##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933691.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 236816 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.957764678062293 33.0 31.0 34.0 30.0 34.0 2 32.1845863455172 34.0 31.0 34.0 30.0 34.0 3 32.26808154854402 33.0 31.0 34.0 30.0 34.0 4 35.84089335180055 37.0 35.0 37.0 35.0 37.0 5 35.920997736639414 37.0 35.0 37.0 35.0 37.0 6 35.91859080467536 37.0 35.0 37.0 35.0 37.0 7 35.86992010674955 37.0 35.0 37.0 35.0 37.0 8 35.72472721437741 37.0 35.0 37.0 35.0 37.0 9 37.553543679481116 39.0 37.0 39.0 35.0 39.0 10 37.17181693804473 39.0 37.0 39.0 34.0 39.0 11 37.177188196743465 39.0 37.0 39.0 34.0 39.0 12 37.14432724140261 39.0 37.0 39.0 34.0 39.0 13 37.08404415242213 39.0 37.0 39.0 33.0 39.0 14 38.199222180933724 40.0 38.0 41.0 33.0 41.0 15 38.20890902641713 40.0 38.0 41.0 33.0 41.0 16 38.3529702384974 40.0 38.0 41.0 33.0 41.0 17 38.33773055874603 40.0 38.0 41.0 33.0 41.0 18 38.0492027565705 39.0 38.0 40.0 34.0 41.0 19 37.67832832241065 38.0 37.0 40.0 34.0 41.0 20 37.11455307073847 38.0 35.0 40.0 33.0 41.0 21 37.01078896696169 38.0 35.0 40.0 33.0 41.0 22 37.00139348692656 38.0 35.0 40.0 33.0 41.0 23 36.895741841767446 38.0 35.0 40.0 33.0 41.0 24 36.76145615161138 38.0 35.0 40.0 33.0 41.0 25 36.69173957840687 38.0 35.0 40.0 33.0 41.0 26 36.682179413553136 38.0 35.0 40.0 33.0 41.0 27 36.64458060266198 38.0 35.0 40.0 33.0 41.0 28 36.57063289642592 38.0 35.0 40.0 33.0 41.0 29 36.39341936355652 38.0 35.0 40.0 32.0 41.0 30 36.15546246875211 38.0 35.0 40.0 31.0 41.0 31 35.78780994527397 38.0 35.0 40.0 30.0 41.0 32 35.373766975204376 38.0 35.0 40.0 28.0 41.0 33 34.79592595094926 38.0 35.0 40.0 23.0 41.0 34 34.36195611782988 38.0 34.0 40.0 20.0 41.0 35 34.0034837173164 38.0 34.0 40.0 18.0 41.0 36 33.76238514289575 37.0 33.0 40.0 15.0 41.0 37 33.5924810823593 37.0 33.0 40.0 15.0 41.0 38 33.38309489223701 37.0 33.0 40.0 15.0 41.0 39 33.35166542801162 37.0 33.0 40.0 15.0 41.0 40 33.245376157016416 37.0 33.0 40.0 13.0 41.0 41 33.06987703533545 37.0 33.0 40.0 12.0 41.0 42 32.81325163840281 36.0 33.0 40.0 10.0 41.0 43 32.65621832984258 36.0 32.0 40.0 10.0 41.0 44 32.55600128369705 36.0 32.0 40.0 10.0 41.0 45 32.492703195730016 36.0 32.0 40.0 10.0 41.0 46 32.20977890007432 35.0 31.0 40.0 10.0 41.0 47 32.05711185055064 35.0 31.0 40.0 10.0 41.0 48 31.945155732720764 35.0 31.0 40.0 10.0 41.0 49 31.96380734409837 35.0 31.0 40.0 10.0 41.0 50 31.79391595162489 35.0 31.0 39.0 10.0 41.0 51 30.97010759408148 35.0 28.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 4.0 11 7.0 12 4.0 13 15.0 14 13.0 15 13.0 16 29.0 17 52.0 18 100.0 19 200.0 20 377.0 21 551.0 22 850.0 23 1461.0 24 2490.0 25 4310.0 26 6767.0 27 7426.0 28 7067.0 29 6677.0 30 6445.0 31 6979.0 32 7717.0 33 9665.0 34 14081.0 35 19948.0 36 25946.0 37 27044.0 38 42807.0 39 37762.0 40 6.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.419228430511453 5.345500304033511 36.10946895480035 38.125802310654684 2 40.10793189649348 4.836666441456659 37.34460509425039 17.710796567799473 3 17.1398891966759 4.956590770893858 61.12298155530031 16.780538477129923 4 14.104621309370987 5.27582595770556 60.94562867373826 19.67392405918519 5 12.416813053172083 5.85602324167286 61.662218769002095 20.064944936152962 6 15.328778460914801 6.5493885548273765 64.31702249847984 13.804810485777988 7 57.87826836024593 3.0610262820079726 33.8317512330248 5.2289541247213025 8 56.959411526248225 3.5795723261941763 33.17343422741706 6.287581920140531 9 52.08558543341666 5.822241740422944 35.94182825484765 6.150344571312749 10 25.761350584419972 20.54337544760489 39.93142355246267 13.763850415512465 11 18.87203567326532 17.636477265049656 43.9898486588744 19.50163840281062 12 15.938112289710155 15.921221539085199 49.25216201607999 18.888504155124654 13 18.381781636375923 16.72859941895818 50.384686845483415 14.504932099182488 14 15.887862306600905 17.643233565299642 50.579775015201676 15.889129112897777 15 12.428214309843929 16.719731774880074 51.28749746638741 19.564556448888588 16 13.430680359435174 17.839588541314775 48.638605499628405 20.09112559962165 17 13.068796027295454 18.13433213972029 47.002736301601246 21.794135531383017 18 14.67848456185393 16.072393757178567 49.78253158570367 19.466590095263832 19 14.10250996554287 19.512617390716844 49.13857171812715 17.246300925613134 20 14.892574826025267 22.428805486115802 46.732484291601914 15.946135396257011 21 13.868995338152828 23.882676846159043 46.87985609080468 15.368471724883454 22 12.476775217890683 21.40395919194649 45.75831024930748 20.360955340855348 23 12.307445442875482 22.6703432200527 43.76857982568745 21.253631511384366 24 12.437504222687657 22.28523410580366 44.55737787987298 20.719883791635702 25 13.275285453685562 23.204090939801365 41.81558678467671 21.705036821836362 26 13.401543814607123 23.337105600972908 43.08112627525168 20.1802243091683 27 14.025234781433687 21.53148435916492 44.4906594149044 19.952621444496994 28 11.63392676170529 21.352864671305994 44.09879400040538 22.91441456658334 29 14.488463617323156 19.795115194919262 43.336176609688536 22.38024457806905 30 19.27361326937369 19.398182555232754 41.873859874332815 19.45434430106074 31 17.490372272143777 24.56548544017296 36.62970407404905 21.31443821363421 32 16.026788730491184 25.11147895412472 35.69142287683265 23.17030943855145 33 16.708752786973854 22.570265522599826 35.444817917708264 25.276163772718057 34 16.551668806161747 21.79371326261739 36.07568745355044 25.578930477670426 35 18.734798324437538 24.1305486115803 33.41539423011959 23.71925883386258 36 18.775336125937436 25.057850820890483 32.483024795621915 23.683788257550166 37 15.082595770556043 25.899432470779 31.80232754543612 27.215644213228835 38 14.538713600432404 30.062580231065468 32.64390919532464 22.754796973177488 39 16.60656374569286 25.863117356935344 36.17069792581582 21.359620971555977 40 18.684548341328288 22.90047969731775 35.963363961894466 22.451607999459497 41 16.265370583068712 27.504053780149988 31.314184852374837 24.91639078440646 42 17.754290250658737 29.3206540098642 32.118606850888455 20.80644888858861 43 16.477771772177555 25.714901020201335 36.56509695290859 21.242230254712517 44 17.135244240254035 22.59771299236538 35.64032835619215 24.626714411188434 45 20.272701168839944 19.96740085129383 34.741740422944396 25.018157556921828 46 19.767245456388082 21.31823863252483 37.43581514762516 21.478700763461926 47 14.528156881291803 26.58984190257415 38.40576650226336 20.476234713870685 48 14.602053915275995 25.960661441794475 39.23341328288629 20.20387136004324 49 19.098371731639755 21.527683940274304 39.46735017904196 19.906594149043983 50 17.69559489223701 19.44252077562327 37.93831497871765 24.923569353422064 51 15.974427403553815 19.181558678467674 35.66608675089521 29.177927167083308 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 671.0 1 1144.0 2 1617.0 3 13222.0 4 24827.0 5 14950.0 6 5073.0 7 4849.0 8 4625.0 9 4482.0 10 4339.0 11 4190.0 12 4041.0 13 3846.0 14 3651.0 15 3365.5 16 3080.0 17 2765.0 18 2450.0 19 2231.5 20 2013.0 21 1878.0 22 1743.0 23 1667.5 24 1592.0 25 1569.0 26 1605.5 27 1665.0 28 1734.5 29 1804.0 30 1929.5 31 2055.0 32 2181.0 33 2307.0 34 2650.0 35 2993.0 36 3095.5 37 3198.0 38 3591.5 39 3985.0 40 5173.0 41 6361.0 42 8446.0 43 10531.0 44 11479.5 45 12428.0 46 15535.0 47 18642.0 48 22507.5 49 26373.0 50 26355.0 51 26337.0 52 21811.0 53 17285.0 54 13886.0 55 10487.0 56 8904.0 57 7321.0 58 6385.5 59 5450.0 60 4884.0 61 4318.0 62 3773.0 63 3228.0 64 2905.5 65 2583.0 66 2236.0 67 1889.0 68 1626.5 69 1364.0 70 1171.5 71 979.0 72 862.0 73 745.0 74 660.5 75 445.5 76 315.0 77 262.5 78 210.0 79 144.0 80 78.0 81 53.0 82 28.0 83 16.5 84 5.0 85 5.0 86 5.0 87 3.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 236816.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.97067463277552 #Duplication Level Percentage of deduplicated Percentage of total 1 72.29816176717814 34.68191594681074 2 14.148327356011265 13.574096163864272 3 5.869830444410624 8.447391791951466 4 2.8921571346640054 5.549549155753094 5 1.4374895209567984 3.4478671048921465 6 0.8344672830947746 2.4017975117421364 7 0.5274945538419914 1.7712988729040684 8 0.36022086991821317 1.382403051742557 9 0.24542183990070848 1.0595746106688613 >10 1.2785628822911983 11.170580534041484 >50 0.07125116547451102 2.342256471318188 >100 0.030677585134858913 2.8141257320580095 >500 9.895995204793199E-4 0.27628562349152525 >1k 0.0039583980819172795 2.7932381591479976 >5k 0.0 0.0 >10k+ 9.895995204793199E-4 8.287619269613483 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17458 7.371968110262821 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCC 2552 1.077629889872306 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGC 1301 0.5493716640767515 No Hit CCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC 1022 0.43155867846767115 No Hit CTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGCT 1009 0.42606918451455983 No Hit TCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC 582 0.2457604215931356 No Hit GCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTGC 498 0.21028984528072428 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCG 451 0.1904432132963989 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 394 0.16637389365583408 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 386 0.1629957435308425 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 264 0.1114789541247213 No Hit CGCTGTCTCTTATACACATCTGACGCGCCATCAATCGTATGCCGTCTTCTG 262 0.11063441659347341 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 241 0.10176677251537058 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4868758867644078 0.0 2 0.0 0.0 0.0 1.5636612391054658 0.0 3 0.0 0.0 0.0 2.1404803729477737 0.0 4 0.0 0.0 0.0 2.9288561583676778 0.0 5 0.0 0.0 0.0 4.585416525910412 0.0 6 4.2226876562394435E-4 0.0 0.0 6.188348760218904 0.0 7 4.2226876562394435E-4 0.0 0.0 7.78199108168367 0.0 8 4.2226876562394435E-4 0.0 0.0 10.197368421052632 0.0 9 4.2226876562394435E-4 0.0 0.0 11.330737787987298 0.0 10 4.2226876562394435E-4 0.0 0.0 13.615211810012838 0.0 11 4.2226876562394435E-4 0.0 0.0 18.948466319843252 0.0 12 4.2226876562394435E-4 0.0 0.0 23.370042564691573 0.0 13 4.2226876562394435E-4 0.0 0.0 24.98099790554692 0.0 14 4.2226876562394435E-4 0.0 0.0 25.581041821498548 0.0 15 4.2226876562394435E-4 0.0 0.0 26.34112559962165 0.0 16 4.2226876562394435E-4 0.0 0.0 27.969393959867578 0.0 17 4.2226876562394435E-4 0.0 0.0 29.993328153503143 0.0 18 4.2226876562394435E-4 0.0 0.0 31.894382136342138 0.0 19 4.2226876562394435E-4 0.0 0.0 33.04295317883927 0.0 20 4.2226876562394435E-4 0.0 0.0 34.0804675359773 0.0 21 4.2226876562394435E-4 0.0 0.0 35.283511249239915 0.0 22 4.2226876562394435E-4 0.0 0.0 36.277954192284305 0.0 23 4.2226876562394435E-4 0.0 0.0 37.06886359029795 0.0 24 4.2226876562394435E-4 0.0 0.0 37.51984663198432 0.0 25 4.2226876562394435E-4 0.0 0.0 37.81754611174921 0.0 26 4.2226876562394435E-4 0.0 0.0 38.059083845686104 0.0 27 4.2226876562394435E-4 0.0 0.0 38.27190730356057 0.0 28 4.2226876562394435E-4 0.0 0.0 38.46784001081008 0.0 29 8.445375312478887E-4 0.0 0.0 38.68150800621579 0.0 30 8.445375312478887E-4 0.0 0.0 38.91037767718397 0.0 31 8.445375312478887E-4 0.0 0.0 39.07464022701169 0.0 32 8.445375312478887E-4 0.0 0.0 39.29675359772988 0.0 33 8.445375312478887E-4 0.0 0.0 39.46650564151071 0.0 34 8.445375312478887E-4 0.0 0.0 39.64132491047902 0.0 35 8.445375312478887E-4 0.0 0.0 39.8119214917911 0.0 36 0.001266806296871833 0.0 0.0 39.95675967840011 0.0 37 0.001266806296871833 0.0 0.0 40.11426592797784 0.0 38 0.001266806296871833 0.0 0.0 40.327089385852304 0.0 39 0.001266806296871833 0.0 0.0 40.6408350787109 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTGCG 25 3.881398E-5 45.0 1 ATGGGAT 20 7.0219336E-4 45.0 5 ATGGGAC 25 3.881398E-5 45.0 5 GGTACAA 20 7.0219336E-4 45.0 8 CTCGTGG 40 6.7757355E-9 45.0 2 ACGTTGG 20 7.0219336E-4 45.0 2 GGGTAAC 25 3.881398E-5 45.0 7 TATGCGG 20 7.0219336E-4 45.0 2 TGTTGCG 20 7.0219336E-4 45.0 1 GCCGATG 25 3.881398E-5 45.0 9 AGTGCGC 25 3.881398E-5 45.0 13 TGTTCCG 25 3.881398E-5 45.0 1 AGATTAT 20 7.0219336E-4 45.0 6 CTACCAT 20 7.0219336E-4 45.0 3 CGCACCC 20 7.0219336E-4 45.0 31 GCTACCA 20 7.0219336E-4 45.0 2 CACGTTG 20 7.0219336E-4 45.0 1 AGGGCGA 20 7.0219336E-4 45.0 6 TACGTTG 20 7.0219336E-4 45.0 24 AAGCTCC 20 7.0219336E-4 45.0 34 >>END_MODULE