##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933693.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2123670 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.86401559564339 33.0 31.0 34.0 30.0 34.0 2 32.11856456040722 34.0 31.0 34.0 30.0 34.0 3 32.26128918334769 34.0 31.0 34.0 30.0 34.0 4 35.8287426954282 37.0 35.0 37.0 35.0 37.0 5 35.91453709851342 37.0 35.0 37.0 35.0 37.0 6 35.91926240894301 37.0 35.0 37.0 35.0 37.0 7 35.90089514849294 37.0 35.0 37.0 35.0 37.0 8 35.760518347954246 37.0 35.0 37.0 35.0 37.0 9 37.552905112376216 39.0 37.0 39.0 35.0 39.0 10 36.91390564447396 39.0 37.0 39.0 32.0 39.0 11 36.989534155494965 39.0 37.0 39.0 33.0 39.0 12 37.13964081048374 39.0 37.0 39.0 34.0 39.0 13 37.18455503915392 39.0 37.0 39.0 34.0 39.0 14 38.28691840069314 40.0 38.0 41.0 34.0 41.0 15 38.29175578126545 40.0 38.0 41.0 34.0 41.0 16 38.426919436635636 40.0 38.0 41.0 34.0 41.0 17 38.47432039817863 40.0 38.0 41.0 34.0 41.0 18 38.259572814985376 39.0 38.0 40.0 34.0 41.0 19 37.96980133448229 39.0 37.0 40.0 34.0 41.0 20 37.46004699411867 39.0 35.0 40.0 34.0 41.0 21 37.366619578371406 39.0 35.0 40.0 33.0 41.0 22 37.37863556955647 39.0 35.0 40.0 33.0 41.0 23 37.277886865661806 39.0 35.0 40.0 33.0 41.0 24 37.19339021599401 39.0 35.0 40.0 33.0 41.0 25 37.10127750545047 38.0 35.0 40.0 33.0 41.0 26 37.071281319602384 38.0 35.0 40.0 33.0 41.0 27 36.94896288029685 38.0 35.0 40.0 33.0 41.0 28 36.84958491667726 38.0 35.0 40.0 33.0 41.0 29 36.64732891645124 38.0 35.0 40.0 32.0 41.0 30 36.300534452151226 38.0 35.0 40.0 31.0 41.0 31 35.81527685563199 38.0 35.0 40.0 30.0 41.0 32 35.30634420602071 38.0 35.0 40.0 25.0 41.0 33 34.52799728771419 38.0 34.0 40.0 21.0 41.0 34 33.902530524987405 38.0 33.0 40.0 15.0 41.0 35 33.51942109649804 38.0 33.0 40.0 12.0 41.0 36 33.12964490716543 38.0 32.0 40.0 10.0 41.0 37 32.91467271280378 38.0 31.0 40.0 10.0 41.0 38 32.96217397241568 38.0 32.0 40.0 10.0 41.0 39 33.18461154510823 38.0 33.0 40.0 10.0 41.0 40 33.180054339892735 38.0 33.0 40.0 10.0 41.0 41 33.135443830727 38.0 33.0 40.0 10.0 41.0 42 32.922909868294035 38.0 32.0 40.0 10.0 41.0 43 32.757124223631735 38.0 31.0 40.0 10.0 41.0 44 32.615095565695235 38.0 31.0 40.0 9.0 41.0 45 32.612994015077675 38.0 31.0 40.0 9.0 41.0 46 32.33863500449693 38.0 31.0 40.0 8.0 41.0 47 32.294410148469396 37.0 31.0 40.0 8.0 41.0 48 32.26099346885345 38.0 31.0 40.0 8.0 41.0 49 32.36492345797605 38.0 31.0 40.0 8.0 41.0 50 32.23343268963634 38.0 31.0 40.0 8.0 41.0 51 31.39950651466565 37.0 28.0 40.0 8.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 2.0 10 7.0 11 6.0 12 11.0 13 11.0 14 19.0 15 48.0 16 94.0 17 230.0 18 635.0 19 1372.0 20 2615.0 21 4419.0 22 7657.0 23 13998.0 24 27216.0 25 53081.0 26 79272.0 27 74834.0 28 57840.0 29 48569.0 30 47227.0 31 51354.0 32 60744.0 33 76556.0 34 104838.0 35 139190.0 36 192278.0 37 281735.0 38 476779.0 39 320952.0 40 78.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.068579393220226 4.17663761318849 44.64351806071565 33.111264932875635 2 35.81747634990371 3.8182485979460083 41.944887859224835 18.419387192925456 3 15.063216036389834 3.8976394637584932 62.17679771339238 18.862346786459288 4 13.75034727617756 4.125123018171373 62.3544618514176 19.77006785423347 5 12.282605112847099 5.116896692989024 62.25209189751703 20.348406296646843 6 15.461818455786444 5.642684597889502 65.07979111632221 13.815705830001837 7 62.05997165284626 1.3451713307623123 30.481006936105892 6.113850080285543 8 60.85145055493556 1.7463636063983576 29.556145728856176 7.846040109809904 9 54.63847961312257 4.68782814655761 33.19470539208069 7.478986848239133 10 24.435387795655632 17.366210381085573 41.23536142621029 16.963040397048506 11 15.874076480809165 18.406296646842492 43.2738137281216 22.44581314422674 12 13.169936948772643 15.151459501711658 49.883079762863346 21.795523786652353 13 17.38113737068377 16.440689937702185 51.27176067844815 14.906412013165887 14 15.304402284724086 18.93726426422184 48.56743279323059 17.190900657823484 15 11.126634552449298 19.343824605517806 50.30277773853753 19.226763103495365 16 10.088055112140776 19.685073481284757 47.862426836561234 22.36444457001323 17 10.215240597644645 20.584977892045377 45.486398545913445 23.71338296439654 18 11.23790419415446 18.43163014969369 49.56382112098396 20.766644535167895 19 11.62360442064916 22.196621885697873 48.46289677774796 17.716876915905015 20 12.070283989508727 24.000433212316413 45.943390451435484 17.98589234673937 21 11.348608776316471 25.994716693271553 45.95116002015379 16.705514510258183 22 9.935394858899924 23.677313330225505 42.88373429016749 23.503557520707076 23 10.377271421642723 24.079353195176274 41.14692960770741 24.39644577547359 24 11.98100458169113 22.24239170869297 41.79335772507028 23.98324598454562 25 10.701851040886767 25.185080544529047 39.14106240611771 24.972006008466472 26 10.695117414664237 26.980698507771923 41.94714809739743 20.37703598016641 27 13.322926820080333 26.01275151035707 41.980533698738505 18.683787970824092 28 10.852486497431334 24.175554582397453 42.41068527596095 22.56127364421026 29 12.508252223744742 22.949187020582293 40.814015360201914 23.72854539547105 30 17.22094299020093 26.1503905974092 36.13094313146581 20.49772328092406 31 13.674393855919234 31.423526254079025 31.970268450371293 22.93181143963045 32 11.750554464676716 30.656599189139556 31.774993289917923 25.817853056265804 33 14.370594301374506 26.035589333559354 30.798570399355835 28.795245965710304 34 13.066248522604736 25.080167822684313 30.31440854746736 31.539175107243594 35 11.961274585976165 27.88159177273305 29.28519967791606 30.871933963374726 36 12.512537258613627 32.73766639826338 27.081420371338293 27.66837597178469 37 11.800091351292808 32.54418059302999 29.7467120597833 25.909015995893903 38 12.580108962315236 26.316894809457214 32.34608013486088 28.756916093366673 39 15.366700099356304 19.357009328191292 31.44287954343189 33.83341102902052 40 15.963026270559928 19.262408943009035 29.46437064138967 35.310194145041365 41 13.750676894244398 22.729802652954557 25.725183291189307 37.79433716161174 42 15.948805605390667 23.969967085281613 28.239462816727645 31.84176449260007 43 15.646781279577334 23.10674445653044 34.70529790409998 26.541176359792246 44 16.045807493631308 22.709366332810653 32.33986447988623 28.904961693671805 45 19.385686100006122 19.210282200153507 31.95256325135261 29.45146844848776 46 20.287756572348812 20.29062895835982 32.65309581997203 26.76851864931934 47 14.261679074432468 22.962136301779466 34.61361699322399 28.162567630564073 48 14.362118408227268 20.508506500539163 36.28106061676249 28.84831447447108 49 19.966708575249452 15.960059707958393 36.44139626213112 27.631835454661037 50 18.35388737421539 13.86269994867376 34.630521691223215 33.15289098588764 51 16.544190010689043 13.789713091016967 31.762750333149686 37.903346565144304 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 644.0 1 1478.0 2 2312.0 3 43895.0 4 85478.0 5 58974.5 6 32471.0 7 32091.0 8 31711.0 9 32687.5 10 33664.0 11 34041.0 12 34418.0 13 33463.5 14 32509.0 15 31484.5 16 30460.0 17 28956.5 18 27453.0 19 25903.5 20 24354.0 21 22723.0 22 21092.0 23 19953.0 24 18814.0 25 18023.0 26 16826.0 27 16420.0 28 16685.0 29 16950.0 30 17938.0 31 18926.0 32 20799.5 33 22673.0 34 25524.0 35 28375.0 36 33456.5 37 38538.0 38 44624.0 39 50710.0 40 63678.5 41 76647.0 42 97111.5 43 117576.0 44 141201.0 45 164826.0 46 210605.0 47 256384.0 48 297966.5 49 339549.0 50 310589.5 51 281630.0 52 216180.0 53 150730.0 54 110705.0 55 70680.0 56 51915.5 57 33151.0 58 25691.0 59 18231.0 60 14889.5 61 11548.0 62 9587.0 63 7626.0 64 6051.0 65 4476.0 66 3433.0 67 2390.0 68 1876.5 69 1363.0 70 1057.0 71 751.0 72 603.5 73 456.0 74 331.0 75 161.5 76 117.0 77 97.0 78 77.0 79 55.0 80 33.0 81 19.0 82 5.0 83 7.5 84 10.0 85 6.0 86 2.0 87 1.5 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2123670.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.63195358396391 #Duplication Level Percentage of deduplicated Percentage of total 1 75.40902713386431 28.37789008913457 2 10.078476210034564 7.5854549786621055 3 4.41993852360434 4.989927640927575 4 2.543479381758062 3.8286439214435446 5 1.6625612388792936 3.128271368600156 6 1.1157031103003767 2.5191652596184766 7 0.8287775107564739 2.1831961771354544 8 0.6328816925406289 1.905325958226357 9 0.4655584077515887 1.5767885152018741 >10 2.5353034903927285 16.47329459556432 >50 0.16391701984851312 4.315856462562717 >100 0.12631440037804853 9.162863657750979 >500 0.010862389305127357 2.8463429506585314 >1k 0.006062728914489688 4.215732266632552 >5k 3.789205571556055E-4 0.9027702630438937 >10k+ 7.57841114311211E-4 5.988475894836894 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 53468 2.517716971092496 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCC 21469 1.0109386109894665 No Hit CTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGCT 16986 0.7998417833279182 TruSeq Adapter, Index 19 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 11825 0.5568190914784312 TruSeq Adapter, Index 16 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 11230 0.5288015557972755 TruSeq Adapter, Index 16 (95% over 22bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGC 11011 0.5184892191347996 No Hit GCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTGC 7137 0.3360691632880815 TruSeq Adapter, Index 16 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTG 6098 0.28714442451039945 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCG 5758 0.2711344041211676 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTC 4813 0.22663596509815553 No Hit TCCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTG 4593 0.2162765401404173 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCT 3707 0.17455631053788961 No Hit TTTCCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTC 3559 0.1675872428390475 No Hit TTCCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCT 3525 0.1659862408001243 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGT 3373 0.15882881992023243 No Hit CGTTCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTC 3260 0.15350784255557595 No Hit CGTCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCT 3258 0.15341366596505107 No Hit GTTTCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTC 2353 0.11079875875253688 No Hit TTCTGTCTCTTATACACATCTGACGCAAATCCCCTCGTATGCCGTCTTCTG 2299 0.10825599080836476 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.2379465736201954E-4 0.0 0.0 0.8604444193306869 0.0 2 4.2379465736201954E-4 0.0 0.0 2.4317808322385304 0.0 3 4.2379465736201954E-4 0.0 0.0 3.5131164446453544 0.0 4 4.2379465736201954E-4 0.0 0.0 4.993337006220364 0.0 5 4.2379465736201954E-4 0.0 0.0 7.906548569222148 0.0 6 4.2379465736201954E-4 0.0 0.0 10.565577514397246 0.0 7 4.2379465736201954E-4 0.0 0.0 13.093936440219055 0.0 8 4.2379465736201954E-4 0.0 0.0 17.091591443114986 0.0 9 4.2379465736201954E-4 0.0 0.0 19.06675707619357 0.0 10 4.2379465736201954E-4 0.0 0.0 22.737101338720233 0.0 11 4.708829526244661E-4 0.0 0.0 29.779862219648063 0.0 12 4.708829526244661E-4 0.0 0.0 35.3581771179138 0.0 13 4.708829526244661E-4 0.0 0.0 37.40195039718977 0.0 14 4.708829526244661E-4 0.0 0.0 38.12433193481096 0.0 15 5.179712478869127E-4 0.0 0.0 38.941549299090724 0.0 16 5.650595431493594E-4 0.0 0.0 41.014328968248364 0.0 17 5.650595431493594E-4 0.0 0.0 43.83171585039107 0.0 18 5.650595431493594E-4 0.0 0.0 46.57644549294382 0.0 19 5.650595431493594E-4 0.0 0.0 48.18243889116482 0.0 20 5.650595431493594E-4 0.0 0.0 49.55741711282826 0.0 21 6.12147838411806E-4 0.0 0.0 51.07582628186112 0.0 22 6.12147838411806E-4 0.0 0.0 52.318486393837084 0.0 23 6.12147838411806E-4 0.0 0.0 53.26731554337538 0.0 24 0.0010359424957738254 0.0 0.0 53.83783732877519 0.0 25 0.001083030791036272 0.0 0.0 54.26525778487242 0.0 26 0.001083030791036272 0.0 0.0 54.592709790127465 0.0 27 0.0011301190862987188 0.0 0.0 54.89760650195181 0.0 28 0.0011301190862987188 0.0 0.0 55.1781114768302 0.0 29 0.0011301190862987188 0.0 0.0 55.43945151553678 0.0 30 0.0011301190862987188 0.0 0.0 55.70385229343542 0.0 31 0.0011301190862987188 0.0 0.0 55.94056515371974 0.0 32 0.0011301190862987188 0.0 0.0 56.160043697938 0.0 33 0.0011301190862987188 0.0 0.0 56.378486299660494 0.0 34 0.0011301190862987188 0.0 0.0 56.578234848163795 0.0 35 0.0011301190862987188 0.0 0.0 56.785376259023295 0.0 36 0.0011772073815611653 0.0 0.0 56.97467120597833 0.0 37 0.0011772073815611653 0.0 0.0 57.18360197205781 0.0 38 0.0011772073815611653 0.0 0.0 57.39309779768043 0.0 39 0.0011772073815611653 0.0 0.0 57.597366822528926 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGCGG 35 1.2125747E-7 45.000004 2 AGTTCGG 30 2.1663745E-6 45.000004 2 CTATCCG 20 7.0346385E-4 45.0 1 GGCGTTA 25 3.8919265E-5 45.0 8 ACGGGTA 90 0.0 45.0 5 GCGATAC 20 7.0346385E-4 45.0 9 CGGCTCG 20 7.0346385E-4 45.0 1 CGTTTTT 43130 0.0 44.634827 1 TACCGGG 60 3.6379788E-12 41.250004 3 TCGATTG 55 6.184564E-11 40.909092 1 TTCGTTG 425 0.0 40.764706 1 CCTTACG 50 1.0822987E-9 40.5 1 GTTTTTT 47635 0.0 40.446625 2 TACTGCG 45 1.929584E-8 40.0 1 TGTACGG 90 0.0 40.0 2 TGTACCG 45 1.929584E-8 40.0 1 GTTTGCG 250 0.0 39.6 1 CCGTTTG 195 0.0 39.23077 1 CGTTAGG 115 0.0 39.130432 2 GACGGGA 110 0.0 38.863636 4 >>END_MODULE