##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933670.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1054939 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.52657926192889 34.0 31.0 34.0 31.0 34.0 2 32.712783393163015 34.0 31.0 34.0 31.0 34.0 3 32.753701398848655 34.0 31.0 34.0 31.0 34.0 4 36.23021520675603 37.0 37.0 37.0 35.0 37.0 5 36.233426766855715 37.0 37.0 37.0 35.0 37.0 6 36.20841868581975 37.0 37.0 37.0 35.0 37.0 7 36.264315756645644 37.0 37.0 37.0 35.0 37.0 8 36.16822868431255 37.0 37.0 37.0 35.0 37.0 9 38.01650332388887 39.0 39.0 39.0 35.0 39.0 10 37.43774474163909 39.0 37.0 39.0 34.0 39.0 11 37.38657495836252 39.0 37.0 39.0 34.0 39.0 12 37.37207269804226 39.0 37.0 39.0 34.0 39.0 13 37.38223063134456 39.0 37.0 39.0 34.0 39.0 14 38.70370040353044 40.0 38.0 41.0 35.0 41.0 15 38.76779984435119 40.0 38.0 41.0 35.0 41.0 16 38.79662710355765 40.0 38.0 41.0 35.0 41.0 17 38.74210167602108 40.0 38.0 41.0 34.0 41.0 18 38.26535373135319 39.0 38.0 41.0 34.0 41.0 19 37.778882949630265 38.0 37.0 41.0 34.0 41.0 20 37.222751268082796 38.0 35.0 41.0 34.0 41.0 21 37.1318000377273 38.0 35.0 40.0 33.0 41.0 22 37.11490048239756 38.0 35.0 40.0 33.0 41.0 23 37.03958617512482 38.0 35.0 40.0 33.0 41.0 24 36.92926510442784 38.0 35.0 40.0 33.0 41.0 25 36.85165966942164 38.0 35.0 40.0 33.0 41.0 26 36.782887920533796 38.0 35.0 40.0 33.0 41.0 27 36.707518633778825 38.0 35.0 40.0 33.0 41.0 28 36.5253545465662 38.0 35.0 40.0 33.0 41.0 29 36.32784644420199 38.0 35.0 40.0 32.0 41.0 30 36.05939869509043 38.0 35.0 40.0 31.0 41.0 31 35.59866020689348 38.0 35.0 40.0 30.0 41.0 32 34.83110303060177 38.0 35.0 40.0 23.0 41.0 33 33.90935305264096 38.0 34.0 40.0 16.0 41.0 34 33.07669922147157 38.0 33.0 40.0 12.0 41.0 35 32.51664409032181 37.0 32.0 40.0 9.0 41.0 36 32.21826664859295 37.0 31.0 40.0 8.0 41.0 37 32.008640310008445 37.0 31.0 40.0 7.0 41.0 38 31.890780414791756 37.0 30.0 40.0 7.0 41.0 39 31.800400781466987 37.0 30.0 40.0 7.0 41.0 40 31.66269518901093 37.0 29.0 40.0 7.0 41.0 41 31.48854957490433 37.0 29.0 40.0 7.0 41.0 42 31.32346135653341 36.0 27.0 40.0 7.0 41.0 43 31.180241701178932 36.0 27.0 40.0 7.0 41.0 44 30.965299415416435 36.0 25.0 40.0 7.0 41.0 45 30.96028585539069 36.0 25.0 40.0 7.0 41.0 46 30.83570803619925 35.0 24.0 40.0 7.0 41.0 47 30.751138217470395 35.0 24.0 40.0 7.0 41.0 48 30.66652858601303 35.0 24.0 40.0 7.0 41.0 49 30.65014754407601 35.0 24.0 40.0 7.0 41.0 50 30.556232161290843 35.0 24.0 40.0 7.0 41.0 51 29.689626604002697 35.0 23.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 6.0 11 11.0 12 11.0 13 16.0 14 25.0 15 60.0 16 93.0 17 216.0 18 439.0 19 909.0 20 1581.0 21 2501.0 22 4110.0 23 7285.0 24 14847.0 25 30255.0 26 49483.0 27 52196.0 28 42119.0 29 32581.0 30 27005.0 31 26241.0 32 28197.0 33 35076.0 34 54198.0 35 65061.0 36 80200.0 37 103920.0 38 179717.0 39 216497.0 40 78.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.354447034378293 3.621915579952964 37.66577972754823 38.357857658120516 2 43.156049781077385 3.767706000062563 39.9560543311035 13.120189887756542 3 16.70115523267222 3.7717820651241447 65.18594914018725 14.341113562016384 4 13.799376077668946 4.092464114038822 64.9822406793189 17.125919128973337 5 12.980371376923216 4.8285256303918995 64.655207552285 17.53589544039987 6 16.010973146314623 5.6093290702116425 66.29407008367309 12.085627699800652 7 63.515236425992406 1.842097031202752 31.78420742810722 2.8584591146976273 8 65.22936397270364 2.0346200112044395 30.26023305612931 2.475782959962614 9 60.93025283926369 3.7779435588218844 31.676428684502138 3.6153749174122862 10 29.52445591640844 17.531534998706086 39.36170716979844 13.582301915087033 11 22.046393203777658 19.50690987820149 42.678960584450856 15.767736333569998 12 17.412760358655806 17.857620203632628 48.153495130998095 16.576124306713467 13 17.545469453684053 17.49722021842021 49.6912143735325 15.266095954363237 14 16.53195113651121 18.308451957885715 49.92336049762119 15.236236407981885 15 15.81494285451576 18.230153591819054 50.03360383870537 15.921299714959822 16 17.168006870539436 17.4793044905914 49.133077836728 16.219610802141165 17 17.35455794126485 17.940752972446745 47.81385463993652 16.890834446351874 18 18.23024838402979 17.405082189586317 47.98940981421674 16.37525961216715 19 18.470262261609438 19.847498291370403 45.64197550758859 16.04026393943157 20 19.292774274152343 20.100688286242143 45.40499498075244 15.201542458853071 21 19.608811504741034 19.9875063866252 45.09189630869652 15.311785799937248 22 18.64164657861734 18.323618711603228 45.66681106680102 17.367923642978408 23 17.589547831675574 19.893188136944413 45.2832817821694 17.233982249210616 24 17.109235699884067 19.883519331449495 46.02313498695185 16.98410998171458 25 17.284790874164287 20.908507506121207 44.69793988088411 17.108761738830395 26 16.653569542883524 20.690675005853418 45.059382580414606 17.596372870848455 27 16.990650644255258 19.85233269411786 45.658943313310054 17.498073348316822 28 16.761822247542273 20.14969585919186 45.364423914558095 17.724057978707776 29 17.707469341829242 19.950253047806555 44.60807686510784 17.734200745256363 30 18.60145468126593 20.38629721718507 44.06842480939656 16.943823292152437 31 18.9636557184823 21.218857204065827 42.548810879112445 17.26867619833943 32 18.83966750684163 21.39858323561836 41.658238059262196 18.103511198277815 33 20.575976430864724 21.80647411840874 38.94784437773179 18.66970507299474 34 19.47676595518793 23.098112781876488 38.05006734986573 19.375053913069856 35 20.293780019508237 24.486344708082648 36.094693626835294 19.125181645573818 36 21.5813426179144 25.755138448763386 33.757686463387934 18.905832469934282 37 21.041974938835324 26.107291511641904 34.42919448423084 18.421539065291928 38 21.233644788940403 25.393316580389957 34.57176196917547 18.80127666149417 39 21.285780504844357 25.230937523401824 33.42126890749134 20.062013064262484 40 21.74457480479914 25.01500086734873 33.78138451607155 19.45903981178059 41 20.478435246018964 25.93249467504756 33.679482889532004 19.909587189401474 42 20.762622293800874 26.567128525914768 33.31017243651055 19.36007674377381 43 20.200125315302593 25.448296062615945 34.46057070598395 19.891007916097518 44 20.8069850484246 25.249611588916515 33.57170414592692 20.37169921673196 45 20.960453637603692 24.705599091511452 33.129498482850664 21.20444878803419 46 20.746318033554548 25.05244379058884 33.39558021838229 20.80565795747432 47 19.93821443704328 25.85400672455943 34.12984068273141 20.077938155665873 48 20.00494815340034 25.226387497286574 34.51697207137095 20.251692277942137 49 20.69408752543986 24.534119982292815 34.09998113635007 20.67181135591726 50 20.02068366038226 24.401979640528978 34.047181874970974 21.53015482411779 51 19.674502506780012 24.24178080438774 33.73683217702635 22.346884511805897 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 641.0 1 1877.0 2 3113.0 3 36769.5 4 70426.0 5 46820.5 6 23215.0 7 22959.0 8 22703.0 9 22756.5 10 22810.0 11 22664.5 12 22519.0 13 21670.0 14 20821.0 15 20020.0 16 19219.0 17 18232.0 18 17245.0 19 16494.5 20 15744.0 21 14911.0 22 14078.0 23 13733.0 24 13388.0 25 13152.0 26 13029.5 27 13143.0 28 13719.5 29 14296.0 30 15084.5 31 15873.0 32 18055.0 33 20237.0 34 22401.0 35 24565.0 36 26497.0 37 28429.0 38 30663.5 39 32898.0 40 34130.0 41 35362.0 42 38565.0 43 41768.0 44 45998.0 45 50228.0 46 54598.0 47 58968.0 48 63390.5 49 67813.0 50 67880.0 51 67947.0 52 63194.0 53 58441.0 54 53558.5 55 48676.0 56 45303.5 57 41931.0 58 39245.0 59 36559.0 60 34235.5 61 31912.0 62 28350.0 63 24788.0 64 21550.0 65 18312.0 66 16068.5 67 13825.0 68 11793.0 69 9761.0 70 8458.0 71 7155.0 72 6276.0 73 5397.0 74 4416.0 75 2901.0 76 2367.0 77 1715.0 78 1063.0 79 810.0 80 557.0 81 379.0 82 201.0 83 156.0 84 111.0 85 78.0 86 45.0 87 29.5 88 14.0 89 16.5 90 19.0 91 11.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1054939.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.80095488706823 #Duplication Level Percentage of deduplicated Percentage of total 1 76.31074169534328 31.89861871005761 2 7.786619766484638 6.509762831631563 3 3.656248031171471 4.5850397702079215 4 2.386943231166528 3.991060252959397 5 1.6364485211625937 3.4202555404063557 6 1.297948489800194 3.2553291760725753 7 0.998299608809591 2.921091383813931 8 0.8636796577539738 2.888210752852191 9 0.7271920716884007 2.735759068459248 >10 4.228932510996227 28.507919541879062 >50 0.07016451139327604 2.044765406676523 >100 0.0338302700167068 2.3249750480483 >500 0.002270487856241859 0.6349382694131908 >1k 4.540975712483717E-4 0.20016215398989826 >5k 0.0 0.0 >10k+ 2.2704878562418586E-4 4.082112093532249 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 43011 4.077107775899838 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1081 0.10247037980395075 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8958442146891906E-4 0.0 0.0 0.05374718348643855 0.0 2 1.8958442146891906E-4 0.0 0.0 0.1695832650039481 0.0 3 1.8958442146891906E-4 0.0 0.0 0.2915808402191975 0.0 4 1.8958442146891906E-4 0.0 0.0 0.4433431696050672 0.0 5 1.8958442146891906E-4 0.0 0.0 0.8200474150638094 0.0 6 1.8958442146891906E-4 0.0 0.0 1.528145229250222 0.0 7 1.8958442146891906E-4 0.0 0.0 2.1235351048733624 0.0 8 1.8958442146891906E-4 0.0 0.0 2.937231441817963 0.0 9 1.8958442146891906E-4 0.0 0.0 3.580396591651271 0.0 10 1.8958442146891906E-4 0.0 0.0 4.357977096306042 0.0 11 1.8958442146891906E-4 0.0 0.0 5.4313092984523275 0.0 12 1.8958442146891906E-4 0.0 0.0 6.271357869981108 0.0 13 1.8958442146891906E-4 0.0 0.0 6.638488102155669 0.0 14 1.8958442146891906E-4 0.0 0.0 6.841153848705944 0.0 15 1.8958442146891906E-4 0.0 0.0 7.009504814970344 0.0 16 1.8958442146891906E-4 0.0 0.0 7.292838732855643 0.0 17 1.8958442146891906E-4 0.0 0.0 7.646413678895178 0.0 18 1.8958442146891906E-4 0.0 0.0 8.010605352536972 0.0 19 2.843766322033786E-4 0.0 0.0 8.253462996438657 0.0 20 2.843766322033786E-4 0.0 0.0 8.495941471497405 0.0 21 2.843766322033786E-4 0.0 0.0 8.77453577884598 0.0 22 2.843766322033786E-4 0.0 0.0 9.048200891236366 0.0 23 2.843766322033786E-4 0.0 0.0 9.293238755984943 0.0 24 2.843766322033786E-4 0.0 0.0 9.490785723155557 0.0 25 2.843766322033786E-4 0.0 0.0 9.656103338676454 0.0 26 2.843766322033786E-4 0.0 0.0 9.816776135871363 0.0 27 2.843766322033786E-4 0.0 0.0 9.98143020591712 0.0 28 2.843766322033786E-4 0.0 0.0 10.147980120177564 0.0 29 2.843766322033786E-4 0.0 0.0 10.324198839932926 0.0 30 2.843766322033786E-4 0.0 0.0 10.525347911111448 0.0 31 2.843766322033786E-4 0.0 0.0 10.714079202683758 0.0 32 2.843766322033786E-4 0.0 0.0 10.92309602735324 0.0 33 3.791688429378381E-4 0.0 0.0 11.12225446210634 0.0 34 3.791688429378381E-4 0.0 0.0 11.32416187097074 0.0 35 3.791688429378381E-4 0.0 0.0 11.532135981322142 0.0 36 3.791688429378381E-4 0.0 0.0 11.732242338182587 0.0 37 3.791688429378381E-4 0.0 0.0 11.943534175909697 0.0 38 4.7396105367229763E-4 0.0 0.0 12.18421159896449 0.0 39 4.7396105367229763E-4 0.0 0.0 12.514657245584816 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGA 35 1.2117926E-7 45.0 22 CGCTATC 30 2.1653323E-6 44.999996 26 CGTTTTT 27615 0.0 44.29115 1 TACGGGT 80 0.0 42.187504 4 GTTTTTT 31070 0.0 40.30737 2 GATAACG 40 3.4578625E-7 39.375004 17 CGATAAC 40 3.4578625E-7 39.375004 16 GCTACGA 110 0.0 38.863636 10 CCGATAA 35 6.247803E-6 38.571426 15 CCGCTAT 35 6.247803E-6 38.571426 25 TACCGGT 35 6.247803E-6 38.571426 40 TGGGCGA 1595 0.0 37.805645 6 CGTGCAA 30 1.13985836E-4 37.499996 14 TCGTTTG 290 0.0 37.241383 1 TACGAAT 115 0.0 37.173912 12 TTGGGAC 1580 0.0 36.455696 5 TTTGGGC 2895 0.0 36.139896 4 CTCGTAA 75 1.8189894E-12 36.000004 33 CGAATAT 125 0.0 36.0 14 TTACGTA 25 0.0021070302 36.0 20 >>END_MODULE