SRR2933692.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933692.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	234507
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17418	7.427496833783214	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCC	2524	1.0763004942283172	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGC	1388	0.5918799865249226	No Hit
CCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	1035	0.44135143087413164	No Hit
CTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGCT	970	0.4136337081622297	No Hit
TCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	573	0.24434238636799754	No Hit
GCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	474	0.2021261625452545	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	473	0.20169973604199448	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	434	0.18506910241485328	No Hit
CGTTTTTTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCG	433	0.18464267591159325	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	250	0.10660662581500764	No Hit
CGCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTG	246	0.10490091980196753	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	241	0.10276878728566739	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAGGGA	45	3.8198777E-10	45.000004	4
CGAATAT	30	2.158089E-6	45.000004	14
CCTTCGG	35	1.2064083E-7	45.0	2
ACTATGA	20	7.021792E-4	45.0	25
TCTTGCG	25	3.8812817E-5	45.0	1
CACGGCT	20	7.021792E-4	45.0	18
CGTGCGG	20	7.021792E-4	45.0	2
TAGCGGG	25	3.8812817E-5	45.0	3
CGTTAGG	20	7.021792E-4	45.0	2
GTGCTAG	20	7.021792E-4	45.0	1
CTACGAA	40	6.7757355E-9	45.0	11
TACGAAT	40	6.7757355E-9	45.0	12
AGACCTA	20	7.021792E-4	45.0	32
TAGGGAC	25	3.8812817E-5	45.0	5
CGGGAAC	20	7.021792E-4	45.0	6
CATACGA	20	7.021792E-4	45.0	18
GCGATGC	20	7.021792E-4	45.0	9
GCTACGA	40	6.7757355E-9	45.0	10
ATACGAA	20	7.021792E-4	45.0	19
ACATACG	20	7.021792E-4	45.0	17