##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933686.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 767928 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.095827994291135 33.0 31.0 34.0 30.0 34.0 2 32.284107364232064 34.0 31.0 34.0 30.0 34.0 3 32.41768108468502 34.0 31.0 34.0 30.0 34.0 4 35.95497754997864 37.0 35.0 37.0 35.0 37.0 5 35.96583924534592 37.0 35.0 37.0 35.0 37.0 6 35.93839917283912 37.0 35.0 37.0 35.0 37.0 7 35.98867471950496 37.0 35.0 37.0 35.0 37.0 8 35.80893911929243 37.0 35.0 37.0 35.0 37.0 9 37.589521413465846 39.0 37.0 39.0 35.0 39.0 10 37.0871357731454 39.0 37.0 39.0 33.0 39.0 11 37.145922534404264 39.0 37.0 39.0 34.0 39.0 12 37.096589784458956 39.0 37.0 39.0 33.0 39.0 13 37.025899563500744 39.0 37.0 39.0 33.0 39.0 14 37.980029377754164 40.0 37.0 41.0 33.0 41.0 15 38.02898709253993 40.0 37.0 41.0 33.0 41.0 16 38.15860731735267 40.0 37.0 41.0 33.0 41.0 17 38.15755904199352 40.0 37.0 41.0 33.0 41.0 18 37.95624068923128 39.0 37.0 41.0 33.0 41.0 19 37.73533846923149 39.0 37.0 41.0 33.0 41.0 20 37.385471033742746 39.0 35.0 40.0 33.0 41.0 21 37.24545660530675 39.0 35.0 40.0 33.0 41.0 22 37.307634309466515 39.0 35.0 40.0 33.0 41.0 23 37.24216332781198 39.0 35.0 40.0 33.0 41.0 24 37.15236975341438 39.0 35.0 40.0 33.0 41.0 25 37.05775671677553 39.0 35.0 40.0 33.0 41.0 26 36.98591925284662 38.0 35.0 40.0 33.0 41.0 27 36.88984904834828 38.0 35.0 40.0 32.0 41.0 28 36.719592201352214 38.0 35.0 40.0 32.0 41.0 29 36.60675219551833 38.0 35.0 40.0 31.0 41.0 30 36.52268181392005 38.0 35.0 40.0 31.0 41.0 31 36.227685408007 38.0 35.0 40.0 30.0 41.0 32 35.91720577970852 38.0 35.0 40.0 30.0 41.0 33 35.534741538269216 38.0 35.0 40.0 27.0 41.0 34 35.17657905428634 38.0 35.0 40.0 24.0 41.0 35 35.00033596899709 38.0 35.0 40.0 23.0 41.0 36 34.970592295111 38.0 35.0 40.0 23.0 41.0 37 34.899334312591805 38.0 35.0 40.0 23.0 41.0 38 34.875515673344374 38.0 35.0 40.0 22.0 41.0 39 34.80383838068152 38.0 34.0 40.0 22.0 41.0 40 34.69960725484681 38.0 34.0 40.0 21.0 41.0 41 34.548720713400215 38.0 34.0 40.0 20.0 41.0 42 34.383744309362335 38.0 34.0 40.0 19.0 41.0 43 34.24848293069142 38.0 34.0 40.0 18.0 41.0 44 34.194070277421844 38.0 34.0 40.0 18.0 41.0 45 34.248032367617796 38.0 34.0 40.0 20.0 41.0 46 34.08870362846517 38.0 33.0 40.0 20.0 41.0 47 33.927810940609014 37.0 33.0 40.0 18.0 41.0 48 33.86258737798335 37.0 33.0 40.0 18.0 41.0 49 33.90163270514944 37.0 33.0 40.0 18.0 41.0 50 33.805692721192614 37.0 33.0 40.0 18.0 41.0 51 32.668316560927586 36.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 2.0 10 3.0 11 5.0 12 13.0 13 3.0 14 27.0 15 36.0 16 50.0 17 95.0 18 179.0 19 394.0 20 648.0 21 1130.0 22 1881.0 23 3087.0 24 5519.0 25 10412.0 26 16209.0 27 18183.0 28 17650.0 29 16586.0 30 17397.0 31 19678.0 32 23863.0 33 32087.0 34 47270.0 35 56242.0 36 73410.0 37 99306.0 38 163893.0 39 142619.0 40 47.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.61149482764009 4.842771718181913 44.18552260107718 28.36021085310081 2 33.074064235188715 4.722578158369014 45.16569261701618 17.03766498942609 3 19.387755102040817 4.920252940379828 56.50178141700785 19.190210540571513 4 16.359997291412736 5.087846777302039 56.4410986446646 22.11105728662062 5 14.896839287016492 5.717983977664573 56.3309320665479 23.05424466877103 6 18.80319509120647 6.3607525705534895 59.404527507787186 15.431524830452856 7 69.62944442708171 2.3987925951391276 22.457574147576334 5.514188830202831 8 69.22055192674314 2.929571522330219 21.42974341344501 6.420133137481638 9 62.49400985509058 5.93974955985457 24.643716598431105 6.922523986623746 10 28.18753841505974 27.135486660207732 29.46955964621683 15.207415278515693 11 23.45636570095113 18.486628954797844 37.674625746163706 20.382379598087322 12 20.461032805158816 16.896636142971737 41.32470752466377 21.317623527205676 13 21.898146701253243 16.722270837891053 44.27628631850903 17.10329614234668 14 18.43271765061308 19.10960402537738 44.156743861403676 18.30093446260587 15 14.317878759467034 19.08889895927743 46.45435509579023 20.138867185465305 16 16.074814305507807 20.34761071350439 42.573652738277545 21.003922242710253 17 16.470163869529436 20.586825848256606 40.65719702888813 22.28581325332583 18 17.313602316883873 19.063636174224666 42.66975549791126 20.953006010980197 19 16.9991197091394 22.475023700138554 41.29736121094686 19.228495379775186 20 16.874889312539718 25.520100842787347 38.69386192455543 18.91114792011751 21 15.965559271181673 26.34491775270598 39.530268462668374 18.15925451344397 22 15.298048775406029 23.240069381504515 39.01212092800367 22.44976091508579 23 14.23740246481441 24.863007990332427 37.546098071694225 23.35349147315894 24 14.742658165869718 23.91786730005938 38.180141888302025 23.159332645768874 25 15.94706795428738 25.052478878228168 35.12686085153817 23.873592315946286 26 15.017553728995425 25.017840214186748 36.82181141982061 23.14279463699722 27 16.40466293715036 23.43370732672855 38.292782656707395 21.868847079413694 28 14.659707680928422 22.570475357064726 37.65509266493734 25.114724297069518 29 16.452974758050235 20.902350220333158 36.542748799366606 26.101926222250004 30 19.88063985165276 20.82825473221448 35.96170474315301 23.32940067297976 31 18.03294058818014 23.86343511370858 33.53934223000073 24.56428206811055 32 17.361914137783753 22.72439603712848 32.3598045650113 27.553885260076466 33 18.120969674240293 20.687095665218614 33.403522205206734 27.788412455334356 34 16.12221458261712 19.921919763311145 34.085877842714424 29.869987811357312 35 14.727552583054662 20.856382369180444 34.16921898928024 30.24684605848465 36 15.625553437301415 22.497812294902648 33.85721057182444 28.019423695971497 37 15.139830817472472 23.049686949818213 35.39693825462803 26.41354397808128 38 15.467205258826347 22.718015230594535 34.1499463491369 27.66483316144222 39 16.529935098082113 21.874576783240094 33.69664864414372 27.89883947453407 40 18.383494285922637 20.38810930191372 35.03075809190445 26.19763832025919 41 16.122995905866176 22.421372837036806 32.895922534404264 28.55970872269275 42 17.793855673969436 24.683694304674397 32.13686699794772 25.385583023408444 43 17.11462532945797 23.333697950849558 35.90740277734371 23.64427394234876 44 18.49066579158463 21.393672323446992 33.720999885405924 26.39466199956246 45 20.18848121178027 19.11793814003396 33.08487254013397 27.608708108051793 46 20.511949036888875 20.337193070183663 34.026627496327784 25.124230396599685 47 16.55194236959715 23.513662739215135 35.868597055974 24.06579783521372 48 16.80066360387953 23.513923180298153 35.50541196570512 24.180001250117197 49 20.880733610442643 19.882202498150868 35.32792136762822 23.90914252377827 50 18.91596608015335 19.28865726995239 34.365200904251445 27.43017574564282 51 17.43718161077601 18.638466106197455 32.74317383921409 31.181178443812442 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 738.0 1 1446.0 2 2154.0 3 19001.0 4 35848.0 5 22414.0 6 8980.0 7 8724.0 8 8468.0 9 8543.5 10 8619.0 11 8442.5 12 8266.0 13 7876.0 14 7486.0 15 7055.0 16 6624.0 17 6250.5 18 5877.0 19 5604.5 20 5332.0 21 5091.5 22 4851.0 23 4809.5 24 4768.0 25 5031.5 26 5613.0 27 5931.0 28 6701.5 29 7472.0 30 8097.0 31 8722.0 32 9909.5 33 11097.0 34 12206.0 35 13315.0 36 14300.5 37 15286.0 38 16735.0 39 18184.0 40 21391.0 41 24598.0 42 29342.5 43 34087.0 44 40622.0 45 47157.0 46 60374.5 47 73592.0 48 85977.0 49 98362.0 50 96333.0 51 94304.0 52 79446.0 53 64588.0 54 51538.0 55 38488.0 56 32475.0 57 26462.0 58 22815.0 59 19168.0 60 17057.0 61 14946.0 62 13438.5 63 11931.0 64 10458.0 65 8985.0 66 7589.5 67 6194.0 68 5153.0 69 4112.0 70 3420.5 71 2729.0 72 2326.5 73 1924.0 74 1630.0 75 1125.5 76 915.0 77 662.5 78 410.0 79 305.0 80 200.0 81 132.5 82 65.0 83 50.0 84 35.0 85 24.5 86 14.0 87 13.0 88 12.0 89 6.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 767928.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.726913114316574 #Duplication Level Percentage of deduplicated Percentage of total 1 72.7544530450577 29.630642878456896 2 10.039787381165596 8.177790967178863 3 4.71287719303931 5.758228198780684 4 2.7922274820735375 4.548752242312637 5 1.918231338061696 3.9061820519198966 6 1.4728395462084123 3.599052493785567 7 1.1407612738613337 3.252177969930934 8 0.9148921026940149 2.9808584940314833 9 0.7131386571447104 2.613954251519372 >10 3.3439526193480256 21.659379406897898 >50 0.12078782583771934 3.3699907080579177 >100 0.07157791577216426 5.444949045477601 >500 0.0022368098678767438 0.5895365371063532 >1k 0.0019172656010372087 1.391852817737847 >5k 0.0 0.0 >10k+ 3.195442668395348E-4 3.0766519368060257 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23641 3.0785438218166283 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCC 2905 0.37829067308393494 No Hit CTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGCT 2009 0.2616130678917815 No Hit CCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGC 1803 0.234787636340907 No Hit TCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGC 1476 0.19220551926743132 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGC 1425 0.1855642716504672 No Hit GCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGC 1077 0.14024752320530048 No Hit CGCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTG 786 0.10235334562615245 No Hit TCCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTG 785 0.10222312508464335 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.9066162452729944E-4 0.0 0.0 0.2836203394068194 0.0 2 5.208821660363992E-4 0.0 0.0 0.9202685668448084 0.0 3 5.208821660363992E-4 0.0 0.0 1.439197424758571 0.0 4 5.208821660363992E-4 0.0 0.0 2.2379702263753893 0.0 5 5.208821660363992E-4 0.0 0.0 4.006495400610474 0.0 6 5.208821660363992E-4 0.0 0.0 6.257227240053755 0.0 7 5.208821660363992E-4 0.0 0.0 8.414590951235011 0.0 8 5.208821660363992E-4 0.0 0.0 11.550692252398662 0.0 9 5.208821660363992E-4 0.0 0.0 13.435504370201373 0.0 10 5.208821660363992E-4 0.0 0.0 16.10893208738319 0.0 11 5.208821660363992E-4 0.0 0.0 20.87161817253701 0.0 12 5.208821660363992E-4 0.0 0.0 24.933978185454887 0.0 13 5.208821660363992E-4 0.0 0.0 26.40312633476055 0.0 14 5.208821660363992E-4 0.0 0.0 27.066990655373942 0.0 15 5.208821660363992E-4 0.0 0.0 27.782812972049463 0.0 16 5.208821660363992E-4 0.0 0.0 29.207686137242032 0.0 17 6.51102707545499E-4 0.0 0.0 30.87281620151889 0.0 18 6.51102707545499E-4 0.0 0.0 32.48481628486004 0.0 19 7.813232490545989E-4 0.0 0.0 33.46212144888583 0.0 20 7.813232490545989E-4 0.0 0.0 34.444505214030485 0.0 21 7.813232490545989E-4 0.0 0.0 35.559713931514416 0.0 22 7.813232490545989E-4 0.0 0.0 36.52490858517986 0.0 23 7.813232490545989E-4 0.0 0.0 37.20570157618943 0.0 24 7.813232490545989E-4 0.0 0.0 37.62852767446948 0.0 25 7.813232490545989E-4 0.0 0.0 37.944833369795084 0.0 26 7.813232490545989E-4 0.0 0.0 38.22519819566418 0.0 27 7.813232490545989E-4 0.0 0.0 38.503219051786104 0.0 28 7.813232490545989E-4 0.0 0.0 38.75688866664583 0.0 29 7.813232490545989E-4 0.0 0.0 39.0083445322999 0.0 30 7.813232490545989E-4 0.0 0.0 39.316055671885906 0.0 31 7.813232490545989E-4 0.0 0.0 39.54954110281172 0.0 32 7.813232490545989E-4 0.0 0.0 39.80881020095634 0.0 33 9.115437905636987E-4 0.0 0.0 40.022241668489755 0.0 34 9.115437905636987E-4 0.0 0.0 40.26210790594951 0.0 35 9.115437905636987E-4 0.0 0.0 40.53153420633184 0.0 36 0.0010417643320727984 0.0 0.0 40.748090966861476 0.0 37 0.0010417643320727984 0.0 0.0 40.96920544634393 0.0 38 0.0010417643320727984 0.0 0.0 41.263113208529965 0.0 39 0.0010417643320727984 0.0 0.0 41.81954558239835 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGATAG 25 3.8895923E-5 45.0 9 TCGCGCG 30 2.1645574E-6 44.999996 1 CGTTTTT 9870 0.0 43.791794 1 AGACACG 105 0.0 42.857143 24 CTACGAA 90 0.0 42.5 11 TACGAAT 90 0.0 42.5 12 GCTACGA 90 0.0 42.5 10 AGCTACG 90 0.0 42.5 9 AGGCACG 65 0.0 41.53846 10 CGTTAGG 60 3.6379788E-12 41.249996 2 CGACCAA 105 0.0 40.714287 29 GGCGATA 50 1.0804797E-9 40.5 8 CGTTCAT 45 1.9268555E-8 40.0 17 ACGGGAT 45 1.9268555E-8 40.0 5 CGGGCTC 80 0.0 39.375004 6 GTTTTTT 11270 0.0 39.210297 2 TTGGGAC 1780 0.0 38.932587 5 ACACGAC 110 0.0 38.863636 26 CACGACC 110 0.0 38.863636 27 AAACACG 110 0.0 38.863636 40 >>END_MODULE