##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933669.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1067579 Sequences flagged as poor quality 0 Sequence length 51 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.40843066414757 34.0 31.0 34.0 31.0 34.0 2 32.63441394032667 34.0 31.0 34.0 31.0 34.0 3 32.690982119356036 34.0 31.0 34.0 31.0 34.0 4 36.14848268840058 37.0 35.0 37.0 35.0 37.0 5 36.20372356518815 37.0 35.0 37.0 35.0 37.0 6 36.19696247303478 37.0 37.0 37.0 35.0 37.0 7 36.19175723763768 37.0 37.0 37.0 35.0 37.0 8 36.126696010318675 37.0 37.0 37.0 35.0 37.0 9 37.98463626579391 39.0 39.0 39.0 35.0 39.0 10 37.44868997985161 39.0 37.0 39.0 34.0 39.0 11 37.39712283587444 39.0 37.0 39.0 34.0 39.0 12 37.35915843230337 39.0 37.0 39.0 34.0 39.0 13 37.37960001086571 39.0 37.0 39.0 34.0 39.0 14 38.730113649669015 40.0 38.0 41.0 35.0 41.0 15 38.781411961082036 40.0 38.0 41.0 35.0 41.0 16 38.85341412672973 40.0 38.0 41.0 35.0 41.0 17 38.82280936586426 40.0 38.0 41.0 35.0 41.0 18 38.382159072068674 39.0 38.0 41.0 35.0 41.0 19 37.92117023658202 39.0 37.0 41.0 35.0 41.0 20 37.31766080074636 38.0 35.0 41.0 34.0 41.0 21 37.266577930064194 38.0 35.0 41.0 34.0 41.0 22 37.22451827920931 38.0 35.0 41.0 34.0 41.0 23 37.0978681671333 38.0 35.0 41.0 33.0 41.0 24 36.99389178693099 38.0 35.0 41.0 33.0 41.0 25 36.930131634286546 38.0 35.0 40.0 33.0 41.0 26 36.89073595490357 38.0 35.0 40.0 33.0 41.0 27 36.820114483330975 38.0 35.0 40.0 33.0 41.0 28 36.70417926916884 38.0 35.0 40.0 33.0 41.0 29 36.45630534133774 38.0 35.0 40.0 33.0 41.0 30 36.10724733251591 38.0 35.0 40.0 31.0 41.0 31 35.63507899649581 38.0 35.0 40.0 30.0 41.0 32 34.95199231157601 38.0 35.0 40.0 23.0 41.0 33 33.97351484058791 38.0 34.0 40.0 16.0 41.0 34 33.161555257269015 38.0 33.0 40.0 12.0 41.0 35 32.64712025995266 38.0 32.0 40.0 10.0 41.0 36 32.331958571684154 37.0 31.0 40.0 8.0 41.0 37 32.144234759207514 37.0 31.0 40.0 8.0 41.0 38 32.010702720829094 37.0 30.0 40.0 7.0 41.0 39 31.950221014088886 37.0 30.0 40.0 7.0 41.0 40 31.80611645601871 37.0 30.0 40.0 7.0 41.0 41 31.647777822531165 37.0 29.0 40.0 7.0 41.0 42 31.43793293049039 36.0 28.0 40.0 7.0 41.0 43 31.313230215281493 36.0 27.0 40.0 7.0 41.0 44 31.108928706915368 36.0 26.0 40.0 7.0 41.0 45 31.080682553703287 36.0 26.0 40.0 7.0 41.0 46 30.94161462524085 35.0 25.0 40.0 7.0 41.0 47 30.916746208008963 35.0 25.0 40.0 7.0 41.0 48 30.797937201837055 35.0 24.0 40.0 7.0 41.0 49 30.774363302387926 35.0 25.0 40.0 7.0 41.0 50 30.621112816943757 35.0 24.0 40.0 7.0 41.0 51 29.857089732937798 35.0 23.0 39.0 7.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 1.0 8 2.0 9 5.0 10 9.0 11 11.0 12 22.0 13 20.0 14 38.0 15 50.0 16 117.0 17 200.0 18 458.0 19 918.0 20 1511.0 21 2501.0 22 4155.0 23 7149.0 24 14715.0 25 30696.0 26 49480.0 27 52375.0 28 42381.0 29 32311.0 30 26927.0 31 26131.0 32 27843.0 33 34530.0 34 53581.0 35 65252.0 36 79331.0 37 101911.0 38 177818.0 39 235014.0 40 115.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.41113585036798 3.8972291511916217 37.55750159941325 38.13413339902714 2 43.20401581522304 3.8347513392451518 39.8000522677947 13.161180577737106 3 16.848589191057524 3.8462727348514725 64.93889445183916 14.366243622251842 4 13.947164565807308 4.125221646360598 64.74321806629767 17.184395721534425 5 13.016273268769805 4.921509321558404 64.56861740442628 17.49360000524551 6 16.012304475828017 5.588719898012232 66.21505293753437 12.183922688625385 7 63.48251511129387 1.894379713351424 31.719713482561946 2.9033916927927583 8 65.27441997266713 2.0523071360526948 30.165542784187398 2.507730107092777 9 60.93890943902044 3.850300539819536 31.597005935860484 3.613784085299542 10 29.547883575829047 17.622115084691625 39.23915700852115 13.590844330958177 11 22.07134085627387 19.518742875234526 42.60471590392842 15.805200364563184 12 17.429904484820327 17.84636078454147 48.05414868595205 16.669586044686156 13 17.53856154907506 17.567411873032345 49.634734291326446 15.259292286566145 14 16.60223739882482 18.38393224295345 49.75847220674067 15.25535815148106 15 15.810445878009965 18.26534617110303 50.01522135598396 15.908986594903046 16 17.164444036460065 17.478612823969 49.087046485552825 16.26989665401811 17 17.474022999703067 18.005693255487415 47.65427195551805 16.86601178929147 18 18.323140488900588 17.35000407463991 47.88188977115511 16.444965665304395 19 18.476571757218903 19.93304476764717 45.60055977122068 15.989823703913247 20 19.45504735480934 20.058187731306067 45.249204040169396 15.2375608737152 21 19.681166452318752 19.995428909710665 44.953300879841215 15.370103758129375 22 18.73397659564304 18.31199377282618 45.59006874432712 17.363960887203664 23 17.753159250978147 19.811273919775495 45.21145507732917 17.22411175191719 24 17.259518967682954 19.87646815832833 45.978705088803736 16.885307785184985 25 17.364991255916422 20.936342884226836 44.602694507853755 17.09597135200299 26 16.740400476217683 20.755185330546965 44.90440520092658 17.600008992308766 27 17.050916138290468 19.86438474342414 45.52815295167852 17.556546166606875 28 16.88390273694031 20.207403854890362 45.20077671066966 17.70791669749967 29 17.698081359786958 20.056220663763526 44.46218968338643 17.78350829306309 30 18.669157036622114 20.371419819985217 43.97716702932523 16.982256114067436 31 18.981358756588506 21.297533952990833 42.519944659833136 17.201162630587525 32 18.922534070078186 21.409656802915755 41.54914999264692 18.118659134359145 33 20.635568889983784 21.93364612829589 38.78232898923639 18.648455992483928 34 19.565577816723632 23.176739145299784 37.91653826086875 19.34114477710783 35 20.35502759046403 24.529238585622235 36.10018556003818 19.015548263875555 36 21.56964496304255 25.80755147862594 33.72696540490212 18.895838153429395 37 21.044906278598585 26.310558750218956 34.39576836936658 18.248766601815884 38 21.35017642722459 25.454790699329976 34.4975875321639 18.697445341281536 39 21.250792681384702 25.323933872809413 33.45354301648871 19.971730429317176 40 21.77525035617973 25.077488410693725 33.78925587708263 19.358005356043908 41 20.55342040261189 25.882768394657447 33.69717838211505 19.866632820615617 42 20.804924038408398 26.540892992462382 33.32736968411705 19.32681328501216 43 20.286180226475043 25.485889100478747 34.46667647078108 19.761254202265125 44 20.940464359077875 25.159543228182645 33.64612829589192 20.25386411684756 45 20.942337756737437 24.807344468184557 33.2055051663624 21.044812608715606 46 20.77120288053624 25.079455478236273 33.49204133839276 20.657300302834734 47 20.04235752108275 25.950117040518784 34.07110855496408 19.936416883434386 48 19.933794126710996 25.325807270468975 34.49646349356816 20.24393510925187 49 20.683153190536718 24.648667686419458 33.97135012959228 20.69682899345154 50 20.091346869880354 24.43144722779298 34.07045286578324 21.40675303654343 51 19.758069426243864 24.202799043443154 33.760405553125345 22.278725977187637 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 644.0 1 1873.0 2 3102.0 3 36721.0 4 70340.0 5 47241.0 6 24142.0 7 23681.5 8 23221.0 9 23331.0 10 23441.0 11 23141.0 12 22841.0 13 21986.0 14 21131.0 15 20237.0 16 19343.0 17 18306.0 18 17269.0 19 16481.5 20 15694.0 21 14862.0 22 14030.0 23 13673.5 24 13317.0 25 13117.0 26 13172.0 27 13427.0 28 13900.5 29 14374.0 30 15316.5 31 16259.0 32 18236.0 33 20213.0 34 22588.5 35 24964.0 36 26663.0 37 28362.0 38 30895.5 39 33429.0 40 34900.5 41 36372.0 42 39208.0 43 42044.0 44 46447.5 45 50851.0 46 55282.5 47 59714.0 48 63973.0 49 68232.0 50 68422.0 51 68612.0 52 63968.0 53 59324.0 54 54312.0 55 49300.0 56 45915.5 57 42531.0 58 39861.5 59 37192.0 60 34736.0 61 32280.0 62 28809.0 63 25338.0 64 21956.5 65 18575.0 66 16331.0 67 14087.0 68 11987.0 69 9887.0 70 8596.5 71 7306.0 72 6439.5 73 5573.0 74 4570.5 75 2999.5 76 2431.0 77 1730.5 78 1030.0 79 778.5 80 527.0 81 355.0 82 183.0 83 135.5 84 88.0 85 70.0 86 52.0 87 28.0 88 4.0 89 7.0 90 10.0 91 7.5 92 5.0 93 3.0 94 1.0 95 1.5 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1067579.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.82676413735149 #Duplication Level Percentage of deduplicated Percentage of total 1 76.26972707248993 31.901158850812084 2 7.773418148898198 6.502738549099448 3 3.789547728516392 4.755135570836737 4 2.2609288103078757 3.78269344320361 5 1.6863477630919566 3.5267235070198777 6 1.2709580095626103 3.189603653667181 7 1.000842796700436 2.930341091730946 8 0.8910805697868754 2.9816813455881936 9 0.7178194798158342 2.7021659467907915 >10 4.23476750837956 28.616309200033708 >50 0.06843071305909536 1.9980449243043379 >100 0.03319572329238845 2.26830606257148 >500 0.0024840336221656897 0.7124643854354797 >1k 2.2582123837869907E-4 0.10673269992603635 >5k 0.0 0.0 >10k+ 2.2582123837869907E-4 4.0259007689800415 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 42623 3.9924914221804664 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1130 0.10584696776538317 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.810096489346456E-4 0.0 0.0 0.04795898008484618 0.0 2 2.810096489346456E-4 0.0 0.0 0.1602691697757262 0.0 3 2.810096489346456E-4 0.0 0.0 0.27838689221125557 0.0 4 2.810096489346456E-4 0.0 0.0 0.4258232880189663 0.0 5 2.810096489346456E-4 0.0 0.0 0.7994724512190667 0.0 6 2.810096489346456E-4 0.0 0.0 1.5098648437258508 0.0 7 2.810096489346456E-4 0.0 0.0 2.080689110595094 0.0 8 2.810096489346456E-4 0.0 0.0 2.8853134053779628 0.0 9 2.810096489346456E-4 0.0 0.0 3.5239546675234337 0.0 10 2.810096489346456E-4 0.0 0.0 4.264321422583246 0.0 11 2.810096489346456E-4 0.0 0.0 5.310707685332889 0.0 12 2.810096489346456E-4 0.0 0.0 6.130881180690141 0.0 13 2.810096489346456E-4 0.0 0.0 6.500689878688134 0.0 14 2.810096489346456E-4 0.0 0.0 6.695991584697714 0.0 15 2.810096489346456E-4 0.0 0.0 6.855230385760679 0.0 16 3.7467953191286076E-4 0.0 0.0 7.136052694929369 0.0 17 3.7467953191286076E-4 0.0 0.0 7.485535028321089 0.0 18 3.7467953191286076E-4 0.0 0.0 7.837827458202156 0.0 19 3.7467953191286076E-4 0.0 0.0 8.083898240785928 0.0 20 3.7467953191286076E-4 0.0 0.0 8.308893299699601 0.0 21 3.7467953191286076E-4 0.0 0.0 8.580348620570469 0.0 22 3.7467953191286076E-4 0.0 0.0 8.858173493483855 0.0 23 3.7467953191286076E-4 0.0 0.0 9.104712625482517 0.0 24 3.7467953191286076E-4 0.0 0.0 9.299358642311248 0.0 25 3.7467953191286076E-4 0.0 0.0 9.450822843087023 0.0 26 3.7467953191286076E-4 0.0 0.0 9.603317412575556 0.0 27 5.620192978692912E-4 0.0 0.0 9.763305572702349 0.0 28 5.620192978692912E-4 0.0 0.0 9.935096138084395 0.0 29 5.620192978692912E-4 0.0 0.0 10.10388926721114 0.0 30 5.620192978692912E-4 0.0 0.0 10.295631517667545 0.0 31 6.556891808475063E-4 0.0 0.0 10.465174005858115 0.0 32 6.556891808475063E-4 0.0 0.0 10.671435088176144 0.0 33 6.556891808475063E-4 0.0 0.0 10.853529340685794 0.0 34 6.556891808475063E-4 0.0 0.0 11.047144988801765 0.0 35 6.556891808475063E-4 0.0 0.0 11.241228986332628 0.0 36 6.556891808475063E-4 0.0 0.0 11.434563624799663 0.0 37 6.556891808475063E-4 0.0 0.0 11.64513352173469 0.0 38 6.556891808475063E-4 0.0 0.0 11.88605246075466 0.0 39 6.556891808475063E-4 0.0 0.0 12.218674215210303 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGACG 20 7.0330594E-4 45.000004 24 TATTACG 20 7.0330594E-4 45.000004 1 CAGTACG 20 7.0330594E-4 45.000004 21 CGTTTTT 27270 0.0 44.257427 1 CGAATAT 175 0.0 39.857143 14 GTTTTTT 31200 0.0 39.728363 2 CGTTCAT 40 3.457917E-7 39.375004 17 TACGAAT 180 0.0 38.750004 12 ACCGGAA 35 6.247872E-6 38.571426 28 GGTATCA 65 9.094947E-12 38.07692 8 TACCGGG 95 0.0 37.894737 3 TGGGCGA 1815 0.0 37.809917 6 CTACGAA 185 0.0 37.7027 11 ACGGTAT 30 1.1398674E-4 37.500004 40 GCGATCT 330 0.0 36.81818 9 GCTACGA 190 0.0 36.710526 10 TTGGGAC 1540 0.0 36.23377 5 ACCCGCT 75 1.8189894E-12 36.0 34 ACGACGG 25 0.0021070412 36.0 25 TTGGGCG 1540 0.0 35.94156 5 >>END_MODULE