SRR2933668.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933668.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	79457
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6683	8.410838566771965	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCC	380	0.47824609537233975	No Hit
CCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC	338	0.4253873164101338	No Hit
CTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGCT	295	0.3712699950916848	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	253	0.31841121612947887	No Hit
TCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC	232	0.29198182664837585	No Hit
GCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC	208	0.26177681009854387	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGC	194	0.24415721711114188	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	142	0.1787130145865059	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	105	0.13214694740551494	No Hit
CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	95	0.11956152384308494	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTATGGG	35	1.1929478E-7	45.0	3
TGATGGG	20	6.993666E-4	45.0	3
CTGGGTT	20	6.993666E-4	45.0	5
ACTTTTG	20	6.993666E-4	45.0	1
GCTCTTG	20	6.993666E-4	45.0	1
CCGGGAC	20	6.993666E-4	45.0	5
TTTATGG	35	1.1929478E-7	45.0	2
TATGGGC	20	6.993666E-4	45.0	4
ATGGGGC	25	3.858003E-5	44.999996	5
CTTTGCG	25	3.858003E-5	44.999996	1
AGCTGGG	25	3.858003E-5	44.999996	3
CGTTTTT	2235	0.0	44.395973	1
TTTGTTG	60	3.6379788E-12	41.250004	1
TTGTTGG	55	5.820766E-11	40.909092	2
GTTTTTT	2550	0.0	40.5	2
TGTCTTG	45	1.8897481E-8	40.000004	1
CTTGGGC	90	0.0	40.000004	4
TTGGGAC	85	0.0	39.705883	5
TATTGGG	40	3.4043478E-7	39.375	3
TTGGGCT	190	0.0	39.07895	5