##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933680.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 192364 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.695587531970638 31.0 31.0 34.0 30.0 34.0 2 31.87734711276538 33.0 31.0 34.0 30.0 34.0 3 32.05382504002828 33.0 31.0 34.0 30.0 34.0 4 35.6874727079911 37.0 35.0 37.0 33.0 37.0 5 35.7044561352436 37.0 35.0 37.0 35.0 37.0 6 35.65704081844836 37.0 35.0 37.0 35.0 37.0 7 35.75350897257283 37.0 35.0 37.0 35.0 37.0 8 35.51547586866565 37.0 35.0 37.0 33.0 37.0 9 37.30658543178557 39.0 37.0 39.0 34.0 39.0 10 36.65864714811503 39.0 35.0 39.0 32.0 39.0 11 36.745030255141295 39.0 35.0 39.0 32.0 39.0 12 36.95680064877004 39.0 37.0 39.0 33.0 39.0 13 36.93226903162754 39.0 37.0 39.0 33.0 39.0 14 37.8372408558774 39.0 37.0 41.0 33.0 41.0 15 37.82787319872741 39.0 37.0 41.0 33.0 41.0 16 37.9450936765715 39.0 37.0 41.0 33.0 41.0 17 37.98968621987482 39.0 37.0 41.0 33.0 41.0 18 37.86566613295627 39.0 37.0 40.0 33.0 41.0 19 37.69214613961032 39.0 37.0 40.0 33.0 41.0 20 37.30365349025805 39.0 35.0 40.0 33.0 41.0 21 37.148822024911105 39.0 35.0 40.0 32.0 41.0 22 37.19906011519827 39.0 35.0 40.0 33.0 41.0 23 37.164692977896074 39.0 35.0 40.0 32.0 41.0 24 37.06087417604125 39.0 35.0 40.0 32.0 41.0 25 36.96914703374852 38.0 35.0 40.0 32.0 41.0 26 36.96474912145724 38.0 35.0 40.0 32.0 41.0 27 36.91276954107837 38.0 35.0 40.0 32.0 41.0 28 36.859947807282026 38.0 35.0 40.0 32.0 41.0 29 36.8218169719906 39.0 35.0 40.0 32.0 41.0 30 36.75051464931068 39.0 35.0 40.0 31.0 41.0 31 36.51621405252542 38.0 35.0 40.0 31.0 41.0 32 36.26148863612734 38.0 35.0 40.0 30.0 41.0 33 36.09300596785261 39.0 35.0 40.0 30.0 41.0 34 35.96532615250255 39.0 35.0 40.0 29.0 41.0 35 35.81801168617829 39.0 35.0 40.0 27.0 41.0 36 35.7313478613462 39.0 35.0 40.0 27.0 41.0 37 35.51338608055561 39.0 35.0 40.0 25.0 41.0 38 35.366175583789065 38.0 35.0 40.0 25.0 41.0 39 35.30586804183735 39.0 35.0 40.0 24.0 41.0 40 35.27224948535069 39.0 35.0 40.0 24.0 41.0 41 35.19716267077 38.0 35.0 40.0 24.0 41.0 42 35.187602669938244 39.0 35.0 40.0 24.0 41.0 43 35.05162608388264 38.0 35.0 40.0 23.0 41.0 44 34.942795949346035 38.0 35.0 40.0 23.0 41.0 45 34.91329978582271 38.0 35.0 40.0 23.0 41.0 46 34.58629993138009 38.0 34.0 40.0 22.0 41.0 47 34.36281736707492 38.0 33.0 40.0 21.0 41.0 48 34.35514961219355 38.0 34.0 40.0 21.0 41.0 49 34.50863987024599 38.0 34.0 40.0 21.0 41.0 50 34.47125241729222 38.0 34.0 40.0 20.0 41.0 51 33.39134141523362 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 4.0 12 1.0 13 6.0 14 3.0 15 5.0 16 9.0 17 21.0 18 46.0 19 103.0 20 139.0 21 272.0 22 429.0 23 697.0 24 1225.0 25 2081.0 26 3136.0 27 3806.0 28 3777.0 29 3940.0 30 4105.0 31 4966.0 32 5999.0 33 7880.0 34 11215.0 35 14852.0 36 20029.0 37 27399.0 38 45012.0 39 31204.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.059782495685262 4.9120417541743775 44.744858705371065 25.283317044769294 2 31.66496849722401 5.363789482439542 42.9716578985673 19.999584121769146 3 20.546983843130732 5.341436027531139 52.71204591295668 21.399534216381443 4 16.11060281549562 5.363789482439542 54.06728909775218 24.458318604312655 5 13.294067497036869 7.190534611465763 55.41577426129629 24.099623630201076 6 17.782953151317294 8.262980599280532 59.31827161007257 14.635794639329605 7 68.05535339252667 2.642906157077208 23.094238007111517 6.207502443284606 8 65.77893992638955 3.4029236239629035 22.19126239836976 8.626874051277786 9 59.19766692312491 6.127965731633777 26.048013141752097 8.62635420348922 10 27.284731030754195 21.475951841300866 32.677112141564955 18.56220498637999 11 16.31958162649976 19.324301844419953 38.4183111185045 25.93780541057578 12 15.528373292300016 14.127903349899148 45.89424216589383 24.44948119190701 13 20.48408226071406 15.490424403734588 48.267347320704495 15.758146014846853 14 18.104738932440583 18.057432783680937 45.034933771391735 18.802894512486745 15 11.826017342122226 18.145806907737413 47.48705579006467 22.54111996007569 16 10.330415254413507 18.342309371815933 43.70412343265892 27.62315194111164 17 10.016427190118733 18.51177975088894 42.32860618410929 29.143186874883035 18 11.572851469089851 16.76249194235928 46.78110249319 24.88355409536088 19 11.833815058950739 19.908610758769832 48.16597700193383 20.091597180345595 20 11.97573350522967 24.377222349296126 44.08725125283317 19.559792892641035 21 10.643363623131147 26.74097024391258 43.76182653718991 18.85383959576636 22 8.84728951363041 24.137572518766508 40.803892620240795 26.211245347362294 23 9.617184088498886 24.40737352103304 37.74978686240669 28.225655528061385 24 11.413778045788193 22.872263001393193 37.77473955625793 27.939219396560688 25 10.010189016655923 25.939884801730052 34.589112307916245 29.460813873697784 26 9.515293921939657 26.21176519515086 38.2696346509742 26.00330623193529 27 12.799692250109167 24.766068495144623 40.31523569898734 22.119003555758873 28 10.848703499615313 20.66394959555842 40.44103886382067 28.04630804100559 29 12.481025555717286 19.251523154020504 37.721715081824044 30.545736208438168 30 19.69027468757148 20.661350356615582 34.986276018381815 24.66209893743112 31 18.577800420037015 27.793662015761782 28.1726310536275 25.455906510573705 32 14.454887608908113 27.598719095048967 28.10349129774802 29.842901998294902 33 17.741365328231893 20.412863113680316 29.594414755359633 32.25135680272816 34 18.59339585369404 16.796801896404734 28.918612630221872 35.691189619679356 35 13.601297540080266 17.244910690149922 30.877399097544238 38.276392672225576 36 16.1589486598324 16.65748268906864 37.26944750577031 29.914121145328647 37 20.757002349712003 19.459982117236073 36.6840988958433 23.098916637208625 38 20.882285666756772 24.74839367033333 30.479195691501527 23.890124971408373 39 17.68626146264374 20.637957206130046 28.95864090994157 32.71714042128465 40 16.65592314570294 14.915472749578923 30.877918945332805 37.55068515938533 41 13.817554220124348 14.780832172339938 37.553804246116734 33.84780936141898 42 17.384229897486016 14.360795159177393 45.35619970472646 22.898775238610135 43 18.38025826038136 15.31003722110166 44.97567112349504 21.334033395021937 44 19.023309974839368 16.391840469110644 33.660664157534676 30.924185398515313 45 22.25104489405502 13.876816868021043 29.63600257844503 34.236135659478904 46 23.30633590484706 14.290095859932212 36.048325050425234 26.35524318479549 47 15.051153022395042 19.261920109791852 42.00630055519744 23.680626312615665 48 14.766276434260048 18.525295793391695 43.779501362001206 22.92892641034705 49 21.49674575284357 12.26944750577031 42.31145120708656 23.92235553429956 50 20.73516874259217 9.836559855274375 36.646669855066435 32.78160154706702 51 17.377471876234637 9.581314591087729 33.3050882701545 39.73612526252313 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 281.0 1 519.0 2 757.0 3 4620.5 4 8484.0 5 5232.5 6 1981.0 7 1891.5 8 1802.0 9 1772.0 10 1742.0 11 1677.0 12 1612.0 13 1512.0 14 1412.0 15 1322.0 16 1232.0 17 1135.5 18 1039.0 19 957.5 20 876.0 21 823.0 22 770.0 23 743.5 24 717.0 25 662.5 26 637.5 27 667.0 28 751.0 29 835.0 30 958.5 31 1082.0 32 1116.0 33 1150.0 34 1350.0 35 1550.0 36 1762.5 37 1975.0 38 2371.0 39 2767.0 40 3697.0 41 4627.0 42 6594.5 43 8562.0 44 10752.0 45 12942.0 46 17888.0 47 22834.0 48 28678.0 49 34522.0 50 34244.5 51 33967.0 52 27240.5 53 20514.0 54 14941.0 55 9368.0 56 6615.5 57 3863.0 58 3002.0 59 2141.0 60 1857.0 61 1573.0 62 1417.0 63 1261.0 64 1065.5 65 870.0 66 767.0 67 664.0 68 524.5 69 385.0 70 357.0 71 329.0 72 295.0 73 261.0 74 206.0 75 122.5 76 94.0 77 74.5 78 55.0 79 38.0 80 21.0 81 14.5 82 8.0 83 8.0 84 8.0 85 5.0 86 2.0 87 1.5 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 192364.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.49385539913913 #Duplication Level Percentage of deduplicated Percentage of total 1 75.07618498538072 37.90886028570834 2 12.64361899271095 12.768501382795117 3 5.006588971708602 7.584059387411365 4 2.3977679858337106 4.842901998294899 5 1.229255034386196 3.1034912977480196 6 0.7875880245439196 2.3861013495248593 7 0.5106453074167113 1.8049115219063858 8 0.37474776592678005 1.5137967603085816 9 0.27694271712720836 1.2585514961219355 >10 1.533994975909072 14.14869726144185 >50 0.11324795124160936 3.841155309725312 >100 0.04324012683770539 3.5708344596702086 >500 0.0030885804884075276 1.255952257179098 >1k 0.002059053658938352 1.0698467488719303 >5k 0.001029526829469176 2.942338483292092 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5660 2.942338483292092 No Hit CTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGCT 1054 0.5479195691501528 TruSeq Adapter, Index 16 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 1004 0.5219271797217775 TruSeq Adapter, Index 13 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 868 0.45122788047659645 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTGC 842 0.4377118379738413 TruSeq Adapter, Index 13 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCC 706 0.36701253872866024 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGC 378 0.19650246407851782 No Hit TCCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 367 0.19078413840427522 TruSeq Adapter, Index 16 (95% over 21bp) TTCCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCT 257 0.1336008816618494 No Hit GGCCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCT 257 0.1336008816618494 No Hit GCCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 233 0.12112453473622922 No Hit TGCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCTG 216 0.1122871223305816 TruSeq Adapter, Index 16 (95% over 21bp) GTGCCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTC 212 0.11020773117631157 No Hit TGCCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTCT 210 0.10916803559917657 No Hit GCTCCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTC 203 0.105529101079204 No Hit GTTCCTGTCTCTTATACACATCTGACGCCTGACCTTTCGTATGCCGTCTTC 199 0.10344970992493398 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 193 0.10033062319352894 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5926264789669585 0.0 2 0.0 0.0 0.0 2.1906385810234763 0.0 3 0.0 0.0 0.0 3.1118088623650997 0.0 4 0.0 0.0 0.0 4.619367449210871 0.0 5 0.0 0.0 0.0 7.735854941673078 0.0 6 0.0 0.0 0.0 10.397995466927284 0.0 7 0.0 0.0 0.0 12.890665613108482 0.0 8 0.0 0.0 0.0 16.633569690794534 0.0 9 0.0 0.0 0.0 18.35374602316442 0.0 10 5.198477885675074E-4 0.0 0.0 22.392443492545382 0.0 11 5.198477885675074E-4 0.0 0.0 31.627539456447153 0.0 12 5.198477885675074E-4 0.0 0.0 40.05167287018361 0.0 13 5.198477885675074E-4 0.0 0.0 42.799588280551454 0.0 14 5.198477885675074E-4 0.0 0.0 43.672932565344865 0.0 15 5.198477885675074E-4 0.0 0.0 44.960075689838014 0.0 16 5.198477885675074E-4 0.0 0.0 48.21640223742488 0.0 17 5.198477885675074E-4 0.0 0.0 52.181281320829264 0.0 18 5.198477885675074E-4 0.0 0.0 56.01515876151463 0.0 19 5.198477885675074E-4 0.0 0.0 58.21723399388659 0.0 20 5.198477885675074E-4 0.0 0.0 60.14846852841488 0.0 21 5.198477885675074E-4 0.0 0.0 62.44047742820902 0.0 22 5.198477885675074E-4 0.0 0.0 64.27242103512091 0.0 23 5.198477885675074E-4 0.0 0.0 65.56164355076834 0.0 24 5.198477885675074E-4 0.0 0.0 66.27435486889439 0.0 25 5.198477885675074E-4 0.0 0.0 66.71934457590818 0.0 26 5.198477885675074E-4 0.0 0.0 67.04632883491713 0.0 27 5.198477885675074E-4 0.0 0.0 67.32288785843505 0.0 28 5.198477885675074E-4 0.0 0.0 67.59112931733588 0.0 29 5.198477885675074E-4 0.0 0.0 67.82817990892266 0.0 30 5.198477885675074E-4 0.0 0.0 68.05691293589237 0.0 31 5.198477885675074E-4 0.0 0.0 68.2404192052567 0.0 32 5.198477885675074E-4 0.0 0.0 68.41196897548397 0.0 33 5.198477885675074E-4 0.0 0.0 68.56428437753426 0.0 34 5.198477885675074E-4 0.0 0.0 68.693206629099 0.0 35 5.198477885675074E-4 0.0 0.0 68.82524796739514 0.0 36 5.198477885675074E-4 0.0 0.0 68.95988854463413 0.0 37 5.198477885675074E-4 0.0 0.0 69.08621155725604 0.0 38 5.198477885675074E-4 0.0 0.0 69.22345137343785 0.0 39 5.198477885675074E-4 0.0 0.0 69.37992555779668 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAGAC 20 7.01863E-4 45.0 21 CTGCTCG 20 7.01863E-4 45.0 1 TTAGGGT 40 6.7648216E-9 45.0 4 CGTGGGA 40 6.7648216E-9 45.0 4 TCGTTCA 20 7.01863E-4 45.0 16 ACACGAC 20 7.01863E-4 45.0 26 GGATGTC 25 3.8786617E-5 45.0 8 CCGATCC 20 7.01863E-4 45.0 42 GCTGGAT 40 6.7648216E-9 45.0 4 GACACGA 20 7.01863E-4 45.0 25 CTTCAGG 25 3.8786617E-5 45.0 2 TATGGGT 25 3.8786617E-5 45.0 4 TATGGGA 45 3.8198777E-10 45.0 4 GGGTACG 20 7.01863E-4 45.0 7 TCGGGTA 25 3.8786617E-5 45.0 5 CGACCAA 20 7.01863E-4 45.0 29 ATGCTGG 20 7.01863E-4 45.0 2 AGGGTTG 20 7.01863E-4 45.0 6 CACGACC 20 7.01863E-4 45.0 27 CCTCGTT 20 7.01863E-4 45.0 14 >>END_MODULE