##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933674.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 121743 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.95341005232334 33.0 31.0 34.0 30.0 34.0 2 32.150834134200736 33.0 31.0 34.0 30.0 34.0 3 32.21770450867812 33.0 31.0 34.0 30.0 34.0 4 35.885085795487214 37.0 35.0 37.0 35.0 37.0 5 35.917670831177155 37.0 35.0 37.0 35.0 37.0 6 35.871532654854896 37.0 35.0 37.0 35.0 37.0 7 35.94161471296091 37.0 35.0 37.0 35.0 37.0 8 35.74585807808252 37.0 35.0 37.0 35.0 37.0 9 37.55346919330064 39.0 37.0 39.0 35.0 39.0 10 37.097837247316065 39.0 37.0 39.0 33.0 39.0 11 37.13328897760036 39.0 37.0 39.0 34.0 39.0 12 37.23986594711811 39.0 37.0 39.0 34.0 39.0 13 37.188618647478705 39.0 37.0 39.0 33.0 39.0 14 38.21827127637729 40.0 38.0 41.0 33.0 41.0 15 38.26008887574645 40.0 38.0 41.0 33.0 41.0 16 38.3401756158465 40.0 38.0 41.0 34.0 41.0 17 38.36422627995039 40.0 38.0 41.0 34.0 41.0 18 37.99049637350813 39.0 38.0 40.0 34.0 41.0 19 37.56223355757621 38.0 37.0 40.0 34.0 41.0 20 36.96388293372104 38.0 35.0 40.0 33.0 41.0 21 36.847161643790606 38.0 35.0 40.0 33.0 41.0 22 36.861445832614606 38.0 35.0 40.0 33.0 41.0 23 36.81832220332996 38.0 35.0 40.0 33.0 41.0 24 36.714316223520036 38.0 35.0 40.0 33.0 41.0 25 36.623748387997665 38.0 35.0 40.0 33.0 41.0 26 36.57307607008206 38.0 35.0 40.0 33.0 41.0 27 36.52095808383233 38.0 35.0 40.0 32.0 41.0 28 36.411210500809084 38.0 35.0 40.0 32.0 41.0 29 36.34609792760158 38.0 35.0 40.0 32.0 41.0 30 36.1576764167139 38.0 35.0 40.0 31.0 41.0 31 35.7109731154974 38.0 35.0 40.0 30.0 41.0 32 35.10395669566218 38.0 35.0 40.0 26.0 41.0 33 34.545337308921255 38.0 34.0 40.0 21.0 41.0 34 34.16192306744536 38.0 34.0 40.0 18.0 41.0 35 33.820835694865416 38.0 34.0 40.0 16.0 41.0 36 33.45044889644579 37.0 33.0 40.0 15.0 41.0 37 33.0791421272681 37.0 33.0 40.0 12.0 41.0 38 32.8826790862719 37.0 32.0 40.0 10.0 41.0 39 32.820014292402846 37.0 32.0 40.0 10.0 41.0 40 32.88859318400237 37.0 33.0 40.0 10.0 41.0 41 32.67609636693691 37.0 32.0 40.0 10.0 41.0 42 32.246387882670874 36.0 31.0 40.0 10.0 41.0 43 31.903780915535183 36.0 30.0 39.0 10.0 41.0 44 31.995589068776027 36.0 30.0 39.0 10.0 41.0 45 32.15187731532819 37.0 31.0 40.0 10.0 41.0 46 31.946682766154932 36.0 30.0 40.0 10.0 41.0 47 31.62374017397304 36.0 30.0 39.0 9.0 41.0 48 31.524465472347487 35.0 29.0 39.0 8.0 41.0 49 31.619863154349737 36.0 30.0 39.0 8.0 41.0 50 31.608659224760355 36.0 29.0 39.0 8.0 41.0 51 30.583828228317028 35.0 26.0 39.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 3.0 13 2.0 14 2.0 15 2.0 16 6.0 17 16.0 18 41.0 19 80.0 20 150.0 21 264.0 22 390.0 23 766.0 24 1387.0 25 2553.0 26 3710.0 27 4168.0 28 3767.0 29 3371.0 30 3475.0 31 3461.0 32 4170.0 33 5024.0 34 7011.0 35 10245.0 36 13804.0 37 16341.0 38 24968.0 39 12560.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.441068480323306 4.066763592157249 37.49620101361064 36.99596691390881 2 41.926845896684 4.438037505236441 36.825115201695375 16.810001396384187 3 16.678577002373853 5.130479781178384 60.58336002891337 17.607583187534395 4 13.803668383397813 4.341933417116384 61.13205687390651 20.722341325579293 5 11.127539160362403 5.632356685805344 62.22945056389278 21.010653589939462 6 15.11873372596371 6.822568854061424 66.10154177242224 11.95715564755263 7 56.62420015935208 2.139753414980738 35.822182794904016 5.413863630763165 8 53.64168781778008 2.7229491634015917 35.74907797573577 7.88628504308256 9 48.43646041250832 4.660637572591442 38.6149511676236 8.28795084727664 10 23.662962141560502 16.36644406659931 44.18159565642378 15.78899813541641 11 15.53436337202139 14.320330532350937 47.7481251488792 22.39718094674848 12 14.149478820137503 11.787125337801763 54.3809500340882 19.68244580797253 13 18.148887410364456 13.404466786591426 55.36416878177801 13.08247702126611 14 14.929811159573855 16.253090526765398 52.54922254256918 16.26787577109156 15 9.887221441889883 14.725281946395274 55.65083824121305 19.736658370501793 16 8.995178367544746 14.973345490089779 52.10320100539661 23.92827513696886 17 8.731508177061514 15.064521163434447 50.16715540113189 26.036815258372144 18 10.06053736149101 13.936735582333275 54.884469743640295 21.118257312535423 19 10.658518354238026 16.799323164370847 54.994537673623945 17.54762080776718 20 10.794871163023746 20.12682454021997 52.310194425962884 16.768109870793392 21 9.884757234502189 22.033299655832366 51.89867179221803 16.18327131744741 22 7.749932234296838 20.08821862447944 48.92437347527168 23.237475665952047 23 8.495765670305481 20.66812876305003 46.54230633383439 24.293799232810102 24 10.872082994504817 19.204389574759944 46.47659413682923 23.446933293906014 25 8.84732592428312 22.1252967316396 44.71715006201589 24.31022728206139 26 8.713437322885094 22.342968384219215 48.02493777876346 20.91865651413223 27 12.379356513310826 20.65745053103669 48.99994250182762 17.963250453824863 28 8.842397509507734 17.868789170629935 50.4127547374387 22.87605858242363 29 12.140328396704533 16.53401016896249 48.52517187846529 22.80048955586769 30 21.009010785014333 18.184207716254733 44.00827973682265 16.798501761908284 31 18.7879385262397 23.457611525919354 39.64170424582933 18.112745702011615 32 16.76975267571852 24.181267095438752 38.76608922073548 20.282891008107242 33 22.172938074468348 17.74065038646986 37.78533468043337 22.30107685862842 34 21.206147376029833 15.568040872986538 40.257756092752764 22.968055658230863 35 21.862447943618935 16.484726021208612 40.314432862669726 21.33839317250273 36 27.115316691719443 16.451869922706027 42.58725347658592 13.845559908988609 37 24.555005215905638 19.54527159672425 42.32522609102782 13.574497096342295 38 22.14829600059141 23.75249500998004 37.8797959636283 16.21941302580025 39 28.17081885611493 19.74651520005257 35.988106092342065 16.094559851490434 40 33.65039468388326 14.758138044897859 36.10228103463854 15.489186236580338 41 31.134438941047943 14.882169816745112 36.531053120097255 17.45233812210969 42 26.75307820572846 14.220119431918057 44.25223626820433 14.774566094149149 43 21.34332158727812 15.086699029923691 47.43845642049235 16.13152296230584 44 20.839801877726032 16.23009125781359 40.963340808095744 21.966766056364637 45 27.165422241935882 13.754384235643938 36.53762433979777 22.54256918262241 46 30.64406167089689 14.193834553115991 39.95958699884182 15.202516777145297 47 21.5872781186598 18.059354541944916 45.205884527241814 15.14748281215347 48 19.489416229269853 16.925819143605793 45.92379027952326 17.660974347601094 49 23.61121378641893 11.94072759830134 46.39281108564764 18.055247529632094 50 22.89741504645031 10.217425231840844 40.853272878112094 26.03188684359676 51 20.3789950962273 10.223996451541362 37.11589167344324 32.2811167787881 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 221.0 1 366.0 2 511.0 3 6732.5 4 12954.0 5 7834.0 6 2714.0 7 2537.5 8 2361.0 9 2293.5 10 2226.0 11 2058.5 12 1891.0 13 1752.5 14 1614.0 15 1480.5 16 1347.0 17 1232.5 18 1118.0 19 1039.0 20 960.0 21 864.0 22 768.0 23 675.0 24 582.0 25 575.0 26 520.5 27 473.0 28 469.5 29 466.0 30 505.5 31 545.0 32 590.0 33 635.0 34 687.5 35 740.0 36 844.0 37 948.0 38 1213.0 39 1478.0 40 2086.5 41 2695.0 42 3782.0 43 4869.0 44 5977.5 45 7086.0 46 9989.0 47 12892.0 48 15678.5 49 18465.0 50 17980.5 51 17496.0 52 14055.0 53 10614.0 54 7791.0 55 4968.0 56 3554.0 57 2140.0 58 1718.0 59 1296.0 60 1117.0 61 938.0 62 916.5 63 895.0 64 864.0 65 833.0 66 646.5 67 460.0 68 404.0 69 348.0 70 272.0 71 196.0 72 188.0 73 180.0 74 151.5 75 94.5 76 66.0 77 53.5 78 41.0 79 25.5 80 10.0 81 9.0 82 8.0 83 5.0 84 2.0 85 1.5 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 121743.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.191797475008826 #Duplication Level Percentage of deduplicated Percentage of total 1 77.17208084444808 38.734054524695466 2 11.350953277145896 11.394494960695893 3 4.603551264217331 6.931815381582513 4 2.1700351853367152 4.356718661442547 5 1.2633990671794453 3.1706135054992894 6 0.7675312985844039 2.311426529656736 7 0.5318713689550774 1.8686906023344256 8 0.3698551673349153 1.4850956523167658 9 0.25693478438752965 1.1606416796037555 >10 1.3648637591031831 12.172363092744552 >50 0.10146469192373782 3.421141256581487 >100 0.03764012764912855 2.940620815981206 >500 0.006546109156370183 2.160288476544853 >1k 0.0016365272890925457 0.8361877068907453 >5k 0.0016365272890925457 7.055847153429766 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8590 7.055847153429766 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCC 1018 0.8361877068907453 No Hit CCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 827 0.67929983654091 No Hit CTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGCT 715 0.5873027607336767 Illumina Single End Adapter 1 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 548 0.4501285494853914 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGC 540 0.4435573297848747 No Hit GCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTGC 477 0.391808974643306 No Hit TCCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTG 231 0.18974396885241862 No Hit GTGTTTGTGTGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGC 229 0.18810116392728946 No Hit TTCCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCT 185 0.15195945557444782 No Hit CGTTTTTTTCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCG 170 0.13963841863597906 No Hit GGCCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCT 156 0.1281387841600749 No Hit TGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTG 151 0.124031771847252 No Hit GCCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTG 149 0.12238896692212282 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 141 0.11581774722160616 No Hit CGCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTCTG 139 0.11417494229647701 No Hit GTTTCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTC 131 0.10760372259596034 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 129 0.10596091767083118 No Hit GTGCCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTC 127 0.10431811274570202 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTC 127 0.10431811274570202 No Hit GTTCCTGTCTCTTATACACATCTGACGCTGTAGGGTTCGTATGCCGTCTTC 127 0.10431811274570202 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 124 0.10185390535800826 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.214024625645828E-4 0.0 0.0 0.6513721528137142 0.0 2 8.214024625645828E-4 0.0 0.0 2.349211042934707 0.0 3 8.214024625645828E-4 0.0 0.0 3.3357154004747707 0.0 4 8.214024625645828E-4 0.0 0.0 4.638459706102199 0.0 5 8.214024625645828E-4 0.0 0.0 7.6538281461767825 0.0 6 8.214024625645828E-4 0.0 0.0 9.732797778927742 0.0 7 8.214024625645828E-4 0.0 0.0 11.6934854570694 0.0 8 8.214024625645828E-4 0.0 0.0 14.836992681304059 0.0 9 8.214024625645828E-4 0.0 0.0 16.298267662206452 0.0 10 8.214024625645828E-4 0.0 0.0 19.954330023081408 0.0 11 8.214024625645828E-4 0.0 0.0 27.697691037677732 0.0 12 8.214024625645828E-4 0.0 0.0 34.56297281979251 0.0 13 8.214024625645828E-4 0.0 0.0 36.78404507856715 0.0 14 8.214024625645828E-4 0.0 0.0 37.630089615008664 0.0 15 8.214024625645828E-4 0.0 0.0 38.87122873594375 0.0 16 8.214024625645828E-4 0.0 0.0 41.755172782008 0.0 17 8.214024625645828E-4 0.0 0.0 45.465447705412224 0.0 18 8.214024625645828E-4 0.0 0.0 48.663988894638706 0.0 19 8.214024625645828E-4 0.0 0.0 50.406183517738185 0.0 20 8.214024625645828E-4 0.0 0.0 51.92906368333292 0.0 21 8.214024625645828E-4 0.0 0.0 53.63511659807956 0.0 22 8.214024625645828E-4 0.0 0.0 55.08324913958092 0.0 23 8.214024625645828E-4 0.0 0.0 56.1412155113641 0.0 24 8.214024625645828E-4 0.0 0.0 56.70141199083315 0.0 25 8.214024625645828E-4 0.0 0.0 57.02668736600872 0.0 26 8.214024625645828E-4 0.0 0.0 57.28132212940374 0.0 27 8.214024625645828E-4 0.0 0.0 57.49160115982028 0.0 28 8.214024625645828E-4 0.0 0.0 57.70763000747476 0.0 29 8.214024625645828E-4 0.0 0.0 57.903123793565136 0.0 30 8.214024625645828E-4 0.0 0.0 58.07479690824113 0.0 31 8.214024625645828E-4 0.0 0.0 58.199650082550946 0.0 32 8.214024625645828E-4 0.0 0.0 58.335181488874106 0.0 33 8.214024625645828E-4 0.0 0.0 58.459213260721356 0.0 34 8.214024625645828E-4 0.0 0.0 58.60624430152041 0.0 35 8.214024625645828E-4 0.0 0.0 58.70563399949073 0.0 36 8.214024625645828E-4 0.0 0.0 58.810773514698994 0.0 37 8.214024625645828E-4 0.0 0.0 58.91427022498213 0.0 38 8.214024625645828E-4 0.0 0.0 59.02762376481605 0.0 39 8.214024625645828E-4 0.0 0.0 59.123727852936106 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGGGTG 35 1.1999873E-7 45.000004 5 TGTATGG 35 1.1999873E-7 45.000004 2 CGTTCGG 25 3.870213E-5 45.0 45 TTGTCCG 25 3.870213E-5 45.0 1 GCCTTTG 20 7.008425E-4 45.0 1 GGTTGAT 20 7.008425E-4 45.0 15 GCGATTC 25 3.870213E-5 45.0 9 GTGTATG 20 7.008425E-4 45.0 1 TGTCCGG 25 3.870213E-5 45.0 2 TCAGGGC 20 7.008425E-4 45.0 4 CCCGGGC 25 3.870213E-5 45.0 4 CGGGGAA 20 7.008425E-4 45.0 6 GTCCGGG 25 3.870213E-5 45.0 3 TACGGGA 25 3.870213E-5 45.0 4 CCATGTA 20 7.008425E-4 45.0 3 TAGCAGG 25 3.870213E-5 45.0 2 AGGGAGC 20 7.008425E-4 45.0 6 GCTACCT 20 7.008425E-4 45.0 13 TTCCTTG 25 3.870213E-5 45.0 1 GACATGG 20 7.008425E-4 45.0 2 >>END_MODULE