##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933676.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 65769 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.02721646976539 33.0 31.0 34.0 30.0 34.0 2 32.22750840061427 34.0 31.0 34.0 30.0 34.0 3 32.28391795526768 33.0 31.0 34.0 30.0 34.0 4 35.9076160501148 37.0 35.0 37.0 35.0 37.0 5 35.92928279280512 37.0 35.0 37.0 35.0 37.0 6 35.89893414830696 37.0 35.0 37.0 35.0 37.0 7 35.95446182852103 37.0 35.0 37.0 35.0 37.0 8 35.76976995240919 37.0 35.0 37.0 35.0 37.0 9 37.6138302239657 39.0 37.0 39.0 35.0 39.0 10 37.133847253265216 39.0 37.0 39.0 33.0 39.0 11 37.15356779029634 39.0 37.0 39.0 34.0 39.0 12 37.24119265915553 39.0 37.0 39.0 34.0 39.0 13 37.17947665313446 39.0 37.0 39.0 33.0 39.0 14 38.28543842843893 40.0 38.0 41.0 33.0 41.0 15 38.329395307819794 40.0 38.0 41.0 34.0 41.0 16 38.42881904848789 40.0 38.0 41.0 34.0 41.0 17 38.40818622755401 40.0 38.0 41.0 34.0 41.0 18 38.00405966336724 39.0 37.0 40.0 34.0 41.0 19 37.54402530067357 38.0 37.0 40.0 34.0 41.0 20 36.97468412169867 38.0 35.0 40.0 33.0 41.0 21 36.827319861941035 38.0 35.0 40.0 33.0 41.0 22 36.86295975307516 38.0 35.0 40.0 33.0 41.0 23 36.81777129042558 38.0 35.0 40.0 33.0 41.0 24 36.70685277258283 38.0 35.0 40.0 33.0 41.0 25 36.594033663276015 38.0 35.0 40.0 33.0 41.0 26 36.527984308716874 38.0 35.0 40.0 33.0 41.0 27 36.43584363453907 38.0 35.0 40.0 32.0 41.0 28 36.31163618117958 38.0 35.0 40.0 32.0 41.0 29 36.194711794310386 38.0 35.0 40.0 31.0 41.0 30 35.96460338457328 38.0 35.0 40.0 31.0 41.0 31 35.427587465219176 37.0 35.0 40.0 29.0 41.0 32 34.90030257416108 37.0 35.0 40.0 25.0 41.0 33 34.38632182335143 37.0 34.0 40.0 21.0 41.0 34 33.84345208228801 37.0 33.0 40.0 18.0 41.0 35 33.48655141480029 37.0 33.0 40.0 15.0 41.0 36 33.2011586005565 37.0 33.0 40.0 13.0 41.0 37 32.836153811066005 37.0 32.0 40.0 10.0 41.0 38 32.66622572944701 37.0 32.0 40.0 10.0 41.0 39 32.58995879517706 37.0 32.0 40.0 10.0 41.0 40 32.299578828931566 36.0 31.0 40.0 10.0 41.0 41 32.09472547856893 36.0 31.0 40.0 10.0 41.0 42 32.05522358557983 36.0 31.0 40.0 10.0 41.0 43 31.956438443643663 36.0 31.0 40.0 10.0 41.0 44 31.844774893946997 36.0 31.0 40.0 9.0 41.0 45 31.78600860587815 36.0 30.0 40.0 9.0 41.0 46 31.48638416275145 35.0 29.0 40.0 8.0 41.0 47 31.232678009396523 35.0 28.0 39.0 8.0 41.0 48 31.24180084842403 35.0 28.0 39.0 8.0 41.0 49 31.394121850719944 35.0 29.0 39.0 8.0 41.0 50 31.31677538049841 35.0 29.0 39.0 8.0 41.0 51 30.389894935303868 35.0 26.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 2.0 13 1.0 14 4.0 15 2.0 16 9.0 17 13.0 18 29.0 19 52.0 20 101.0 21 184.0 22 249.0 23 415.0 24 700.0 25 1338.0 26 2122.0 27 2358.0 28 2251.0 29 2009.0 30 1939.0 31 1971.0 32 2249.0 33 2737.0 34 3787.0 35 5701.0 36 7405.0 37 8278.0 38 11997.0 39 7860.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.65153795861272 4.7377944016177835 36.620596329577765 36.99007131019173 2 42.477458985236204 4.751478660159041 36.39252535389013 16.378537000714623 3 17.444388693761496 5.508674299441986 60.104304459547805 16.942632547248703 4 14.16320759020207 4.839666104091593 60.35366205963296 20.64346424607338 5 11.280390457510377 6.255226626526175 61.566999650291166 20.89738326567228 6 15.432802688196567 7.056515987775396 65.71180951512112 11.79887180890693 7 58.06991135641412 2.993811674193009 34.155909318980065 4.780367650412808 8 56.65283036080828 3.2462102206206573 33.93848165549119 6.16247776307987 9 52.567318949657135 4.7149873040490204 36.325624534355086 6.392069211938756 10 25.86172816980644 16.688713527649803 41.77195943377579 15.677598868767962 11 16.4256716690234 15.411516063799056 46.07945992792957 22.083352339247973 12 14.379114780519696 13.142970092292721 53.40357919384513 19.074335933342457 13 17.49304383524153 14.339582478067175 54.34323161367818 13.824142073013121 14 15.172801775912664 16.675029269108546 52.275388100776965 15.876780854201828 15 11.128343140385288 15.431282215025316 54.35235445270569 19.088020191883714 16 11.395946418525444 14.886952819717497 51.37678845656768 22.340312305189375 17 11.195243959920328 15.43888458088157 49.23900317778892 24.126868281409173 18 12.226124770028433 14.356307682950934 52.55211421794462 20.865453329076008 19 12.76741321899375 16.88941598625492 52.90486399367483 17.438306801076493 20 13.296537882589062 19.55328498228649 50.56181483677721 16.588362298347246 21 12.881448706837567 20.66779181681339 50.355030485487084 16.095728990861957 22 11.085769891590262 19.11690918213748 48.405783879943435 21.391537046328818 23 11.411151150237954 19.96381273852423 45.839225166871934 22.785810944365885 24 12.992443248338883 19.106265869938724 46.138758381608355 21.762532500114034 25 12.432909121318554 20.722528850978424 43.72728793200444 23.11727409569858 26 12.127294013897124 21.692590734236493 45.46975018625796 20.710365065608418 27 13.407532424090377 20.666271343642144 46.61162553786738 19.314570694400096 28 11.502379540513008 19.02872173820493 47.09209505998267 22.376803661299398 29 14.243792668278369 18.200063859873193 45.17173744469279 22.384406027155652 30 19.261354133406318 19.598899177424016 42.094299746080985 19.045446943088688 31 17.39725402545272 26.54898204321185 36.88819960771792 19.16556432361751 32 15.88286274688683 27.28793200443978 34.86292934361173 21.966275905061654 33 18.25023947452447 21.678906475695236 34.57099849473156 25.499855555048732 34 18.84322401131232 23.108151256671075 34.458483480058995 23.590141251957608 35 21.015980173029845 22.66873451017957 31.873679088932477 24.44160622785811 36 22.09399565144673 23.637275920266386 31.122565342334536 23.14616308595235 37 16.5123386397847 29.597530751569888 31.718590825464887 22.171539783180524 38 17.17374446927884 32.82853624047804 29.912268698018824 20.085450592224298 39 22.423938329608173 26.445589867566788 31.190986635040822 19.939485167784216 40 23.266280466481167 26.611321443233134 31.634964801046085 18.48743328923961 41 17.993279508583072 29.883379707765055 29.419635390533532 22.70370539311834 42 17.448950113275252 26.6432513798294 31.152974805759552 24.754823701135795 43 18.00696376712433 22.478675363773206 34.78386473870669 24.730496130395778 44 18.920768143046114 22.045340509966703 34.30795663610516 24.72593471088203 45 22.56990375404826 20.842646231507246 32.63999756724292 23.94745244720157 46 22.916571637093462 22.635284100412047 35.500007602365855 18.948136660128633 47 15.84485091760556 26.374127628517996 38.47861454484636 19.30240690903009 48 15.257948273502715 24.370143988809318 39.153704632881755 21.218203104806214 49 19.921239489729203 18.866031108881085 40.27125241375116 20.941476987638552 50 19.48942510909395 16.950234913104957 37.611944837233345 25.948395140567744 51 17.350119357143942 16.96696011798872 35.16550350469066 30.51741702017668 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 238.0 1 415.0 2 592.0 3 3593.5 4 6595.0 5 4047.0 6 1499.0 7 1428.0 8 1357.0 9 1326.0 10 1295.0 11 1222.0 12 1149.0 13 1072.5 14 996.0 15 909.0 16 822.0 17 752.5 18 683.0 19 633.5 20 584.0 21 530.5 22 477.0 23 460.5 24 444.0 25 410.0 26 387.0 27 398.0 28 382.0 29 366.0 30 392.0 31 418.0 32 462.0 33 506.0 34 539.5 35 573.0 36 642.0 37 711.0 38 819.5 39 928.0 40 1161.5 41 1395.0 42 1828.5 43 2262.0 44 2665.0 45 3068.0 46 4177.0 47 5286.0 48 6737.5 49 8189.0 50 8225.0 51 8261.0 52 6821.0 53 5381.0 54 4080.0 55 2779.0 56 2290.0 57 1801.0 58 1605.0 59 1409.0 60 1290.5 61 1172.0 62 1111.0 63 1050.0 64 937.5 65 825.0 66 733.0 67 641.0 68 534.0 69 427.0 70 372.0 71 317.0 72 268.5 73 220.0 74 178.5 75 106.5 76 76.0 77 54.5 78 33.0 79 26.0 80 19.0 81 14.5 82 10.0 83 6.5 84 3.0 85 2.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 65769.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.0368258602077 #Duplication Level Percentage of deduplicated Percentage of total 1 80.63282762677385 50.02204686098314 2 11.203156785372908 13.900165731575667 3 3.972941839660793 7.394061031793093 4 1.5955491286978258 3.959312137937326 5 0.862723952844293 2.6760327814015725 6 0.4558711796279503 1.696848059115997 7 0.27940491654616306 1.213337590658213 8 0.15930982083772458 0.7906460490504644 9 0.12744785667017966 0.711581444145418 >10 0.6519448052743806 6.782830816950234 >50 0.03676380480870567 1.4262038346333379 >100 0.019607362564643023 2.6471437911478053 >500 0.0 0.0 >1k 0.002450920320580378 6.779789870607733 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4459 6.779789870607733 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCC 330 0.5017561465127948 No Hit CCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCTGC 304 0.46222384406027156 Illumina Single End Adapter 1 (95% over 24bp) CTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCTGCT 281 0.42725296112150096 Illumina Single End Adapter 1 (96% over 25bp) TCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCTGC 220 0.33450409767519657 Illumina Single End Adapter 1 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCTGC 217 0.32994267816144385 Illumina Single End Adapter 1 (95% over 24bp) CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGC 150 0.228070975687634 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 130 0.1976615122626161 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 109 0.16573157566634739 No Hit GTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 90 0.13684258541258038 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 87 0.1322811658988277 No Hit GCCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCTG 72 0.10947406833006432 Illumina Single End Adapter 1 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0015204731712508933 0.0 0.0 0.4789490489440314 0.0 2 0.0015204731712508933 0.0 0.0 1.765269351822287 0.0 3 0.0015204731712508933 0.0 0.0 2.464687010597698 0.0 4 0.0015204731712508933 0.0 0.0 3.4438717328832733 0.0 5 0.0015204731712508933 0.0 0.0 5.5588499140932655 0.0 6 0.0015204731712508933 0.0 0.0 7.131019173166689 0.0 7 0.0015204731712508933 0.0 0.0 8.566345846827533 0.0 8 0.0015204731712508933 0.0 0.0 10.713253964633793 0.0 9 0.0015204731712508933 0.0 0.0 11.64074259909684 0.0 10 0.0015204731712508933 0.0 0.0 14.05981541455701 0.0 11 0.0015204731712508933 0.0 0.0 19.91667807021545 0.0 12 0.0015204731712508933 0.0 0.0 25.19271997445605 0.0 13 0.0015204731712508933 0.0 0.0 26.85763809697578 0.0 14 0.0015204731712508933 0.0 0.0 27.427815536194863 0.0 15 0.0015204731712508933 0.0 0.0 28.30512855600663 0.0 16 0.0015204731712508933 0.0 0.0 30.395779166476608 0.0 17 0.0015204731712508933 0.0 0.0 32.9349693624656 0.0 18 0.0015204731712508933 0.0 0.0 35.29626419741824 0.0 19 0.0015204731712508933 0.0 0.0 36.66164910520154 0.0 20 0.0015204731712508933 0.0 0.0 37.82024966169472 0.0 21 0.0015204731712508933 0.0 0.0 39.298149584150586 0.0 22 0.0015204731712508933 0.0 0.0 40.33055086742994 0.0 23 0.0015204731712508933 0.0 0.0 41.18809773601545 0.0 24 0.0015204731712508933 0.0 0.0 41.64271921421947 0.0 25 0.0015204731712508933 0.0 0.0 41.94225242895589 0.0 26 0.0015204731712508933 0.0 0.0 42.17184387781477 0.0 27 0.0015204731712508933 0.0 0.0 42.32845261445362 0.0 28 0.0015204731712508933 0.0 0.0 42.49266371694871 0.0 29 0.0015204731712508933 0.0 0.0 42.67664097067007 0.0 30 0.0015204731712508933 0.0 0.0 42.84237254633642 0.0 31 0.0015204731712508933 0.0 0.0 43.00810412200277 0.0 32 0.0015204731712508933 0.0 0.0 43.125180556189086 0.0 33 0.0015204731712508933 0.0 0.0 43.258982195259165 0.0 34 0.0015204731712508933 0.0 0.0 43.41559093189801 0.0 35 0.0015204731712508933 0.0 0.0 43.53722878559808 0.0 36 0.0015204731712508933 0.0 0.0 43.65886663929815 0.0 37 0.0015204731712508933 0.0 0.0 43.79570922471073 0.0 38 0.0015204731712508933 0.0 0.0 43.94319512232207 0.0 39 0.0015204731712508933 0.0 0.0 44.08611960041965 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGGGC 35 1.1887278E-7 45.000004 4 TGTTGTG 20 6.9848174E-4 45.0 45 TTATGGG 40 6.6484063E-9 45.0 3 CGTTTGG 20 6.9848174E-4 45.0 2 TGTTGCG 20 6.9848174E-4 45.0 1 ATGGGCC 20 6.9848174E-4 45.0 5 TTGTCCT 20 6.9848174E-4 45.0 1 TTCGTGG 25 3.8506878E-5 45.0 2 CGGGCTC 20 6.9848174E-4 45.0 6 TTGGGTA 25 3.8506878E-5 45.0 5 ATTTGGG 20 6.9848174E-4 45.0 3 TGGGCTT 20 6.9848174E-4 45.0 6 TGGGCCG 20 6.9848174E-4 45.0 6 TTTGTTG 20 6.9848174E-4 45.0 1 TTTCGTG 20 6.9848174E-4 45.0 1 CCTGGCC 20 6.9848174E-4 45.0 29 TCGGGCT 20 6.9848174E-4 45.0 5 GGGTACC 30 2.134324E-6 44.999996 7 TACATGG 30 2.134324E-6 44.999996 2 GTGCTTG 30 2.134324E-6 44.999996 1 >>END_MODULE