SRR2933667.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2933667.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	80660
Sequences flagged as poor quality	0
Sequence length	51
%GC	37

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6741	8.357302256384825	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCC	373	0.4624349119761964	No Hit
CCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC	339	0.42028266798909003	No Hit
CTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGCT	311	0.38556905529382596	No Hit
GCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC	216	0.26779072650632285	No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	203	0.25167369204066453	No Hit
TCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC	203	0.25167369204066453	No Hit
CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGC	195	0.2417555169848748	No Hit
TGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	158	0.19588395735184727	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	105	0.13017604760724028	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	91	0.11281924125960824	No Hit
GCCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTG	88	0.10909992561368709	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATTGGGA	30	2.1404048E-6	45.000004	4
TGGGCGA	70	0.0	45.000004	6
TGTCGGG	30	2.1404048E-6	45.000004	3
TTGTCGG	25	3.8585255E-5	45.0	2
GAGAACC	20	6.994298E-4	45.0	7
TGCATGG	20	6.994298E-4	45.0	2
CATTGGG	20	6.994298E-4	45.0	3
CTGAGAA	20	6.994298E-4	45.0	5
ACATGGG	20	6.994298E-4	45.0	3
CTGGGCG	25	3.8585255E-5	45.0	5
CGGGGAC	20	6.994298E-4	45.0	6
GCGCGAC	25	3.8585255E-5	45.0	9
TCAGACG	20	6.994298E-4	45.0	22
GGGACCC	20	6.994298E-4	45.0	7
TGGGCTC	20	6.994298E-4	45.0	6
TGTGGGC	20	6.994298E-4	45.0	4
TGGGCGC	20	6.994298E-4	45.0	6
GGGGTAC	20	6.994298E-4	45.0	7
GGGAAGA	25	3.8585255E-5	45.0	7
GGGCGCG	25	3.8585255E-5	45.0	7