SRR2933685.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933685.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	774054
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	23195	2.9965609634469947	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCC	2948	0.38085198190307135	No Hit
CTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGCT	2047	0.26445183410976497	No Hit
CCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGC	1770	0.2286662170856297	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGC	1460	0.18861733160735555	No Hit
TCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGC	1443	0.18642110240370827	No Hit
GCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTGC	1147	0.14818087626961426	No Hit
CGCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTG	816	0.10541900177506995	No Hit
TCCTGTCTCTTATACACATCTGACGCCTCTCTCATCGTATGCCGTCTTCTG	807	0.10425629219666846	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTACGGC	20	7.0318585E-4	45.0	12
AACACGC	45	3.8380676E-10	45.0	41
CGAATAT	60	0.0	44.999996	14
CGTTTTT	10380	0.0	44.15462	1
GCTACGA	65	0.0	41.538464	10
CGAGACA	190	0.0	41.44737	22
TAGGGCG	50	1.0804797E-9	40.500004	5
GCGAGAC	195	0.0	40.384617	21
GGATGCG	40	3.45628E-7	39.375	9
TTTCGCG	40	3.45628E-7	39.375	1
AAACACG	195	0.0	39.23077	40
AGACACG	195	0.0	39.23077	24
GTTTTTT	12050	0.0	39.23029	2
AACACGT	145	0.0	38.793102	41
TGGTTCG	35	6.2456456E-6	38.571426	1
TACGAAT	70	0.0	38.571426	12
ATGCGAA	35	6.2456456E-6	38.571426	26
AGCTACG	70	0.0	38.571426	9
ACACGAC	200	0.0	38.250004	26
CACGACC	200	0.0	38.250004	27