##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933672.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 424150 Sequences flagged as poor quality 0 Sequence length 51 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.2566709890369 33.0 31.0 34.0 30.0 34.0 2 32.427464340445596 34.0 31.0 34.0 30.0 34.0 3 32.54975362489685 34.0 31.0 34.0 31.0 34.0 4 36.04942355298833 37.0 35.0 37.0 35.0 37.0 5 36.07727219144171 37.0 35.0 37.0 35.0 37.0 6 36.05013792290463 37.0 35.0 37.0 35.0 37.0 7 36.1366026169987 37.0 35.0 37.0 35.0 37.0 8 36.014391135211596 37.0 35.0 37.0 35.0 37.0 9 37.84935989626312 39.0 38.0 39.0 35.0 39.0 10 37.08890251090416 39.0 37.0 39.0 33.0 39.0 11 37.08252976541318 39.0 37.0 39.0 33.0 39.0 12 37.19322645290581 39.0 37.0 39.0 34.0 39.0 13 37.23926676883178 39.0 37.0 39.0 34.0 39.0 14 38.45376399858541 40.0 38.0 41.0 34.0 41.0 15 38.48725922433101 40.0 38.0 41.0 34.0 41.0 16 38.530045974301544 40.0 38.0 41.0 34.0 41.0 17 38.477194388777555 40.0 38.0 41.0 34.0 41.0 18 38.18739832606389 39.0 38.0 41.0 34.0 41.0 19 37.891361546622655 39.0 37.0 41.0 34.0 41.0 20 37.51674171873158 39.0 35.0 41.0 34.0 41.0 21 37.39418366144053 39.0 35.0 41.0 33.0 41.0 22 37.40573146292585 39.0 35.0 41.0 33.0 41.0 23 37.326372745490985 39.0 35.0 40.0 33.0 41.0 24 37.2188376753507 39.0 35.0 41.0 33.0 41.0 25 37.13716373924319 39.0 35.0 40.0 33.0 41.0 26 37.07036190027113 39.0 35.0 40.0 33.0 41.0 27 36.98149239655782 39.0 35.0 40.0 33.0 41.0 28 36.8350182718378 38.0 35.0 40.0 32.0 41.0 29 36.6632842154898 38.0 35.0 40.0 32.0 41.0 30 36.48612519155959 38.0 35.0 40.0 31.0 41.0 31 36.15725333018979 38.0 35.0 40.0 30.0 41.0 32 35.67934457149593 38.0 35.0 40.0 27.0 41.0 33 35.16728751620889 39.0 35.0 40.0 23.0 41.0 34 34.71151479429447 39.0 35.0 41.0 18.0 41.0 35 34.3656088647884 39.0 34.0 41.0 16.0 41.0 36 34.21349051043263 38.0 34.0 41.0 15.0 41.0 37 34.108843569491924 38.0 34.0 41.0 15.0 41.0 38 34.05486738182247 38.0 34.0 41.0 14.0 41.0 39 33.984953436284336 38.0 34.0 41.0 12.0 41.0 40 33.85254273252387 38.0 33.0 40.0 12.0 41.0 41 33.70633266533066 38.0 33.0 40.0 10.0 41.0 42 33.624687021101025 38.0 33.0 40.0 10.0 41.0 43 33.52172344689379 38.0 33.0 40.0 10.0 41.0 44 33.30591771778852 38.0 33.0 40.0 10.0 41.0 45 33.275468584227276 38.0 33.0 40.0 10.0 41.0 46 33.09007426617942 38.0 33.0 40.0 10.0 41.0 47 32.95228810562301 38.0 32.0 40.0 10.0 41.0 48 32.88517977130732 37.0 32.0 40.0 10.0 41.0 49 32.88037015206884 37.0 32.0 40.0 10.0 41.0 50 32.783795826948015 37.0 32.0 40.0 10.0 41.0 51 31.81379700577626 36.0 30.0 40.0 8.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 6.0 12 1.0 13 5.0 14 21.0 15 19.0 16 39.0 17 67.0 18 154.0 19 286.0 20 550.0 21 901.0 22 1540.0 23 2787.0 24 5081.0 25 9015.0 26 13141.0 27 13253.0 28 11035.0 29 9389.0 30 8853.0 31 9338.0 32 11035.0 33 13773.0 34 20874.0 35 27386.0 36 35311.0 37 49276.0 38 87326.0 39 93663.0 40 23.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.845455617116585 4.752563951432276 41.43864198986208 30.963338441589062 2 34.96475303548273 4.662265707886361 44.727337026995166 15.64564422963574 3 18.65283508192856 4.704467759047507 59.859955204526706 16.78274195449723 4 14.635859955204527 4.865495697276907 60.19521395732642 20.303430390192148 5 13.514322763173405 5.605092538017211 61.454438288341386 19.426146410467997 6 17.5730284097607 6.641518330779206 62.85276435223388 12.932688907226217 7 70.76765295296475 1.9283272427207356 24.052339974065777 3.2516798302487326 8 71.952846870211 2.0761523046092187 22.463279500176824 3.5077213250029473 9 66.9194860308853 4.6837203819403515 24.104208416833668 4.292585170340681 10 29.16963338441589 20.83838264764824 33.33325474478369 16.658729223152186 11 20.92042909348108 22.400801603206414 36.94754214310974 19.731227160202756 12 17.07226217140163 20.447483201697516 43.473063774608036 19.007190852292823 13 18.897324059884475 20.473417423081457 45.30307674171873 15.326181775315337 14 18.612283390310033 21.626782977720147 44.187433690911234 15.57349994105859 15 15.92384769539078 21.896498880113167 45.102675940115525 17.076977484380524 16 16.644111752917603 20.836496522456677 43.07037604621007 19.449015678415655 17 17.01002004008016 21.05151479429447 41.4492514440646 20.489213721560766 18 18.23765177413651 19.44265000589414 43.140398443946715 19.179299776022635 19 17.85665448544147 22.85913002475539 42.09006247789697 17.194153011906167 20 19.04656371566663 23.03524696451727 40.791465283508195 17.126724036307913 21 18.27773193445715 24.57031710479783 40.89897441942709 16.252976541317928 22 17.23541200047153 22.4899210185076 40.1563126252505 20.118354355770364 23 16.629494282683012 23.763055522810326 38.93127431333255 20.676175881174114 24 16.429093481079807 23.7293410350112 39.82647648237651 20.015089001532477 25 16.317576329128848 25.81209477779088 37.91182364729459 19.95850524578569 26 15.69751267240363 26.67994813155723 38.73794648119769 18.884592714841446 27 16.07568077331133 25.386066250147355 39.8903689732406 18.647884003300717 28 15.40209831427561 24.113639042791466 40.203937286337386 20.280325356595544 29 16.649298597194388 23.331368619592123 38.762230343039015 21.257102440174467 30 19.131203583637866 24.14381704585642 37.188023105033594 19.53695626547212 31 18.162678297772015 26.700695508664385 34.94188376753507 20.19474242602853 32 16.723564776612047 26.497701284922787 34.71932099493104 22.059412943534127 33 19.50017682423671 24.258399151243665 32.57220322998939 23.669220794530236 34 18.48214075209242 25.414829659318638 32.59625132618177 23.506778262407167 35 17.953554167157844 26.778262407167276 31.271248379111167 23.996935046563717 36 18.805375456795943 27.6732288105623 31.008369680537545 22.51302605210421 37 17.790168572438997 26.461393374985263 33.36814806082754 22.380289991748203 38 18.77991276670989 25.622303430390193 32.50618884828481 23.091594954615115 39 22.045031238948486 24.033714487799127 30.51679830248733 23.40445597076506 40 21.91088058469881 24.753035482730166 30.550512790286454 22.78557114228457 41 18.33195803371449 25.700106094542026 32.28126841919132 23.68666745255216 42 18.06955086643876 26.00377225038312 35.12695980195685 20.799717081221267 43 18.445597076505955 24.266650948956737 35.875279971708125 21.41247200282919 44 19.847223859483673 24.49557939408228 31.991512436637983 23.665684309796063 45 21.660497465519274 23.671106919721797 30.164092891665682 24.504302723093247 46 21.54827301662148 24.40787457267476 31.783567134268537 22.260285276435223 47 18.316161735235177 26.028527643522338 34.66202994223742 20.993280679005068 48 18.147353530590593 25.125780973712132 35.59023930213368 21.136626193563597 49 20.86384533773429 23.245549923376164 34.59530826358599 21.295296475303548 50 20.196157019922197 22.407403041376874 32.85323588353177 24.543204055169163 51 19.314629258517037 22.085111399269127 31.59731227160203 27.00294707061181 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 526.0 1 1028.0 2 1530.0 3 10033.0 4 18536.0 5 12405.5 6 6275.0 7 6071.0 8 5867.0 9 5842.5 10 5818.0 11 5810.0 12 5802.0 13 5652.0 14 5502.0 15 5257.0 16 5012.0 17 4868.0 18 4724.0 19 4578.5 20 4433.0 21 4290.5 22 4148.0 23 4166.0 24 4184.0 25 4164.5 26 4292.0 27 4439.0 28 4788.0 29 5137.0 30 5607.0 31 6077.0 32 7209.5 33 8342.0 34 9434.0 35 10526.0 36 11741.0 37 12956.0 38 14372.0 39 15788.0 40 17140.0 41 18492.0 42 20738.0 43 22984.0 44 25031.0 45 27078.0 46 30938.5 47 34799.0 48 38318.5 49 41838.0 50 40179.0 51 38520.0 52 33357.5 53 28195.0 54 23804.0 55 19413.0 56 16565.0 57 13717.0 58 12381.5 59 11046.0 60 9698.0 61 8350.0 62 7174.0 63 5998.0 64 5339.5 65 4681.0 66 3926.0 67 3171.0 68 2559.0 69 1947.0 70 1692.0 71 1437.0 72 1246.0 73 1055.0 74 928.0 75 646.0 76 491.0 77 341.0 78 191.0 79 133.0 80 75.0 81 64.0 82 53.0 83 41.5 84 30.0 85 23.5 86 17.0 87 9.5 88 2.0 89 2.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 424150.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.80931644463817 #Duplication Level Percentage of deduplicated Percentage of total 1 75.11955804645484 36.665342798707805 2 9.811707301487512 9.578054530809418 3 4.62326761500673 6.769755960873332 4 2.738163395900251 5.345915346704817 5 1.773295683647551 4.3276675086532155 6 1.2822933660236113 3.755271760626401 7 0.9407993896930417 3.21438425857151 8 0.686824140572898 2.6818733455231385 9 0.5705397670629929 2.5062890431344997 >10 2.3721545561856923 18.017434056605317 >50 0.05571800515453844 1.853555965850214 >100 0.022771706454432276 1.785921747140327 >500 0.0019380175705899813 0.6380318953634272 >1k 4.845043926474953E-4 0.3845218168498638 >5k 0.0 0.0 >10k+ 4.845043926474953E-4 2.4759799645867617 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10470 2.4684663444536135 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACTCGCTTTCGTATGCC 1626 0.3833549451844866 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCACTCGCTTTCGTATGC 795 0.18743369091123424 No Hit CTGTCTCTTATACACATCTGACGCACTCGCTTTCGTATGCCGTCTTCTGCT 691 0.16291406342095957 TruSeq Adapter, Index 16 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCACTCGCTTTCGTATGCCGTCTTCTGC 660 0.15560532830366616 TruSeq Adapter, Index 13 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCACTCGCTTTCGTATGCCGTCTTCTGC 552 0.1301426382176117 TruSeq Adapter, Index 13 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3576564894494873E-4 0.0 0.0 0.1805964870918307 0.0 2 2.3576564894494873E-4 0.0 0.0 0.616291406342096 0.0 3 2.3576564894494873E-4 0.0 0.0 0.8786985736178239 0.0 4 2.3576564894494873E-4 0.0 0.0 1.3120358363786397 0.0 5 2.3576564894494873E-4 0.0 0.0 2.326063892490864 0.0 6 2.3576564894494873E-4 0.0 0.0 3.4325120829895086 0.0 7 2.3576564894494873E-4 0.0 0.0 4.339738300129671 0.0 8 2.3576564894494873E-4 0.0 0.0 5.649180714369916 0.0 9 2.3576564894494873E-4 0.0 0.0 6.314039844394672 0.0 10 2.3576564894494873E-4 0.0 0.0 7.763998585406107 0.0 11 2.3576564894494873E-4 0.0 0.0 11.010255805729106 0.0 12 2.3576564894494873E-4 0.0 0.0 13.780737946481198 0.0 13 2.3576564894494873E-4 0.0 0.0 14.774490156784157 0.0 14 2.3576564894494873E-4 0.0 0.0 15.131675114935755 0.0 15 2.3576564894494873E-4 0.0 0.0 15.575621831899092 0.0 16 2.3576564894494873E-4 0.0 0.0 16.724036307909937 2.3576564894494873E-4 17 2.3576564894494873E-4 0.0 0.0 18.30720264057527 2.3576564894494873E-4 18 2.3576564894494873E-4 0.0 0.0 19.854296828952023 2.3576564894494873E-4 19 2.3576564894494873E-4 0.0 0.0 20.78321348579512 2.3576564894494873E-4 20 2.3576564894494873E-4 0.0 0.0 21.605328303666155 2.3576564894494873E-4 21 2.3576564894494873E-4 0.0 0.0 22.58257691854297 2.3576564894494873E-4 22 2.3576564894494873E-4 0.0 0.0 23.417187315808086 2.3576564894494873E-4 23 2.3576564894494873E-4 0.0 0.0 24.078981492396558 2.3576564894494873E-4 24 2.3576564894494873E-4 0.0 0.0 24.500058941412235 2.3576564894494873E-4 25 2.3576564894494873E-4 0.0 0.0 24.819049864434753 2.3576564894494873E-4 26 2.3576564894494873E-4 0.0 0.0 25.070376046210068 2.3576564894494873E-4 27 2.3576564894494873E-4 0.0 0.0 25.302133679122953 2.3576564894494873E-4 28 2.3576564894494873E-4 0.0 0.0 25.527997170812213 2.3576564894494873E-4 29 2.3576564894494873E-4 0.0 0.0 25.77555110220441 2.3576564894494873E-4 30 2.3576564894494873E-4 0.0 0.0 26.010373688553578 2.3576564894494873E-4 31 2.3576564894494873E-4 0.0 0.0 26.241895555817518 2.3576564894494873E-4 32 2.3576564894494873E-4 0.0 0.0 26.515383708593657 2.3576564894494873E-4 33 2.3576564894494873E-4 0.0 0.0 26.72757279264411 2.3576564894494873E-4 34 2.3576564894494873E-4 0.0 0.0 26.931038547683603 2.3576564894494873E-4 35 2.3576564894494873E-4 0.0 0.0 27.137805021808322 2.3576564894494873E-4 36 2.3576564894494873E-4 0.0 0.0 27.343392667688317 2.3576564894494873E-4 37 2.3576564894494873E-4 0.0 0.0 27.597076505953083 2.3576564894494873E-4 38 2.3576564894494873E-4 0.0 0.0 27.841093952611104 2.3576564894494873E-4 39 2.3576564894494873E-4 0.0 0.0 28.088883649652246 2.3576564894494873E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACACG 20 7.028247E-4 45.000004 9 CTATCGG 20 7.028247E-4 45.000004 2 AGGCACG 20 7.028247E-4 45.000004 10 CGTTTTT 6995 0.0 43.713364 1 GCGATCT 150 0.0 42.0 9 CGTTTGG 205 0.0 40.609756 2 GCGCGAC 50 1.0786607E-9 40.5 9 GCCGATT 45 1.9233994E-8 40.0 9 TGCGGGA 370 0.0 39.527027 4 ACAAGCG 245 0.0 39.489796 14 TTACGGG 80 0.0 39.375004 3 GCGGGAT 155 0.0 39.193546 5 TGGGCGA 590 0.0 38.898304 6 GTTTTTT 8295 0.0 38.598553 2 CGGGTAC 35 6.2389718E-6 38.571426 6 CCGCTTG 35 6.2389718E-6 38.571426 1 CTACGGG 35 6.2389718E-6 38.571426 3 TTGGGAC 750 0.0 37.8 5 CGGGTGC 30 1.13870745E-4 37.500004 6 CGGGTAG 60 1.546141E-10 37.500004 6 >>END_MODULE