SRR2933691.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933691.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	236816
Sequences flagged as poor quality	0
Sequence length	51
%GC	39

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	17458	7.371968110262821	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCC	2552	1.077629889872306	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGC	1301	0.5493716640767515	No Hit
CCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	1022	0.43155867846767115	No Hit
CTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGCT	1009	0.42606918451455983	No Hit
TCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	582	0.2457604215931356	No Hit
GCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC	498	0.21028984528072428	No Hit
CGTTTTTTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCG	451	0.1904432132963989	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	394	0.16637389365583408	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	386	0.1629957435308425	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	264	0.1114789541247213	No Hit
CGCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTG	262	0.11063441659347341	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	241	0.10176677251537058	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTTGCG	25	3.881398E-5	45.0	1
ATGGGAT	20	7.0219336E-4	45.0	5
ATGGGAC	25	3.881398E-5	45.0	5
GGTACAA	20	7.0219336E-4	45.0	8
CTCGTGG	40	6.7757355E-9	45.0	2
ACGTTGG	20	7.0219336E-4	45.0	2
GGGTAAC	25	3.881398E-5	45.0	7
TATGCGG	20	7.0219336E-4	45.0	2
TGTTGCG	20	7.0219336E-4	45.0	1
GCCGATG	25	3.881398E-5	45.0	9
AGTGCGC	25	3.881398E-5	45.0	13
TGTTCCG	25	3.881398E-5	45.0	1
AGATTAT	20	7.0219336E-4	45.0	6
CTACCAT	20	7.0219336E-4	45.0	3
CGCACCC	20	7.0219336E-4	45.0	31
GCTACCA	20	7.0219336E-4	45.0	2
CACGTTG	20	7.0219336E-4	45.0	1
AGGGCGA	20	7.0219336E-4	45.0	6
TACGTTG	20	7.0219336E-4	45.0	24
AAGCTCC	20	7.0219336E-4	45.0	34