##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2933668.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 79457 Sequences flagged as poor quality 0 Sequence length 51 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05323634166908 33.0 31.0 34.0 30.0 34.0 2 32.25227481530891 34.0 31.0 34.0 30.0 34.0 3 32.30246548447588 33.0 31.0 34.0 30.0 34.0 4 35.93202612733931 37.0 35.0 37.0 35.0 37.0 5 35.953534616207506 37.0 35.0 37.0 35.0 37.0 6 35.935373850006926 37.0 35.0 37.0 35.0 37.0 7 35.938545376744656 37.0 35.0 37.0 35.0 37.0 8 35.7350264923166 37.0 35.0 37.0 35.0 37.0 9 37.57517902765017 39.0 37.0 39.0 35.0 39.0 10 37.18836603445889 39.0 37.0 39.0 33.0 39.0 11 37.20773500132147 39.0 37.0 39.0 34.0 39.0 12 37.268522597128005 39.0 37.0 39.0 34.0 39.0 13 37.21353688158375 39.0 37.0 39.0 34.0 39.0 14 38.4154825880665 40.0 38.0 41.0 34.0 41.0 15 38.43032080244661 40.0 38.0 41.0 34.0 41.0 16 38.484186415293806 40.0 38.0 41.0 34.0 41.0 17 38.45265992926992 40.0 38.0 41.0 34.0 41.0 18 38.00244157217111 39.0 38.0 40.0 34.0 41.0 19 37.46028669594875 38.0 37.0 40.0 34.0 41.0 20 36.808135217790756 37.0 35.0 40.0 33.0 41.0 21 36.685515436022 37.0 35.0 40.0 33.0 41.0 22 36.719621933876184 37.0 35.0 40.0 33.0 41.0 23 36.68830940005286 37.0 35.0 40.0 33.0 41.0 24 36.55165687101199 37.0 35.0 40.0 33.0 41.0 25 36.41847791887436 37.0 35.0 40.0 33.0 41.0 26 36.35114590281536 37.0 35.0 40.0 33.0 41.0 27 36.275230627886785 37.0 35.0 40.0 32.0 41.0 28 36.120580943151644 37.0 35.0 40.0 32.0 41.0 29 36.00845740463395 37.0 35.0 40.0 31.0 41.0 30 35.77996903985804 37.0 35.0 40.0 31.0 41.0 31 35.25343267427665 37.0 35.0 40.0 29.0 41.0 32 34.633902613992475 37.0 35.0 40.0 23.0 41.0 33 33.94347886278113 37.0 33.0 40.0 18.0 41.0 34 33.29444856966661 37.0 33.0 40.0 15.0 41.0 35 32.84462036069824 36.0 33.0 40.0 12.0 41.0 36 32.54413078772166 36.0 32.0 40.0 10.0 41.0 37 32.18964974766226 36.0 31.0 40.0 10.0 41.0 38 31.89522634884277 35.0 30.0 40.0 10.0 41.0 39 31.851189951797828 35.0 30.0 40.0 10.0 41.0 40 31.67106736977233 35.0 30.0 40.0 10.0 41.0 41 31.571441156852135 35.0 30.0 40.0 8.0 41.0 42 31.344135821891086 35.0 28.0 40.0 8.0 41.0 43 30.94174207432951 35.0 27.0 39.0 8.0 41.0 44 30.66107454346376 35.0 26.0 39.0 8.0 41.0 45 30.832274060183494 35.0 26.0 39.0 8.0 41.0 46 30.729627345608318 35.0 26.0 39.0 7.0 41.0 47 30.510338925456537 35.0 26.0 39.0 7.0 41.0 48 30.425274047598073 35.0 25.0 39.0 7.0 41.0 49 30.427690448922057 35.0 26.0 39.0 7.0 41.0 50 30.33492329184339 35.0 26.0 39.0 7.0 40.0 51 29.436538001686447 35.0 23.0 38.0 7.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 0.0 13 5.0 14 3.0 15 6.0 16 9.0 17 21.0 18 38.0 19 58.0 20 126.0 21 224.0 22 346.0 23 576.0 24 1035.0 25 1893.0 26 2768.0 27 3102.0 28 2994.0 29 2751.0 30 2624.0 31 2685.0 32 2920.0 33 3350.0 34 4531.0 35 6990.0 36 8999.0 37 9541.0 38 13178.0 39 8678.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.393420340561562 4.545854990749714 34.22354229331589 40.83718237537284 2 45.16279245378003 4.89698830814151 33.814516027536904 16.125703210541552 3 16.51081717155191 5.396629623569981 61.457140340058146 16.635412864819966 4 13.169387215726747 4.976276476584819 62.833985677787986 19.02035062990045 5 10.786966535358747 6.103930427778547 63.47206665240319 19.63703638445952 6 14.741306618674251 7.056646991454498 66.64736901720427 11.554677372666976 7 54.30484412952919 2.9890380960771235 37.91610556653284 4.790012207860856 8 52.46485520470191 3.6661338837358572 37.48190845362901 6.387102457933222 9 47.91396604452723 5.531293655687982 39.98892482726506 6.565815472519727 10 23.880841209710912 16.923619064399613 44.60777527467687 14.587764451212607 11 15.430987829895415 15.243465018815208 48.99631247089621 20.329234680393167 12 13.944649307172433 13.000742539990185 54.919012799375764 18.13559535346162 13 17.03688787646148 14.13217211825264 55.557093773990964 13.273846231294915 14 15.203191663415433 15.905458298199026 54.02922335351196 14.86212668487358 15 10.92666473690172 15.42091949104547 56.23544810400594 17.41696766804687 16 10.786966535358747 14.709843059768177 53.1960683136791 21.30712209119398 17 10.995884566495086 15.108800986697208 51.862013416061515 22.033301030746188 18 12.088299331714008 13.8880149011415 54.85734422391986 19.16634154322464 19 12.321129667618964 16.384962935927607 54.67233849755213 16.62156889890129 20 12.863561423159698 18.891979309563663 52.71530513359427 15.529154133682368 21 12.413003259624702 19.93027675346414 52.22447361465951 15.43224637225166 22 10.520155555835231 18.460299281372315 50.92188227594799 20.097662886844457 23 10.847376568458412 19.283385982355234 48.77858464326617 21.090652805920183 24 12.312319871125263 18.706973583195943 48.524359087305086 20.45634745837371 25 11.457769611236266 20.093887259775727 46.8681173464893 21.58022578249871 26 11.74471726845967 20.480259763142328 48.32928502208742 19.445737946310583 27 12.415520344337189 19.849730042664586 49.543778395861914 18.190971217136312 28 11.04748480310105 18.699422329058486 49.746403715217035 20.50668915262343 29 13.281397485432372 17.658607800445523 47.66099903092238 21.39899568319972 30 17.354040550234718 19.433152522748152 45.24459770693583 17.968209220081302 31 16.870760285437406 24.712737707187536 40.48604905798104 17.930452949394013 32 15.313943390764816 25.690625117988347 38.82477314774029 20.17065834350655 33 17.50129000591515 22.340385365669484 37.893451804120474 22.2648728242949 34 18.885686597782446 22.19691153705778 37.257887914217754 21.65951395094202 35 20.623733591754032 22.795977698629446 34.742061744088 21.838226965528527 36 21.907446795121892 24.56422970915086 33.62573467410046 19.902588821626793 37 18.272776470292108 28.339856777879856 34.08510263412915 19.30226411769888 38 16.179820531860003 33.166366714071756 32.72587688938671 17.927935864681526 39 20.22855129189373 29.16294347886278 33.42688498181406 17.18162024742943 40 23.252828573945656 25.498068137483166 34.13418578602263 17.11491750254855 41 22.433517500031463 25.92219691153706 32.2690260140705 19.375259574360975 42 23.386234063707416 25.422555596108587 33.239362170733855 17.951848169450145 43 21.359980870156186 23.25031148923317 36.92814981688209 18.46155782372856 44 18.308015656266914 23.37239009778874 36.4952112463345 21.824382999609853 45 21.213989956832 21.727475238179142 34.74080320173176 22.31773160325711 46 22.751928716160943 22.140277131026846 37.950086210151404 17.15770794266081 47 17.825993933825842 24.783216079137144 40.44200007551254 16.94878991152447 48 17.122468756686008 23.809104295405064 40.877455730772624 18.190971217136312 49 21.263073108725475 18.951130800307084 42.0768465962722 17.708949494695243 50 20.004530752482474 16.9085165561247 39.883207269340645 23.20374542205218 51 17.824735391469602 16.562417408157874 37.65684584114678 27.956001359225745 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 320.0 1 472.5 2 625.0 3 5373.0 4 10121.0 5 6170.0 6 2219.0 7 2028.5 8 1838.0 9 1756.5 10 1675.0 11 1574.0 12 1473.0 13 1403.0 14 1333.0 15 1206.5 16 1080.0 17 973.0 18 866.0 19 789.5 20 713.0 21 662.0 22 611.0 23 580.0 24 549.0 25 490.5 26 458.5 27 485.0 28 464.5 29 444.0 30 479.0 31 514.0 32 537.0 33 560.0 34 638.5 35 717.0 36 792.0 37 867.0 38 1017.0 39 1167.0 40 1426.0 41 1685.0 42 2206.0 43 2727.0 44 3239.0 45 3751.0 46 4941.5 47 6132.0 48 7595.5 49 9059.0 50 9231.5 51 9404.0 52 7754.0 53 6104.0 54 4649.5 55 3195.0 56 2606.0 57 2017.0 58 1737.0 59 1457.0 60 1407.5 61 1358.0 62 1245.0 63 1132.0 64 1009.0 65 886.0 66 765.5 67 645.0 68 535.0 69 425.0 70 377.5 71 330.0 72 276.5 73 223.0 74 194.5 75 114.5 76 63.0 77 52.0 78 41.0 79 37.0 80 33.0 81 19.5 82 6.0 83 7.0 84 8.0 85 4.0 86 0.0 87 0.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 79457.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.1953635299596 #Duplication Level Percentage of deduplicated Percentage of total 1 81.61196117143797 49.94273632279094 2 10.527722935176046 12.884956643215828 3 3.8047054952286934 6.984910077148647 4 1.5301085883514314 3.7454220521791664 5 0.7815070746956235 2.3912304768616988 6 0.4113195129976966 1.5102508274915991 7 0.2591312931885489 1.1100343582063255 8 0.16452780519907864 0.8054671079955197 9 0.13779203685422836 0.7589010408145286 >10 0.719809147745969 7.542444340964296 >50 0.030848963474827244 1.2107177467057653 >100 0.018509378084896347 2.7020904388537197 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.002056597564988483 8.410838566771965 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6683 8.410838566771965 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCC 380 0.47824609537233975 No Hit CCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 338 0.4253873164101338 No Hit CTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGCT 295 0.3712699950916848 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 253 0.31841121612947887 No Hit TCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 232 0.29198182664837585 No Hit GCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 208 0.26177681009854387 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGC 194 0.24415721711114188 No Hit TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 142 0.1787130145865059 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA 105 0.13214694740551494 No Hit CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 95 0.11956152384308494 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0012585423562429994 0.0 0.0 0.4266458587663768 0.0 2 0.0012585423562429994 0.0 0.0 1.604641504209824 0.0 3 0.0012585423562429994 0.0 0.0 2.17350264923166 0.0 4 0.0012585423562429994 0.0 0.0 3.0997898234265073 0.0 5 0.0012585423562429994 0.0 0.0 4.982569188366035 0.0 6 0.0012585423562429994 0.0 0.0 6.397170796783166 0.0 7 0.0012585423562429994 0.0 0.0 7.797928439281624 0.0 8 0.0012585423562429994 0.0 0.0 9.887108750645003 0.0 9 0.0012585423562429994 0.0 0.0 10.807103213058635 0.0 10 0.0012585423562429994 0.0 0.0 12.994449828208968 0.0 11 0.0012585423562429994 0.0 0.0 18.217400606617417 0.0 12 0.0012585423562429994 0.0 0.0 23.016222610971973 0.0 13 0.0012585423562429994 0.0 0.0 24.559195539725888 0.0 14 0.0012585423562429994 0.0 0.0 25.076456448141762 0.0 15 0.0012585423562429994 0.0 0.0 25.97757277521175 0.0 16 0.0012585423562429994 0.0 0.0 27.835181293026416 0.0 17 0.0012585423562429994 0.0 0.0 30.240255735806787 0.0 18 0.0012585423562429994 0.0 0.0 32.398655876763534 0.0 19 0.0012585423562429994 0.0 0.0 33.6358030129504 0.0 20 0.0012585423562429994 0.0 0.0 34.74835445586921 0.0 21 0.0012585423562429994 0.0 0.0 35.98046742263111 0.0 22 0.0012585423562429994 0.0 0.0 37.035125917162745 0.0 23 0.0012585423562429994 0.0 0.0 37.839334482802016 0.0 24 0.0012585423562429994 0.0 0.0 38.264721799212154 0.0 25 0.0012585423562429994 0.0 0.0 38.542859659941854 0.0 26 0.0025170847124859987 0.0 0.0 38.76184602992814 0.0 27 0.0025170847124859987 0.0 0.0 38.93426633273343 0.0 28 0.0025170847124859987 0.0 0.0 39.11172080496369 0.0 29 0.0025170847124859987 0.0 0.0 39.272814226562794 0.0 30 0.0025170847124859987 0.0 0.0 39.466629749424214 0.0 31 0.0025170847124859987 0.0 0.0 39.61010357803592 0.0 32 0.0025170847124859987 0.0 0.0 39.769938457278776 0.0 33 0.0025170847124859987 0.0 0.0 39.86936330342198 0.0 34 0.0025170847124859987 0.0 0.0 40.00402733553998 0.0 35 0.0025170847124859987 0.0 0.0 40.15253533357665 0.0 36 0.0025170847124859987 0.0 0.0 40.30356041632581 0.0 37 0.0025170847124859987 0.0 0.0 40.43067319430635 0.0 38 0.0025170847124859987 0.0 0.0 40.556527429930654 0.0 39 0.0025170847124859987 0.0 0.0 40.694967089117384 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATGGG 35 1.1929478E-7 45.0 3 TGATGGG 20 6.993666E-4 45.0 3 CTGGGTT 20 6.993666E-4 45.0 5 ACTTTTG 20 6.993666E-4 45.0 1 GCTCTTG 20 6.993666E-4 45.0 1 CCGGGAC 20 6.993666E-4 45.0 5 TTTATGG 35 1.1929478E-7 45.0 2 TATGGGC 20 6.993666E-4 45.0 4 ATGGGGC 25 3.858003E-5 44.999996 5 CTTTGCG 25 3.858003E-5 44.999996 1 AGCTGGG 25 3.858003E-5 44.999996 3 CGTTTTT 2235 0.0 44.395973 1 TTTGTTG 60 3.6379788E-12 41.250004 1 TTGTTGG 55 5.820766E-11 40.909092 2 GTTTTTT 2550 0.0 40.5 2 TGTCTTG 45 1.8897481E-8 40.000004 1 CTTGGGC 90 0.0 40.000004 4 TTGGGAC 85 0.0 39.705883 5 TATTGGG 40 3.4043478E-7 39.375 3 TTGGGCT 190 0.0 39.07895 5 >>END_MODULE