.0 7.930308853508304 0.0 9 2.4355611411091058E-4 0.0 0.0 9.30798401297667 0.0 10 2.4355611411091058E-4 0.0 0.0 11.281032093389156 0.0 11 2.4355611411091058E-4 0.0 0.0 15.416127798764196 0.0 12 2.4355611411091058E-4 0.0 0.0 18.952440797597564 0.0 13 2.4355611411091058E-4 0.0 0.0 20.21491391509147 0.0 14 2.4355611411091058E-4 0.0 0.0 20.663544277283766 0.0 15 2.4355611411091058E-4 0.0 0.0 21.189990817934497 0.0 16 2.4355611411091058E-4 0.0 0.0 22.42384609202037 0.0 17 2.4355611411091058E-4 0.0 0.0 24.121675763487527 0.0 18 2.4355611411091058E-4 0.0 0.0 25.77310799521656 0.0 19 2.4355611411091058E-4 0.0 0.0 26.78484009323328 0.0 20 2.4355611411091058E-4 0.0 0.0 27.716685785821625 0.0 21 2.4355611411091058E-4 0.0 0.0 28.80793895509556 0.0 22 2.4355611411091058E-4 0.0 0.0 29.76535803966555 0.0 23 2.4355611411091058E-4 0.0 0.0 30.50893485604616 0.0 24 2.4355611411091058E-4 0.0 0.0 30.951232759271573 0.0 25 2.4355611411091058E-4 0.0 0.0 31.2699259345857 0.0 26 2.4355611411091058E-4 0.0 0.0 31.533453650053705 0.0 27 2.4355611411091058E-4 0.0 0.0 31.787360899014327 0.0 28 3.653341711663659E-4 0.0 0.0 32.01727787073503 0.0 29 3.653341711663659E-4 0.0 0.0 32.252187742795 0.0 30 3.653341711663659E-4 0.0 0.0 32.497083415533524 0.0 31 3.653341711663659E-4 0.0 0.0 32.70422789058485 0.0 32 3.653341711663659E-4 0.0 0.0 32.89724611101775 0.0 33 3.653341711663659E-4 0.0 0.0 33.080400308829155 0.0 34 3.653341711663659E-4 0.0 0.0 33.26367628469761 0.0 35 3.653341711663659E-4 0.0 0.0 33.44634337028079 0.0 36 4.8711222822182116E-4 0.0 0.0 33.6204859918701 0.0 37 6.088902852772765E-4 0.0 0.0 33.80205707493978 0.0 38 6.088902852772765E-4 0.0 0.0 33.98837750223463 0.0 39 7.306683423327318E-4 0.0 0.0 34.21732024949888 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGGCG 20 7.0321077E-4 45.000004 1 ATTCGCG 20 7.0321077E-4 45.000004 1 CGCCTCG 20 7.0321077E-4 45.000004 1 CTATGCG 25 3.88983E-5 45.0 1 GATCGGA 25 3.88983E-5 45.0 9 TCGATGA 25 3.88983E-5 45.0 38 TACGAAT 50 2.1827873E-11 45.0 12 TGGTCCG 25 3.88983E-5 45.0 1 CTCGATG 30 2.164741E-6 44.999996 37 CGTTTTT 22495 0.0 44.45988 1 TCTTGCG 130 0.0 43.269234 1 TACGGGA 100 0.0 42.75 4 TCTCTCG 60 3.6379788E-12 41.249996 1 GGCACGT 55 6.002665E-11 40.909092 11 CGAATAT 55 6.002665E-11 40.909092 14 TGTACGG 50 1.0804797E-9 40.5 2 GTTTTTT 25460 0.0 39.95385 2 TTTCGCG 85 0.0 39.705883 1 CTCTCCG 40 3.4566074E-7 39.375004 1 ACGGGTA 35 6.2461113E-6 38.571426 5 >>END_MODULE