##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933687.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 900790 Sequences flagged as poor quality 0 Sequence length 51 %GC 34 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.50964597741982 34.0 31.0 34.0 31.0 34.0 2 32.735343420775095 34.0 31.0 34.0 31.0 34.0 3 32.74448872656224 34.0 31.0 34.0 31.0 34.0 4 36.208614660464704 37.0 37.0 37.0 35.0 37.0 5 36.27052587173481 37.0 37.0 37.0 35.0 37.0 6 36.27360650096027 37.0 37.0 37.0 35.0 37.0 7 36.282992706402155 37.0 37.0 37.0 35.0 37.0 8 36.234360949832926 37.0 37.0 37.0 35.0 37.0 9 38.08468899521531 39.0 39.0 39.0 37.0 39.0 10 37.71799864563328 39.0 38.0 39.0 35.0 39.0 11 37.5745057116531 39.0 37.0 39.0 35.0 39.0 12 37.60925187890629 39.0 37.0 39.0 35.0 39.0 13 37.63430988354666 39.0 37.0 39.0 35.0 39.0 14 39.020590814729296 40.0 39.0 41.0 35.0 41.0 15 39.058690704825764 41.0 39.0 41.0 35.0 41.0 16 39.121100367455234 41.0 39.0 41.0 35.0 41.0 17 39.084657911388895 41.0 39.0 41.0 35.0 41.0 18 38.52569078253533 39.0 38.0 40.0 35.0 41.0 19 37.933176434019025 38.0 37.0 40.0 35.0 41.0 20 37.20058282174536 38.0 35.0 40.0 34.0 41.0 21 37.13676106528714 38.0 35.0 40.0 34.0 41.0 22 37.120165632389345 38.0 35.0 40.0 34.0 41.0 23 36.9691470820058 38.0 35.0 40.0 34.0 41.0 24 36.87627304921236 37.0 35.0 40.0 34.0 41.0 25 36.82690860244896 37.0 35.0 40.0 33.0 41.0 26 36.81433075411583 37.0 35.0 40.0 33.0 41.0 27 36.7606611973934 37.0 35.0 40.0 33.0 41.0 28 36.675393820979366 37.0 35.0 40.0 33.0 41.0 29 36.47615093418 37.0 35.0 40.0 33.0 41.0 30 36.15612850941951 37.0 35.0 40.0 33.0 41.0 31 35.63753483053764 37.0 35.0 40.0 30.0 41.0 32 34.808869991896 37.0 35.0 40.0 22.0 41.0 33 33.53180430510996 37.0 33.0 40.0 15.0 41.0 34 32.42970836709999 37.0 31.0 40.0 10.0 41.0 35 31.715319885877953 37.0 30.0 40.0 7.0 41.0 36 31.306300025533144 37.0 25.0 40.0 7.0 41.0 37 31.073562095493955 36.0 24.0 40.0 7.0 41.0 38 30.882776229753883 36.0 23.0 40.0 7.0 41.0 39 30.76926142608155 36.0 23.0 40.0 7.0 41.0 40 30.58456799031961 36.0 22.0 40.0 7.0 41.0 41 30.40382886133283 36.0 22.0 40.0 7.0 41.0 42 30.18022846612418 36.0 21.0 40.0 7.0 41.0 43 30.047903506921703 35.0 20.0 40.0 7.0 41.0 44 29.893373594289457 35.0 20.0 40.0 7.0 41.0 45 29.80850919748221 35.0 20.0 40.0 7.0 41.0 46 29.65593312536773 35.0 20.0 40.0 7.0 41.0 47 29.615874954206863 35.0 20.0 40.0 7.0 41.0 48 29.49240333485052 35.0 20.0 40.0 7.0 41.0 49 29.453368709688164 35.0 20.0 40.0 7.0 41.0 50 29.295637162934757 35.0 20.0 40.0 7.0 41.0 51 28.62347717003963 35.0 18.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 3.0 10 2.0 11 3.0 12 8.0 13 8.0 14 14.0 15 28.0 16 52.0 17 148.0 18 318.0 19 682.0 20 1254.0 21 2092.0 22 3368.0 23 5892.0 24 11989.0 25 27129.0 26 47544.0 27 54776.0 28 46515.0 29 35543.0 30 28377.0 31 25051.0 32 24340.0 33 26578.0 34 36544.0 35 48914.0 36 62324.0 37 73038.0 38 138546.0 39 199601.0 40 107.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 16.38006638617214 3.2576960223803546 37.42881248681712 42.93342510463038 2 47.84977630746345 3.208627982104597 36.76717103875487 12.174424671677084 3 14.306442123025345 3.6007282496475312 69.57170927741205 12.521120349915074 4 12.11025877285494 3.3609387315578547 69.15807235870736 15.370730136879851 5 11.867360872123358 4.066430577604103 68.76075444887265 15.305454101399881 6 13.920447607100433 4.813330520987134 69.76320785088645 11.503014021025988 7 56.61319508431488 1.2452402890795857 39.316932914441765 2.824631712163767 8 58.64241388114877 1.5415357630524318 37.46833335183561 2.347717003963188 9 54.24216521053742 4.114055440224692 38.71523884590193 2.928540503335961 10 22.408552492811864 26.103309317376972 42.65289357119861 8.835244618612553 11 16.378956249514314 17.711786320896103 53.924444099068594 11.984813330520987 12 14.49949488782069 17.536162701628573 54.457975776818124 13.506366633732615 13 15.031361360583487 16.92236814351847 55.881504013144024 12.164766482754027 14 13.919115443111046 18.534508598008415 54.73606500960268 12.810310949277856 15 12.823188534508597 18.144406576449562 55.713540336815456 13.318864552226378 16 14.798787730769657 18.741993139355454 53.75936677805038 12.699852351824509 17 14.930005883724288 17.807369087134624 53.74993061645888 13.512694412682203 18 15.676572786109972 16.703560208261635 54.0383441201612 13.581522885467201 19 15.100633888031616 18.77807258073469 52.71439514204198 13.40689838919171 20 16.01682967173259 19.892094716859646 51.60781092152445 12.483264689883326 21 15.920580823499373 20.079818825697444 51.872689528080905 12.126910822722277 22 15.801574173780791 17.96356531489026 52.02733156451559 14.207528946813353 23 13.50292521009336 20.375559231341377 51.7995315223304 14.321984036234861 24 13.023346173914007 20.064276912487927 52.80431621132562 14.108060702272448 25 13.984724519588362 21.247460562395233 51.17363647465003 13.594178443366378 26 14.462860378112547 20.908868881759343 50.780204043117706 13.848066697010402 27 14.287236758845015 19.76898056150712 51.784655691115574 14.15912698853229 28 13.279898755536806 20.46836665593535 51.50046070671299 14.751273881814853 29 14.605956993305877 19.25099079696711 51.09070926631068 15.052342943416336 30 16.287703016241302 19.140754226845324 50.7108205020038 13.86072225490958 31 16.289923289556945 20.692392233483943 48.49154630935068 14.526138167608432 32 16.097869647753637 21.258450915307677 47.4158238879206 15.227855549018084 33 16.43968072469721 22.316522163878375 45.16413370485907 16.07966340656535 34 16.132172870480357 23.839962699408296 43.360383663228944 16.667480766882402 35 16.960889885544912 26.25817338114322 40.247782502026 16.53315423128587 36 17.992650895325216 27.159715360960934 38.39363225613073 16.454001487583124 37 17.214667125523153 27.730103575750174 37.6092096937133 17.446019605013376 38 16.624185437227325 28.798943149901753 37.688473451081826 16.888397961789096 39 17.382519788185927 27.56469321373461 37.26406820679626 17.788718791283205 40 18.62809311826286 27.354322317077234 37.46689017418044 16.550694390479467 41 17.846889952153113 27.94658022402558 36.09831370241677 18.108216121404546 42 18.652516124734955 27.21910767215444 36.278377868315594 17.849998334795014 43 18.1335272372029 26.31234805004496 37.18236214878051 18.371762563971625 44 18.18803494710199 26.81179853239934 36.694679114999055 18.30548740549962 45 18.66605979196039 26.152710398650076 36.645722088389086 18.535507721000457 46 18.66739195594978 26.420142319519535 36.86985867960345 18.04260704492723 47 17.365756724652805 27.437027498085016 37.382408774520144 17.814807002742036 48 17.34743946979873 26.878184704537126 37.5878950698831 18.186480755781037 49 18.30548740549962 25.468533176434022 37.548041163867275 18.67793825419909 50 17.240977364313547 25.837098546831115 37.573685320662975 19.348238768192363 51 17.288713240599918 25.152699297283494 37.1029873777462 20.45560008437039 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 323.0 1 1032.0 2 1741.0 3 43204.5 4 84668.0 5 56846.0 6 29024.0 7 28362.0 8 27700.0 9 27489.5 10 27279.0 11 26555.0 12 25831.0 13 24636.5 14 23442.0 15 22283.0 16 21124.0 17 19862.5 18 18601.0 19 17318.0 20 16035.0 21 14862.5 22 13690.0 23 13270.0 24 12850.0 25 12479.0 26 12506.0 27 12904.0 28 13656.5 29 14409.0 30 15564.5 31 16720.0 32 17946.5 33 19173.0 34 21050.5 35 22928.0 36 25226.5 37 27525.0 38 29020.0 39 30515.0 40 33166.0 41 35817.0 42 39424.5 43 43032.0 44 45908.5 45 48785.0 46 51939.0 47 55093.0 48 56384.5 49 57676.0 50 55339.0 51 53002.0 52 47537.5 53 42073.0 54 37237.0 55 32401.0 56 28412.5 57 24424.0 58 20767.0 59 17110.0 60 14599.0 61 12088.0 62 9835.5 63 7583.0 64 6169.0 65 4755.0 66 3756.5 67 2758.0 68 2225.5 69 1693.0 70 1398.0 71 1103.0 72 996.5 73 890.0 74 917.0 75 778.5 76 613.0 77 418.0 78 223.0 79 147.5 80 72.0 81 62.5 82 53.0 83 29.0 84 5.0 85 5.5 86 6.0 87 3.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 900790.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.67318909499868 #Duplication Level Percentage of deduplicated Percentage of total 1 77.68721343457999 36.25910002895674 2 8.592477425201572 8.020766473218806 3 3.8709028908512666 5.420021477792347 4 2.2575235302622785 4.214632904573612 5 1.5684747150951388 3.6602858484179803 6 1.17731987329294 3.296956384290077 7 0.8715037406758189 2.847310121989284 8 0.6839794214305878 2.5538800698814095 9 0.5225161443668078 2.1948745330099486 >10 2.6580504209503855 19.296828913827625 >50 0.06363155979630487 2.019290919518703 >100 0.0430578960326227 3.298392774167431 >500 0.002392105331657384 0.7568562635872058 >1k 7.176315994972151E-4 0.4022648056799974 >5k 0.0 0.0 >10k+ 2.3921053316573837E-4 5.758538481088789 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 51578 5.725862853717293 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCATAACTCGTATGCC 1452 0.16119184271583833 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 1130 0.1254454423339513 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA 1021 0.11334495276368521 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.3304099734677336E-4 0.0 0.0 0.1031316955117175 0.0 2 3.3304099734677336E-4 0.0 0.0 0.31738807047147505 0.0 3 3.3304099734677336E-4 0.0 0.0 0.5017817693358052 0.0 4 3.3304099734677336E-4 0.0 0.0 0.7385739184493612 0.0 5 3.3304099734677336E-4 0.0 0.0 1.231585608188368 0.0 6 3.3304099734677336E-4 0.0 0.0 1.9556167364202532 0.0 7 3.3304099734677336E-4 0.0 0.0 2.651894448206574 0.0 8 3.3304099734677336E-4 0.0 0.0 3.709077587451015 0.0 9 3.3304099734677336E-4 0.0 0.0 4.408796722876586 0.0 10 4.4405466312903117E-4 0.0 0.0 5.268042496031262 0.0 11 4.4405466312903117E-4 0.0 0.0 6.452225268930605 0.0 12 4.4405466312903117E-4 0.0 0.0 7.4447984546897725 0.0 13 4.4405466312903117E-4 0.0 0.0 7.845668801829505 0.0 14 4.4405466312903117E-4 0.0 0.0 8.046714550561173 0.0 15 4.4405466312903117E-4 0.0 0.0 8.229332030772989 0.0 16 4.4405466312903117E-4 0.0 0.0 8.56825675240622 0.0 17 4.4405466312903117E-4 0.0 0.0 9.030961711386672 0.0 18 4.4405466312903117E-4 0.0 0.0 9.51376014387371 0.0 19 5.55068328911289E-4 0.0 0.0 9.796178909623775 0.0 20 6.660819946935467E-4 0.0 0.0 10.071270773432209 0.0 21 7.770956604758046E-4 0.0 0.0 10.362570632444854 0.0 22 7.770956604758046E-4 0.0 0.0 10.638994660242675 0.0 23 7.770956604758046E-4 0.0 0.0 10.894992173536563 0.0 24 7.770956604758046E-4 0.0 0.0 11.082161214045449 0.0 25 7.770956604758046E-4 0.0 0.0 11.232584731180408 0.0 26 7.770956604758046E-4 0.0 0.0 11.379455811010335 0.0 27 7.770956604758046E-4 0.0 0.0 11.539759544399915 0.0 28 7.770956604758046E-4 0.0 0.0 11.691737252855827 0.0 29 7.770956604758046E-4 0.0 0.0 11.85315112290323 0.0 30 7.770956604758046E-4 0.0 0.0 12.045093751040753 0.0 31 9.991229920403202E-4 0.0 0.0 12.20173403345952 0.0 32 9.991229920403202E-4 0.0 0.0 12.363813985501615 0.0 33 9.991229920403202E-4 0.0 0.0 12.520121226923035 0.0 34 9.991229920403202E-4 0.0 0.0 12.66887953907126 0.0 35 9.991229920403202E-4 0.0 0.0 12.848832691304299 0.0 36 0.001110136657822578 0.0 0.0 13.003585741404766 0.0 37 0.001110136657822578 0.0 0.0 13.167885966762508 0.0 38 0.001110136657822578 0.0 0.0 13.35483297993983 0.0 39 0.001110136657822578 0.0 0.0 13.629591802750918 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCGTAC 25 3.890131E-5 45.0 33 CCGCTTG 20 7.0324726E-4 45.0 1 GCTAGCG 25 3.890131E-5 45.0 1 TCATCCG 25 3.890131E-5 45.0 1 CGTTTTT 30700 0.0 44.684853 1 GTTTTTT 34560 0.0 40.20182 2 CTCGTTG 85 0.0 39.705883 1 CGCCGGT 105 0.0 38.57143 28 CTTCGCG 95 0.0 37.894737 1 TTGTACG 30 1.1397258E-4 37.500004 1 CATCCGG 30 1.1397258E-4 37.500004 2 TTTCGCG 195 0.0 36.923077 1 CACGCCG 110 0.0 36.81818 26 TATTGCG 55 2.748493E-9 36.81818 1 GCCGATT 165 0.0 36.81818 9 CGGTAGT 110 0.0 36.81818 12 CTTTGCG 190 0.0 36.71053 1 TGGGCGA 1355 0.0 36.531364 6 GTTTGCG 175 0.0 36.0 1 CGGGTCT 25 0.002106867 36.0 6 >>END_MODULE